Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d045379_T024
CDS Infomation

cds chromosome:B73_RefGen_v4:9:20174501:20183135:-1 gene:Zm00001d045379 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coatomer subunit beta'-3
Sequence

ATGCCGCTCAGGTTGGAGATCAAGCGGAAGTTCGCTCAACGGTCGGAGAGAGTCAAGTCC
GTGGACTTGCACCCCACGGAGCCATGGATCCTGTCGAGCCTGTACTCGGGGAGTGTCTGC
ATCTGGGATTATCAGGCACAGGCAATGGTGAAATCATTTGAAGTTTCAGAACTGCCAGTG
AGGTCGGCAAAGTTTATTTCAAGGAAACAATGGGTTGTAGCTGGTGCAGACGACATGTTC
ATTCGTGTCTACAACTACAATACCATGGACAAAGTTAAAGTTTTTGAGGCTCATACTGAT
TACATCAGATGTGTTGCGGTCCATCCAACTCTACCATATGTGCTGTCATCATCTGATGAC
ATGCTAATAAAACTGTGGGACTGGGATAAAGGGTGGGTGTGCACTCAAATATTTGAGGGA
CATTCACACTATGTGATGCAGGTTACTTTCAATCCAAAGGATATTAACACCTTTGCAAGT
GCATCCCTTGACCGCACTACAAAGATATGGAGTTTGGGTTCTCCAGATCCAAACTTCACA
CTTGATGGGCATCAAAAGGGTGTCAACTGTGTTGACTACTTCACTGGTGGTGACAGGCCC
TATTTGATTACTGGTTCTGATGACTCCACCGCAAAGGTCTGGGATTACCAGACGAAGAGC
TGTGTTCAGACACTTGAAGGGCATACACATAATATTTCTGCTGTTTGTTTCCATCCTGAG
CTCCCTATAATCATTACTGGATCTGAAGATGGTACAGTTCGTATATGGCATTCGACAACT
TACAGACTTGAGAACACACTAAACTATGGCCTTGAGAGAGTCTGGGCTGTTGGATACATG
AAGGGGTCTAGAAGGATGGTGATTGGTTATGATGAGGGGACCATTATGATAAAAATGGGC
CGTGAAGTACCCATAGCAAGTATGGATACCGGTGGGAAAATCATTTGGGCGAAACATAAT
GAAATACAAACTGTAAATATCAAGACAGTCGGTGCAGGTTTTGAAGCCACAGATGGAGAA
AGATTACCCTTGGCTGTAAAAGAGTTAGGAAGCTGTGATTTGTACCCACAGAGCTTGAAG
CATAACCCTAATGGACGGTTCGTTGTTGTATGTGGAGATGGCGAGTACATAATTTATACT
GCCCTGGCCTGGAGGAATAGATCATTTGGGTCTGCACTGGAATTTGTTTGGTCATCAGAA
GGAGAATATGCAATTAGGGAAAGTACATCAAGAATAAAGATTTTCAATAAATCGTTTCAG
GAGAAGAAAACTATCCGCCCTTCATTTTCAGCAGAGCGTATTTATGGTGGGGTATTGTTG
GCAATGTGTTCTAGTGACTTCATCTGCTTTTATGACTGGGCTGATTGTAGACTAATACGC
CGAATCGATGTGAATGTTAAGAATGTTTACTGGGCTGATAGTGGTGACCTAGTTGCAATA
GCAAGTGATACATCATTCTACATCCTCAAGTACAATAGAGATATTGTTGCTTCTTATCTA
GAAGGTGGAAAGCCTGTGGACGAAGAAGGCGTTGAAGATGCTTTTGAGCTGCTTCATGAG
ATCAATGAGCGAGTGAGAACTGGAATTTGGGTTGGAGACTGCTTTATCTATAACAACTCA
TCGTGGCGCCTAAATTATTGTGTTGGTGGTGAGGTCACTACAATGTATCATTTGGATCGC
CCTATGTACTTGTTGGGATATATTGCGAACCAAAGTCGAGTTTATCTTATTGACAAGGAG
TTGAATGTCATTGGGTACACATTACTTCTGAGTTTGATTGAGTACAAGACCCTTGTGATG
CGTGGGGATTTGGATCATGCAAACAAAATTTTATCATCCATACCTAAGGCGCAATATAAT
AGTGTTGCTCATTTTTTGGAATCGAGAGGTATGTTGGAAGAGGCTCTTGAGATAGCCACT
GATGCTGACTACAAGTTTGACCTAGCTGTGCAGCTTGGAAAATTAGAAGTCGCGAAGGCT
ATCGCCATAGAAGCACAAAGTGAATCTAAATGGAAGCAGTTGGGCGAACTTGCCATGTCC
ACAGGCAAGCTAGAGATGGCAGAGGAATGCCTTCTTCAAGCAAAGGACTTAAGTGGCTTG
TTGCTACTGTACTCATCTCTTGGAGATGCTGAAGGAATTGAAAAGCTTGCTTCTTTGGCA
AAAGAACACGGAAAAAACAATGTTGCTTTCCTCTGCCTTTTTATGCTTGGTAAAGTTGAA
GATTGCATACAGTTGCTTGTAGACAGTAACCGTATACCTGAAGCTGCATTACTGGCGCGT
TCATATCTTCCTAGCAAAGTACCAGAGATAGTGGCAATTTGGAGAGACGACCTGAGTAAA
ATTAATCCAAAAGCTGCAGAGTCTCTAGCAGATCCTTCTGAATATCCAAATCTATTTGAA
GACTGGCAGGTTGCTCTAACTGTAGAAAAAAGTGTTGCGTCTCAGAGGGGCAATTATCTT
CCTGCTGACCAGTACTTGAATCATGCTGAGAAGTCAGACATGACTATTGTGGAAGCTTTC
AAAAGGATGCAGGTTGTTCAGCATGAGGAACCTGAAGATGTGGCTGAGGAAAATGGAGAA
CTTGATCAACAGGTATCTCATATGCAT

