Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d045381_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:9:20209972:20216897:1 gene:Zm00001d045381 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA-repair protein XRCC1
Sequence	ATGTCCGGTTCCAAGAGAAGCCTCCCCCCTTGGATGAGTTTTTCTAAAGATGGAGAGGAC GATTCACGCAAGAAGAAGCATGCAGGCACCTCCCAAAAGGCCCAGAAAGGGCCCGATTTC TCCAAACTTTTGGACGGGGTGGTGTTTGTGCTGTCAGGGTTCGTGAACCCGGAGAGGAGC ACGCTTCGTTCACAAGCATTGGACATGGGAGCCGAATATCGAGCCGATTGGACATCAGAC TGCACCCTTCTTGTTTGTGCATTTGTCAACACCCCCAAGTTTCGACAGGTTCAGGCGGAT AATGGAACCATTATCTCAAAGGACTGGATCTTTGAGTCTCACAAGCAAAGAAAACTTGTG GACATTGAACCTTTCCTTATGCATGCTGGAAAACCATGGCGAAAAAATAAGGAGCCCATC AAAACTGATCAAGATGAGAAGGAAACATGCAAAGAGCATCAAAAACAAGTTCAACGATCT CGTGTCAAGCCATCCACCTCTGATGCCATGGAGGCAGGAAATTTAGAATCAGCAAACAAA TGTTTTTCTCCCTCAAAAATAAAGCAATGGGCCATGGATGATTTGGCACAGACTATGTCA TGGCTGGACAGCCAAGAAGAGAAGCCAGAGCCAAGTGAACTGAAGGCTATAGCCTCTGAA GGGGTAATCACTTGTCTTCAAGATGCCATAGAATCCCTCGAGCAAGGCAATGATATCAAG GGAGTTGCAGAGCAGTGGAGCTTCGTCCCCCATGTTGTCAACGAGCTGTTAAAACTAGAT GGAGGCGGAAAAGGTGCGGCTCTGCCCAAAGAGCAGCTACGTCAACTAGCAGGCAAGTGC AAGAAGATCTACCAGGCCGAGTTTGCTCGCACGGACATGGGCGACAAGAACAAGGGTAGG CATCAAAATGACCCACATGTGACCGAGCACCGCAGGAAGACCAATACCAAATCAGAGGAT GACCACTACGATAGCGATGCCACGATAGAAATGACGGAGGAAGAGATTGATTTCGCGTGC AGACGGCTCCCTGGGCTCTATGCGGATGATACATGA

Peptide Sequence

PEP ID	Zm00001d045381_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:9:20209972:20216897:1 gene:Zm00001d045381 transcript:Zm00001d045381_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA-repair protein XRCC1
Sequence	MSGSKRSLPPWMSFSKDGEDDSRKKKHAGTSQKAQKGPDFSKLLDGVVFVLSGFVNPERS TLRSQALDMGAEYRADWTSDCTLLVCAFVNTPKFRQVQADNGTIISKDWIFESHKQRKLV DIEPFLMHAGKPWRKNKEPIKTDQDEKETCKEHQKQVQRSRVKPSTSDAMEAGNLESANK CFSPSKIKQWAMDDLAQTMSWLDSQEEKPEPSELKAIASEGVITCLQDAIESLEQGNDIK GVAEQWSFVPHVVNELLKLDGGGKGAALPKEQLRQLAGKCKKIYQAEFARTDMGDKNKGR HQNDPHVTEHRRKTNTKSEDDHYDSDATIEMTEEEIDFACRRLPGLYADDT

Transcript Sequence

Transcript ID	Zm00001d045381_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:20209972:20216897:1 gene:Zm00001d045381 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA-repair protein XRCC1
Sequence	TAGTAAAAACTTAAGAAAAAGAGAACGAAGCCCCTGCTGCCAGCAGGACCCTGCGGGCGC GCTCCCGTAGGCCGAATACCCCCGACTGGGCAATCGCCGCCGCCGTTCTCTCCGTTGTCT GTCTCTCGGCAAGGCAGCAACTGTGCTACCGCCGCCGCGGTGCCCAGTTCTTCGCCGCGC CCTCGGCCCTTCGGCGGCAGCTAGCACCCAGCAGGAGACTGGTGCAGTTCGGTTTCCCAA TAAAATGTCCGGTTCCAAGAGAAGCCTCCCCCCTTGGATGAGTTTTTCTAAAGATGGAGA GGACGATTCACGCAAGAAGAAGCATGCAGGCACCTCCCAAAAGGCCCAGAAAGGGCCCGA TTTCTCCAAACTTTTGGACGGGGTGGTGTTTGTGCTGTCAGGGTTCGTGAACCCGGAGAG GAGCACGCTTCGTTCACAAGCATTGGACATGGGAGCCGAATATCGAGCCGATTGGACATC AGACTGCACCCTTCTTGTTTGTGCATTTGTCAACACCCCCAAGTTTCGACAGGTTCAGGC GGATAATGGAACCATTATCTCAAAGGACTGGATCTTTGAGTCTCACAAGCAAAGAAAACT TGTGGACATTGAACCTTTCCTTATGCATGCTGGAAAACCATGGCGAAAAAATAAGGAGCC CATCAAAACTGATCAAGATGAGAAGGAAACATGCAAAGAGCATCAAAAACAAGTTCAACG ATCTCGTGTCAAGCCATCCACCTCTGATGCCATGGAGGCAGGAAATTTAGAATCAGCAAA CAAATGTTTTTCTCCCTCAAAAATAAAGCAATGGGCCATGGATGATTTGGCACAGACTAT GTCATGGCTGGACAGCCAAGAAGAGAAGCCAGAGCCAAGTGAACTGAAGGCTATAGCCTC TGAAGGGGTAATCACTTGTCTTCAAGATGCCATAGAATCCCTCGAGCAAGGCAATGATAT CAAGGGAGTTGCAGAGCAGTGGAGCTTCGTCCCCCATGTTGTCAACGAGCTGTTAAAACT AGATGGAGGCGGAAAAGGTGCGGCTCTGCCCAAAGAGCAGCTACGTCAACTAGCAGGCAA GTGCAAGAAGATCTACCAGGCCGAGTTTGCTCGCACGGACATGGGCGACAAGAACAAGGG TAGGCATCAAAATGACCCACATGTGACCGAGCACCGCAGGAAGACCAATACCAAATCAGA GGATGACCACTACGATAGCGATGCCACGATAGAAATGACGGAGGAAGAGATTGATTTCGC GTGCAGACGGCTCCCTGGGCTCTATGCGGATGATACATGATACTATCTAGTTGAGATGTC AGGTGTGTGAGGAAGGCTCTGTTAGGTTGTTCCGGATTGGGGCCCTGGATTAATTCCTAG CCGGATTACTTCTCTAATTTATATAGATTTTGATAAGCTGGAATGAATCATGGCTCATTC CGGTACCACCGAAGAGGCCCGAAGGGTACTTGATGTCAGGTGTGTTGTTGTCGGTTGTTT GATAGACGACGGGTATGATGTAGATCTATCGCAACGAGACAAGATCCTCCCTGCTCACTT AACAATACAGAAAGTGAAAAAACACCCTCCAGCAGTTCCTCTTTCCAA