Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d045454_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:9:22857763:22860155:-1 gene:Zm00001d045454 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger (C3HC4-type RING finger) family protein
Sequence	ATGGAGATCTTCCAAGTGACGACGATGATCCTGCAGCATCCGTTACTCACATACTTCTTC TCTGCACTCCTGCTCACACAGCTGCTGACGGCGCCTATTGCGGCGGCGGAGACAACGGTG AAAGTGAGCACCACCCCTATCTTCCCCGAGATCCCACAAGGCCAGGCGAGAAAGGACTTC CAAGTGCTGGTGCGCGTCGAGGCGCCGGCGCGTCCAGAGGCGCGCATCCCCATCGACGTC GTCGCCGTCCTCGATGTCAGCGGCAGCATGAACAACCCGGCGGCAGCGCCGACGGAGAGA ACGAGAACGACGTCGAGGCTGGACCTGCTGAAGACGGCCGCCAAGTTCATGGTCGCGAAA CTCGAGGACGGAGACCGCCTCTCCATCGTCGCGTTCAGCGATCGGCCAGTCAGAGAACTG AGCTCCGGCTTGCTGTACATGACTGCCGACGGCCGGAGGAACGCCATTAGGAGCTTGGAC CAGCTGGAGGCCCGCGGCGGCACTGCGCTCGTGCCGGCCTTCGAGGAGGCGGTGAAGGTC CTGGACGGGCGGCAGGGAGACGGCGGGGACCGCCTGGGCTTCATCGTCCTCCTCACGGAC GGCGCCGAGGACGCGAGCGGGTCGTTCACGTTGAGCGAGCGCCGCCGCGAGGTGATCCGA GGCGCCCTCCGCAAGTACCCCGTCCACGCGTTCGGCCTCGGCACGGCGCACGGCCCCGAG GTCCTGCTGTACCTGGCCCAAGAGTCCCGCGGCACCTACTCCTTCGTCGACGGCGACAAC GTCGGCGAGGTGGCCGGCGCCCTCGCCGTGTGCCTCGGCGGGCTGACCACCGTGGCCGCC GTGGACACGCGCGTGGTCCTCAGGGCCGACGAGCTGAACGGGGTGCGCGTAGACCGCGTC GACTCCGGCGGCCACGACAGCAGCGTCAGCTGCGGCGGGACCTCATGCGAGGTCTCCGTG GGCGTCCTGTACGCCGGCGAGGCCAAGCATTTCGTGGTCCACCTCCACGTGCCAGCTATT ACTGCGACGGCCTCGGCGTCAACGGAGGGCGGTTACTACTGCGACGGCCTCGGCGTGTGT GACCACTACCGCCACCACCGCCACCACCGCCACGGGCAGCACCTGCTCGCCGTCGGCTAC TCGTACCGCAGCCATCCGAGCGCCCGGGCGATCACGGTAGAAGCGCACGGCGTGTTCGTG CAGCGGTCACCGGCGGTGTTAGACTTAGACGGCGGGCGGCACGCTCCTGTTATTCCCTCC CCCTCCCCCGTGGTCCTGCAGCACATCGTCCGGTTCGAGCTGCTGGAAGTGGTGGCAAAC AGCCTCGTCCGCGGCGAGCTGATCAGCAACGACGACAGAGCGCGTGCCGCGGACGTGCTG CAGGTCAAGTGGGAGGAGTTCAGGGCGTGCCACCAGTTCTGGGGCGGCGGGCTCCTCGAC CTGATGAGCGGCCTGGAGAAGGAGGTGGACGGCATGGTGGGCAGCCTCAGGGCGGGGGTG GCGGCGTACGTCTACGCCTGGGTATCGAGCCACCAGATGCAGCGGGCCACCAGCATCGGC TCGCCGGACAAGGCGGCCGTCGAGTTCCTGACGCCGGCGATGCGGCTCCTGTTGGAGGAG