Peptide Sequence

PEP ID

Zm00001d045379_P024
PEP Infomation

pep chromosome:B73_RefGen_v4:9:20174501:20183135:-1 gene:Zm00001d045379 transcript:Zm00001d045379_T024 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coatomer subunit beta'-3
Sequence

MPLRLEIKRKFAQRSERVKSVDLHPTEPWILSSLYSGSVCIWDYQAQAMVKSFEVSELPV
RSAKFISRKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWDKGWVCTQIFEGHSHYVMQVTFNPKDINTFASASLDRTTKIWSLGSPDPNFT
LDGHQKGVNCVDYFTGGDRPYLITGSDDSTAKVWDYQTKSCVQTLEGHTHNISAVCFHPE
LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAVGYMKGSRRMVIGYDEGTIMIKMG
REVPIASMDTGGKIIWAKHNEIQTVNIKTVGAGFEATDGERLPLAVKELGSCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSEGEYAIRESTSRIKIFNKSFQ
EKKTIRPSFSAERIYGGVLLAMCSSDFICFYDWADCRLIRRIDVNVKNVYWADSGDLVAI
ASDTSFYILKYNRDIVASYLEGGKPVDEEGVEDAFELLHEINERVRTGIWVGDCFIYNNS
SWRLNYCVGGEVTTMYHLDRPMYLLGYIANQSRVYLIDKELNVIGYTLLLSLIEYKTLVM
RGDLDHANKILSSIPKAQYNSVAHFLESRGMLEEALEIATDADYKFDLAVQLGKLEVAKA
IAIEAQSESKWKQLGELAMSTGKLEMAEECLLQAKDLSGLLLLYSSLGDAEGIEKLASLA
KEHGKNNVAFLCLFMLGKVEDCIQLLVDSNRIPEAALLARSYLPSKVPEIVAIWRDDLSK
INPKAAESLADPSEYPNLFEDWQVALTVEKSVASQRGNYLPADQYLNHAEKSDMTIVEAF
KRMQVVQHEEPEDVAEENGELDQQVSHMH

Transcript Sequence

Transcript ID

Zm00001d045379_T024
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:20174501:20183135:-1 gene:Zm00001d045379 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coatomer subunit beta'-3
Sequence

