Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d045383_T018
CDS Infomation

cds chromosome:B73_RefGen_v4:9:20241178:20246182:-1 gene:Zm00001d045383 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:deoxy xylulose synthase3 description: deoxy xylulose synthase3
Sequence

ATGGGAATCGATCGATCACTCCGCTTATTCCAGTCCAGGTTCCCAGACAGATTTTTTGAC
TTGGGCATCGCTGAGCAACATGCTGTTACCTTTTCTGCTGGTTTGGCATGCGGAGGTCTA
AAGCCTTTCTGCATAATTCCATCCACATTTCTTCAGCGAGCATATGATCAGATAATTGAA
GATGTGGACATGCAAAAGATACCAGTTCGATTTGCTATCACAAATGCTGGTCTGGTAGGA
TCTGAGGGTCCAACTAATTCAGGACCATTTGATATTACATTCATGTCATGCTTGCCAAAC
ATGATTGTCATGTCACCATCTAATGAGGATGAACTTATTGACATGGTGGCAACAGCTGCA
ATGATTGAGGACAGACCTATTTGCTTCCGCTATCCTAGGGGTGCCATTGTTGGGACTAGT
GGAAGTGTAACATATGGGAATCCATTTGAGATTGGTAAAGGAGAGATTCTTGTCGAGGGA
AAAGAGATAGCTTTTCTTGGCTATGGCGAGGTGGTCCAGAGATGCTTGATTGCTCGATCT
CTTTTATCCAACTTTGGCATTCAGGCGACAGTTGCAAATGCGAGGTTTTGCAAGCCGCTT
GACATCGACCTAATCAGAACGCTGTGCCAGCAGCATAGTTTTCTTATCACAGTGGAAGAA
GGAACGGTTGGTGGCTTTGGATCACATGTCTCACAGTTTATTTCTCTCGATGGTCTACTT
GACGGTCGAACAAAGTGGCGACCCATTGTGCTGCCAGACAGGTACATTGAGCATGCATCG
CTCGCAGAGCAACTTGACCTGGCTGGCCTAACTGCTCATCACATAGCTGCAACTGCATTG
ACCCTCCTAGGGCGTCATCGTGATGCCCTTCTGTTGATGAAGTAG

Peptide Sequence

PEP ID

Zm00001d045383_P018
PEP Infomation

pep chromosome:B73_RefGen_v4:9:20241178:20246182:-1 gene:Zm00001d045383 transcript:Zm00001d045383_T018 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:deoxy xylulose synthase3 description: deoxy xylulose synthase3
Sequence

MGIDRSLRLFQSRFPDRFFDLGIAEQHAVTFSAGLACGGLKPFCIIPSTFLQRAYDQIIE
DVDMQKIPVRFAITNAGLVGSEGPTNSGPFDITFMSCLPNMIVMSPSNEDELIDMVATAA
MIEDRPICFRYPRGAIVGTSGSVTYGNPFEIGKGEILVEGKEIAFLGYGEVVQRCLIARS
LLSNFGIQATVANARFCKPLDIDLIRTLCQQHSFLITVEEGTVGGFGSHVSQFISLDGLL
DGRTKWRPIVLPDRYIEHASLAEQLDLAGLTAHHIAATALTLLGRHRDALLLMK

Transcript Sequence

Transcript ID

Zm00001d045383_T018
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:20241178:20246182:-1 gene:Zm00001d045383 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:deoxy xylulose synthase3 description: deoxy xylulose synthase3
Sequence