GCGCGAAAGCTGCCGCGCTGGCAGCAGGCTGCAACGACGACGGCGGCGCCCACGAACGTC CAGTACGCGGGCTGCGTCGGCGGCGGCGGCTTCGAGATGGTGGACCGGAGGCTGGAGCTG TGGTCCAAGATGAAGCGCGACGTGCAGCTCCTCGTGTCGGTCCAGGAGCAGGCGGCGGCG GACGAAGAGGAGCAGCACCTCGCCGCCGTCTTCCAGGAGGCGTCGCTGGCGGCCATCGAC CGCGCGATGCACCGCGACATTTACCTGGCCGCGGTTTATGCGAGCAAGCAGACGCGATGC CACTCGGTCGGGTGCCAACAAGTGAAGGACTGA

Peptide Sequence

PEP ID	Zm00001d045454_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:9:22857763:22860155:-1 gene:Zm00001d045454 transcript:Zm00001d045454_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger (C3HC4-type RING finger) family protein
Sequence	MEIFQVTTMILQHPLLTYFFSALLLTQLLTAPIAAAETTVKVSTTPIFPEIPQGQARKDF QVLVRVEAPARPEARIPIDVVAVLDVSGSMNNPAAAPTERTRTTSRLDLLKTAAKFMVAK LEDGDRLSIVAFSDRPVRELSSGLLYMTADGRRNAIRSLDQLEARGGTALVPAFEEAVKV LDGRQGDGGDRLGFIVLLTDGAEDASGSFTLSERRREVIRGALRKYPVHAFGLGTAHGPE VLLYLAQESRGTYSFVDGDNVGEVAGALAVCLGGLTTVAAVDTRVVLRADELNGVRVDRV DSGGHDSSVSCGGTSCEVSVGVLYAGEAKHFVVHLHVPAITATASASTEGGYYCDGLGVC DHYRHHRHHRHGQHLLAVGYSYRSHPSARAITVEAHGVFVQRSPAVLDLDGGRHAPVIPS PSPVVLQHIVRFELLEVVANSLVRGELISNDDRARAADVLQVKWEEFRACHQFWGGGLLD LMSGLEKEVDGMVGSLRAGVAAYVYAWVSSHQMQRATSIGSPDKAAVEFLTPAMRLLLEE ARKLPRWQQAATTTAAPTNVQYAGCVGGGGFEMVDRRLELWSKMKRDVQLLVSVQEQAAA DEEEQHLAAVFQEASLAAIDRAMHRDIYLAAVYASKQTRCHSVGCQQVKD

Transcript Sequence

Transcript ID	Zm00001d045454_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:22857763:22860155:-1 gene:Zm00001d045454 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger (C3HC4-type RING finger) family protein
Sequence	ATCCAACCGCACAAGAATTGCATCATCATCGTTAGCTGCCACAGATGGAGATCTTCCAAG TGACGACGATGATCCTGCAGCATCCGTTACTCACATACTTCTTCTCTGCACTCCTGCTCA CACAGCTGCTGACGGCGCCTATTGCGGCGGCGGAGACAACGGTGAAAGTGAGCACCACCC CTATCTTCCCCGAGATCCCACAAGGCCAGGCGAGAAAGGACTTCCAAGTGCTGGTGCGCG TCGAGGCGCCGGCGCGTCCAGAGGCGCGCATCCCCATCGACGTCGTCGCCGTCCTCGATG TCAGCGGCAGCATGAACAACCCGGCGGCAGCGCCGACGGAGAGAACGAGAACGACGTCGA