GGCTCCGCGCCTGGGCCACCGAGCCCGCGATCGGATTCGCTCCCTCTTCGCCGCGCCCCA
CCACCCATCGCCGCTGGGGATCCCTAGGGTTTAGTGCAGTCGCTCGGCTCCGCGCCGTCC
TCGCCGCTGCTGCCACCATGCCGCTCAGGTTGGAGATCAAGCGGAAGTTCGCTCAACGGT
CGGAGAGAGTCAAGTCCGTGGACTTGCACCCCACGGAGCCATGGATCCTGTCGAGCCTGT
ACTCGGGGAGTGTCTGCATCTGGGATTATCAGGCACAGGCAATGGTGAAATCATTTGAAG
TTTCAGAACTGCCAGTGAGGTCGGCAAAGTTTATTTCAAGGAAACAATGGGTTGTAGCTG
GTGCAGACGACATGTTCATTCGTGTCTACAACTACAATACCATGGACAAAGTTAAAGTTT
TTGAGGCTCATACTGATTACATCAGATGTGTTGCGGTCCATCCAACTCTACCATATGTGC
TGTCATCATCTGATGACATGCTAATAAAACTGTGGGACTGGGATAAAGGGTGGGTGTGCA
CTCAAATATTTGAGGGACATTCACACTATGTGATGCAGGTTACTTTCAATCCAAAGGATA
TTAACACCTTTGCAAGTGCATCCCTTGACCGCACTACAAAGATATGGAGTTTGGGTTCTC
CAGATCCAAACTTCACACTTGATGGGCATCAAAAGGGTGTCAACTGTGTTGACTACTTCA
CTGGTGGTGACAGGCCCTATTTGATTACTGGTTCTGATGACTCCACCGCAAAGGTCTGGG
ATTACCAGACGAAGAGCTGTGTTCAGACACTTGAAGGGCATACACATAATATTTCTGCTG
TTTGTTTCCATCCTGAGCTCCCTATAATCATTACTGGATCTGAAGATGGTACAGTTCGTA
TATGGCATTCGACAACTTACAGACTTGAGAACACACTAAACTATGGCCTTGAGAGAGTCT
GGGCTGTTGGATACATGAAGGGGTCTAGAAGGATGGTGATTGGTTATGATGAGGGGACCA
TTATGATAAAAATGGGCCGTGAAGTACCCATAGCAAGTATGGATACCGGTGGGAAAATCA
TTTGGGCGAAACATAATGAAATACAAACTGTAAATATCAAGACAGTCGGTGCAGGTTTTG
AAGCCACAGATGGAGAAAGATTACCCTTGGCTGTAAAAGAGTTAGGAAGCTGTGATTTGT
ACCCACAGAGCTTGAAGCATAACCCTAATGGACGGTTCGTTGTTGTATGTGGAGATGGCG
AGTACATAATTTATACTGCCCTGGCCTGGAGGAATAGATCATTTGGGTCTGCACTGGAAT
TTGTTTGGTCATCAGAAGGAGAATATGCAATTAGGGAAAGTACATCAAGAATAAAGATTT
TCAATAAATCGTTTCAGGAGAAGAAAACTATCCGCCCTTCATTTTCAGCAGAGCGTATTT
ATGGTGGGGTATTGTTGGCAATGTGTTCTAGTGACTTCATCTGCTTTTATGACTGGGCTG
ATTGTAGACTAATACGCCGAATCGATGTGAATGTTAAGAATGTTTACTGGGCTGATAGTG
GTGACCTAGTTGCAATAGCAAGTGATACATCATTCTACATCCTCAAGTACAATAGAGATA
TTGTTGCTTCTTATCTAGAAGGTGGAAAGCCTGTGGACGAAGAAGGCGTTGAAGATGCTT
TTGAGCTGCTTCATGAGATCAATGAGCGAGTGAGAACTGGAATTTGGGTTGGAGACTGCT
TTATCTATAACAACTCATCGTGGCGCCTAAATTATTGTGTTGGTGGTGAGGTCACTACAA
TGTATCATTTGGATCGCCCTATGTACTTGTTGGGATATATTGCGAACCAAAGTCGAGTTT
ATCTTATTGACAAGGAGTTGAATGTCATTGGGTACACATTACTTCTGAGTTTGATTGAGT
ACAAGACCCTTGTGATGCGTGGGGATTTGGATCATGCAAACAAAATTTTATCATCCATAC
CTAAGGCGCAATATAATAGTGTTGCTCATTTTTTGGAATCGAGAGGTATGTTGGAAGAGG
CTCTTGAGATAGCCACTGATGCTGACTACAAGTTTGACCTAGCTGTGCAGCTTGGAAAAT
TAGAAGTCGCGAAGGCTATCGCCATAGAAGCACAAAGTGAATCTAAATGGAAGCAGTTGG
GCGAACTTGCCATGTCCACAGGCAAGCTAGAGATGGCAGAGGAATGCCTTCTTCAAGCAA
AGGACTTAAGTGGCTTGTTGCTACTGTACTCATCTCTTGGAGATGCTGAAGGAATTGAAA
AGCTTGCTTCTTTGGCAAAAGAACACGGAAAAAACAATGTTGCTTTCCTCTGCCTTTTTA
TGCTTGGTAAAGTTGAAGATTGCATACAGTTGCTTGTAGACAGTAACCGTATACCTGAAG
CTGCATTACTGGCGCGTTCATATCTTCCTAGCAAAGTACCAGAGATAGTGGCAATTTGGA
GAGACGACCTGAGTAAAATTAATCCAAAAGCTGCAGAGTCTCTAGCAGATCCTTCTGAAT
ATCCAAATCTATTTGAAGACTGGCAGGTTGCTCTAACTGTAGAAAAAAGTGTTGCGTCTC
AGAGGGGCAATTATCTTCCTGCTGACCAGTACTTGAATCATGCTGAGAAGTCAGACATGA
CTATTGTGGAAGCTTTCAAAAGGATGCAGGTTGTTCAGCATGAGGAACCTGAAGATGTGG
CTGAGGAAAATGGAGAACTTGATCAACAGGTATCTCATATGCAT