GTTCGGATCAGCCTCTCTGTCATGTCGCCAATACAGCGCAGCGCTCCGCATCCACCCAAA
TCGGAGTAGGGTCGTCAGTACAGCGCGACGCCCTGCCAGTAGCCGCCGCAACCGGCCGCC
GGTCCCGCGCGAGGGGAGGAGGAGATCACTGCGGCGGCGTCTTCTGCCGGTTTGAGGATT
CGGGGCATCACTGCAGCAGCTGGCGCCAGGCTCCAGCATGGACACGGCGTTTCTGAGTCC
TCCGCTTGCCCGTAATCTGGTTTATGACGAGTTTGCCGTTCTTCACCCCACTAGCTACCC
TTTTCATACTCTTCGGTATTTGAGATGCAATCCAATGTATTCGAGACCGCTGCTAACAAT
AGCACCAGCCTCACCATCAAGGGGCTTGATTCAGAGAGTGGCCGCACTACCTGATGTTGA
TGATTTCTTCTGGGAGAAGGATCCTACTCCAATACTTGACACAATTGATGCACCCATTCA
TTTGAAAAATCTATCTAGAGCTCAAGCAGTTAGCCGATGAAGTTCGTTCAGAAATAGCTT
TCATAATGTCCAGAAAATGCCAACCGTGTGGTGCTGATCGCTCAGTTGTGGAGCTGACAA
TTGCTATACATTATGTGTTCAATGCCCCAATGGATAAGATACTATGGGATGCTGGTCAAC
ATGCATATGCGCACAAGATTCTCACAGGAAGGCGCTCTCTCTTCCATACTATTACACAGA
AAAATGGCCTTTCTGGGTTCACGTCGCGTTTTGAGAGCGAGTATGATCCCTTTGGTGCTG
GACATGGATGCAATAGTCTATCCGCTGGCCTTGGGATGGCGGTTGCAAGGGATATAAATG
GGAGAAAAAATCGAATAGTGACAGTTATAAGTAATTGGACAACCATGGCTGGCCAGGTGT
ACGAGGCAATGGGTCATGCTGGCTTCCTCGATTCCAACATGGTGGTTATTCTAAATGATA
GCTGTCATACCTTGCTTCCTAAAGCAGATGGCGGGGCAAAGATGTCAGTCAATGCCTTTT
CTAGTGCTCTAAGCAAGATTCAATCCAGCAAAGGATTTAGGAGGTTTAGAGAGGCTGCTA
AGGGACTTGCCAAATGGTTTGGCAAAGGAATGCACGAATTTGCTGCCAAAGTTGATGAGT
ATGCTCGTGGTATGATAGGTCCTCATGGTGCAACTCTTTTTGAAGAACTTGGATTATATT
ATATTGGTCCTATTGATGGACGTAACATTGATGATCTCATCTGTGTACTTAAGGAAGTTG
CGAGCTTAGATTCAACTGGCCCAGTACTTGTACATGTAATTACTGGGACTGAAAATGACA
CTGGTGGAATTATTGGAAGTGAAATAAATGCAGTTGAGGAAGGTTTGTAATGTAGATTGC
TATCAAAATTTGCATGGTGTTTTACTTTTCTTTTGCTGAACTAGGACTCTAGGAGGCATG
CCTAGTGTTTTTTTTTTTTTTGCTCTCTTGCTCTGTTACCTCTGCACTGGGGTTCCTCAT
CTAGGGGAGGAAGAACCATGGCAATATGACTACATGAGGGAGTGTCAGTGCTCATGGCAA
ACAAACTTCTTTAAAAATATGTATATGTCATTATTAGCATCTGTGCGATCAATTTCACAA
CTTTTACAGGTCTGTTTAAGTTTCCACATTCTAATAAGTACACTAAGAGTCTACGGTTAC
TAATGTACTGCTGCTTTTGCAGTCGTGTTACATTATTGTCCTCTTAGAACCATTACTAGC
TGTATTTTTCTCGCGTGCAGAAGAACCGCGCCTCATTATATTAAGATAGGAGAAAAAAGG
TCTAATATAGACCAAAACAGATACAAAGACTGAGGCCTATATATTGAATGAGTACTTTAT
GGATTAACCTTATTTTTTACTGACAACAGGGCCTTCAAACTCAAGCCCTGATCTTCTAAA
GTTTTTAGGAACTGGACTTTCTAGGACATATAATGACTGCTTTGTAGAAGCACTAACAGC
AGAAGCAGAGAATGACAAGCGCATTGTGGTAGTTCATGGCGGCATGGGAATCGATCGATC
ACTCCGCTTATTCCAGTCCAGGTTCCCAGACAGATTTTTTGACTTGGGCATCGCTGAGCA
ACATGCTGTTACCTTTTCTGCTGGTTTGGCATGCGGAGGTCTAAAGCCTTTCTGCATAAT
TCCATCCACATTTCTTCAGCGAGCATATGATCAGATAATTGAAGATGTGGACATGCAAAA
GATACCAGTTCGATTTGCTATCACAAATGCTGGTCTGGTAGGATCTGAGGGTCCAACTAA
TTCAGGACCATTTGATATTACATTCATGTCATGCTTGCCAAACATGATTGTCATGTCACC
ATCTAATGAGGATGAACTTATTGACATGGTGGCAACAGCTGCAATGATTGAGGACAGACC
TATTTGCTTCCGCTATCCTAGGGGTGCCATTGTTGGGACTAGTGGAAGTGTAACATATGG
GAATCCATTTGAGATTGGTAAAGGAGAGATTCTTGTCGAGGGAAAAGAGATAGCTTTTCT
TGGCTATGGCGAGGTGGTCCAGAGATGCTTGATTGCTCGATCTCTTTTATCCAACTTTGG
CATTCAGGCGACAGTTGCAAATGCGAGGTTTTGCAAGCCGCTTGACATCGACCTAATCAG
AACGCTGTGCCAGCAGCATAGTTTTCTTATCACAGTGGAAGAAGGAACGGTTGGTGGCTT
TGGATCACATGTCTCACAGTTTATTTCTCTCGATGGTCTACTTGACGGTCGAACAAAGTG
GCGACCCATTGTGCTGCCAGACAGGTACATTGAGCATGCATCGCTCGCAGAGCAACTTGA
CCTGGCTGGCCTAACTGCTCATCACATAGCTGCAACTGCATTGACCCTCCTAGGGCGTCA
TCGTGATGCCCTTCTGTTGATGAAGTAGGGGAAGGAACCACCAAGAAGAATGGAATTGGA
TAGATAAAAGGCAATATGTGCAAAAGTTGATTCGGAGGACGCTCATCATGCTGTTTTACG
ATTGTGTTGTCTGGATAGAACTGAAGCGTGCCGTGGGAGGTGGCCAAATGCACAAATCCC
AAAGAGGGACGACAAAGCCTATAGCACCATAGATTAATAGTCACGGTGTATATACTAAAA
AGAATTTACAGAGCACCGATGTAACGTTGTTACTGTGCATGTTAATACTGAAATTGTGGT
ACGACGCCAACTAGGAGAATGAGCTGGAGCTGACATGTTTCAGTTAATGTAATAAAGCTA
CTTAGTTT