GGCTGGACCTGCTGAAGACGGCCGCCAAGTTCATGGTCGCGAAACTCGAGGACGGAGACC GCCTCTCCATCGTCGCGTTCAGCGATCGGCCAGTCAGAGAACTGAGCTCCGGCTTGCTGT ACATGACTGCCGACGGCCGGAGGAACGCCATTAGGAGCTTGGACCAGCTGGAGGCCCGCG GCGGCACTGCGCTCGTGCCGGCCTTCGAGGAGGCGGTGAAGGTCCTGGACGGGCGGCAGG GAGACGGCGGGGACCGCCTGGGCTTCATCGTCCTCCTCACGGACGGCGCCGAGGACGCGA GCGGGTCGTTCACGTTGAGCGAGCGCCGCCGCGAGGTGATCCGAGGCGCCCTCCGCAAGT ACCCCGTCCACGCGTTCGGCCTCGGCACGGCGCACGGCCCCGAGGTCCTGCTGTACCTGG CCCAAGAGTCCCGCGGCACCTACTCCTTCGTCGACGGCGACAACGTCGGCGAGGTGGCCG GCGCCCTCGCCGTGTGCCTCGGCGGGCTGACCACCGTGGCCGCCGTGGACACGCGCGTGG TCCTCAGGGCCGACGAGCTGAACGGGGTGCGCGTAGACCGCGTCGACTCCGGCGGCCACG ACAGCAGCGTCAGCTGCGGCGGGACCTCATGCGAGGTCTCCGTGGGCGTCCTGTACGCCG GCGAGGCCAAGCATTTCGTGGTCCACCTCCACGTGCCAGCTATTACTGCGACGGCCTCGG CGTCAACGGAGGGCGGTTACTACTGCGACGGCCTCGGCGTGTGTGACCACTACCGCCACC ACCGCCACCACCGCCACGGGCAGCACCTGCTCGCCGTCGGCTACTCGTACCGCAGCCATC CGAGCGCCCGGGCGATCACGGTAGAAGCGCACGGCGTGTTCGTGCAGCGGTCACCGGCGG TGTTAGACTTAGACGGCGGGCGGCACGCTCCTGTTATTCCCTCCCCCTCCCCCGTGGTCC TGCAGCACATCGTCCGGTTCGAGCTGCTGGAAGTGGTGGCAAACAGCCTCGTCCGCGGCG AGCTGATCAGCAACGACGACAGAGCGCGTGCCGCGGACGTGCTGCAGGTCAAGTGGGAGG AGTTCAGGGCGTGCCACCAGTTCTGGGGCGGCGGGCTCCTCGACCTGATGAGCGGCCTGG AGAAGGAGGTGGACGGCATGGTGGGCAGCCTCAGGGCGGGGGTGGCGGCGTACGTCTACG CCTGGGTATCGAGCCACCAGATGCAGCGGGCCACCAGCATCGGCTCGCCGGACAAGGCGG CCGTCGAGTTCCTGACGCCGGCGATGCGGCTCCTGTTGGAGGAGGCGCGAAAGCTGCCGC GCTGGCAGCAGGCTGCAACGACGACGGCGGCGCCCACGAACGTCCAGTACGCGGGCTGCG TCGGCGGCGGCGGCTTCGAGATGGTGGACCGGAGGCTGGAGCTGTGGTCCAAGATGAAGC GCGACGTGCAGCTCCTCGTGTCGGTCCAGGAGCAGGCGGCGGCGGACGAAGAGGAGCAGC ACCTCGCCGCCGTCTTCCAGGAGGCGTCGCTGGCGGCCATCGACCGCGCGATGCACCGCG ACATTTACCTGGCCGCGGTTTATGCGAGCAAGCAGACGCGATGCCACTCGGTCGGGTGCC AACAAGTGAAGGACTGAGAACTCGATCGACACCAGTAGATTAAGTGGGCATGACGTCAAT AACTAATTGATTACCTACCTAGCCGCTTGTACTAGTCATGCTCTACTTTATATTACTTTA AAAGATACATTTCGTTGTGTAATCATCTTATGGTTCATCATCGTCATGTGCTCCACTATA TACTGTCTCAGATCTATATTCATCA