Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d045327_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:19066419:19069385:1 gene:Zm00001d045327 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyridoxal-5'-phosphate-dependent enzyme family protein
Sequence

ATGGCGGGAGAGGAGGCCGGGAGGAGGGGCGTTCCCTCTCTGCTGAACCCGCCGTCCGCT
TCCAGCGAGGGGCAGCAGGAGCACATCGCCTCTGATGTCACACAGCTCATCGGATGGACA
CCTCTGGTCGAGCTCAAGCGAATCGCCGCCAAGGAAGGGGTATGCGCGCGCATCGTCGGC
AAGGTGGAGGCGTACCAGCCTCTGTGCTCCGTCAAGGATCGCAGCGCTCTGAGAATGATC
GAAGACGCAGAGGAGAGGGGGCTGATCTCGCCCGGCACCACGACGCTCGTGGAGCCGACG
AGCGGCAACCTGGGGCTGGGCCTGGTCCTCGTCGCCCTCCGCAAGGGCTACAGGTTCGTC
GCGGTCATGCCAGGCCAGTACTCGCTCGACAAGCAGATCCTGCTGACATACATGGGCGCA
GAGCTGTACGTAACAGATCCATCCCTGGGGTTCCCGGGCATAACCGCCAAGGTCGAGGAG
CTCAAGAAGGAGCTGCCCAACGTGCACGTCCTCGACCAGTTCTCCAACAGAGCGAATCCT
GAAGCGCATGTTAGATGGACTGGGCCTGAGATCTGGAAGGACACCGCCGGTAAGGTGGAC
ATATTCGTGGCCGGTTCAGGCTCGGGAGGCACGGTGTCTGGCGTCGGCAAGTACCTCAAG
ACGCAGAACCCCAGCGTCAAGGTCATCTGCGTTGAGCCTGCCGAGAGCCCAGTTGTTTCA
GGCGGGGAACCAGGCAGCCACAAGATCCAGGGAATAGGGCCGGGATTCATACCGGAAGTG
CTGGACACCTCGGTCATCGACGAGGCCGTCACGGTGACCACCGAGGAGGCGATGGCGGGC
GCCCGGAGGCTGGCCAGGGAGGAGGGCCTGCTCGTCGGCATCTCTTCCGGGGCCAACCTG
GCGGCCTGCTTGAAGGTCGCGGCGCGAGAAGAGAGCAAGGGGAAGATGATTGTCACCGTG
TTTCCGAGCGGGGGCGAGAGGTACATGACCTCCGACCTGTTCGCCGCCGCCAGAGAGGAG
TGTATTGCCATGACGTTTTGA

Peptide Sequence

PEP ID

Zm00001d045327_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:19066419:19069385:1 gene:Zm00001d045327 transcript:Zm00001d045327_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyridoxal-5'-phosphate-dependent enzyme family protein
Sequence

MAGEEAGRRGVPSLLNPPSASSEGQQEHIASDVTQLIGWTPLVELKRIAAKEGVCARIVG
KVEAYQPLCSVKDRSALRMIEDAEERGLISPGTTTLVEPTSGNLGLGLVLVALRKGYRFV
AVMPGQYSLDKQILLTYMGAELYVTDPSLGFPGITAKVEELKKELPNVHVLDQFSNRANP
EAHVRWTGPEIWKDTAGKVDIFVAGSGSGGTVSGVGKYLKTQNPSVKVICVEPAESPVVS
GGEPGSHKIQGIGPGFIPEVLDTSVIDEAVTVTTEEAMAGARRLAREEGLLVGISSGANL
AACLKVAAREESKGKMIVTVFPSGGERYMTSDLFAAAREECIAMTF

Transcript Sequence

Transcript ID

Zm00001d045327_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:19066419:19069385:1 gene:Zm00001d045327 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyridoxal-5'-phosphate-dependent enzyme family protein
Sequence

ATCTTTGCGCTTGGGGCAATGACGCAGCTTATGAGGTCATACCGAGGCGCGTCAATTGCT
GGTTGAAAACTATTTCCAAACCCCCTCTTTGGCCCACTGGGCCACTGAGAATTTCTGGAA
GGGCTCCTTTTCCTCGGAGAAGCAATCTTGAGTCCTGGCCTGGGTCTTCGCTGCCAGCAC
GCTTGTGGCCAAGAAACGTTGGGGGCAGTTTGGACCTCGGAGCAGCAGCATCCATGGCGG
GAGAGGAGGCCGGGAGGAGGGGCGTTCCCTCTCTGCTGAACCCGCCGTCCGCTTCCAGCG
AGGGGCAGCAGGAGCACATCGCCTCTGATGTCACACAGCTCATCGGATGGACACCTCTGG
TCGAGCTCAAGCGAATCGCCGCCAAGGAAGGGGTATGCGCGCGCATCGTCGGCAAGGTGG
AGGCGTACCAGCCTCTGTGCTCCGTCAAGGATCGCAGCGCTCTGAGAATGATCGAAGACG
CAGAGGAGAGGGGGCTGATCTCGCCCGGCACCACGACGCTCGTGGAGCCGACGAGCGGCA
ACCTGGGGCTGGGCCTGGTCCTCGTCGCCCTCCGCAAGGGCTACAGGTTCGTCGCGGTCA
TGCCAGGCCAGTACTCGCTCGACAAGCAGATCCTGCTGACATACATGGGCGCAGAGCTGT
ACGTAACAGATCCATCCCTGGGGTTCCCGGGCATAACCGCCAAGGTCGAGGAGCTCAAGA
AGGAGCTGCCCAACGTGCACGTCCTCGACCAGTTCTCCAACAGAGCGAATCCTGAAGCGC
ATGTTAGATGGACTGGGCCTGAGATCTGGAAGGACACCGCCGGTAAGGTGGACATATTCG
TGGCCGGTTCAGGCTCGGGAGGCACGGTGTCTGGCGTCGGCAAGTACCTCAAGACGCAGA
ACCCCAGCGTCAAGGTCATCTGCGTTGAGCCTGCCGAGAGCCCAGTTGTTTCAGGCGGGG
AACCAGGCAGCCACAAGATCCAGGGAATAGGGCCGGGATTCATACCGGAAGTGCTGGACA
CCTCGGTCATCGACGAGGCCGTCACGGTGACCACCGAGGAGGCGATGGCGGGCGCCCGGA
GGCTGGCCAGGGAGGAGGGCCTGCTCGTCGGCATCTCTTCCGGGGCCAACCTGGCGGCCT
GCTTGAAGGTCGCGGCGCGAGAAGAGAGCAAGGGGAAGATGATTGTCACCGTGTTTCCGA
GCGGGGGCGAGAGGTACATGACCTCCGACCTGTTCGCCGCCGCCAGAGAGGAGTGTATTG
CCATGACGTTTTGATCTTTTTTTACCCCCTCCCCCCAGAAAAAAGGGGAAAACAAATACG
CGTGTATCTTTATCTTCACATGGTATTGGTTTACCATGCATGTACATTTAAAAATATTTT
TCCCCGAAACGGAATAGAACAGCTGCGTGCTTGTTTACACATC