Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d045309_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:18678409:18682507:-1 gene:Zm00001d045309 gene_biotype:protein_coding transcript_biotype:protein_coding description:GW2
Sequence

ATGGGGAACCAGGTCGGGGGCCGACGGCGGCGGCGGCCGCCGGTGGACGAGCGCTACACG
CGCCCGCAGGGGCTGTACCCGCACCCGGACATCGACCTCAGGAAGCTCCGCCGCCTCATC
CTCGAGGCCAAGCTCGCGCCCTGCCACCCTGGCGCCGACGACGCGCGCGCCGACCTCGAC
GAGTGCCCCATCTGCTTCCTGTTCTACCCCAGCCTCAACCGCTCCAAGTGCTGCGCCAAG
GGAATTTGCACGGAGTGCTTCCTCCAGATGAAGTCGCCCACCTCGTGCAAACCGACGCAG
TGTCCGTATTGCAAGACGCTGAATTACGCAGTGGAGTACCGGGGCGTGAAGACCAAGGAG
GAGAAGGGCATAGAGCAGCTTGAGGAGCAGAGGGTGATCGAGGCGCAGATCAGGATGCGG
CAGCAGGAGGTACAGGACGATGCAGAGCGGATGAAGAACAAGCGGACTGCAACTTTGGGT
GACGTAGTAGCATCAGCACAGGTCGATTCTTGCAATACCGATGGTGCATCAACTGCAGTT
GCAAACAGTCCACGAGGCAACGATGTTCTCTCGTCCGAAGTGCAGCATTCTGAGTTGATA
TCGAGGAATTCTGAAGCCTTCAAACAGATGCGGGGCAATAATTTTGAGGTGGATCTTGAA
GAAGTAATGCTTATGGAGGCAATTTGGCTCTCTATACAAGATCAAGAAGCTTTGGGAAAT
CCAGGATGTGTTAGCACTACACCGTCATCAATTCCTTCAAGGCCTTTTGATGATGGTGAT
ATGACAACGACCGCTGAAGCAGCTTCTTCTGGTGGATTTGCTTGTGCAGTCGCAGCTTTA
GCTGAACAGCAGCATATGCATGGAGAGTCTTCTAGCGCATCACCTTGCCAAACAATAAGG
TTTGGCACCCTTAGCAGACCAGACAGATCCACTACACAGGATCTGAGTGTAGCTGGGAGC
AGTTCTTCGGACTCCAGAGTTGAGGAACCACCAACCAGCAATACACACCGAACAATAGAG
GCTGCAGAGTATTCTAATTCTAATGTCCAGTGGTCCGAGGTGGCCGAGGCTGGGACCAGT
ATTGCTGAATCTGATGGTACAGTGGAGGCTGGTGTTGACAATTCATCCACTTCGGCTGGG
TCCAACATTGATTCTGTTAGTGTTCCTGATAGCTTCGAGGAGCAGATGATGCTGGCCATG
GCTCTCTCGTTGGTCGATGCCCGTGCTAGAGCAGGTTCTCCGGGGTTAGCTTGGCGGTAG

Peptide Sequence

PEP ID

Zm00001d045309_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:18678409:18682507:-1 gene:Zm00001d045309 transcript:Zm00001d045309_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:GW2
Sequence

MGNQVGGRRRRRPPVDERYTRPQGLYPHPDIDLRKLRRLILEAKLAPCHPGADDARADLD
ECPICFLFYPSLNRSKCCAKGICTECFLQMKSPTSCKPTQCPYCKTLNYAVEYRGVKTKE
EKGIEQLEEQRVIEAQIRMRQQEVQDDAERMKNKRTATLGDVVASAQVDSCNTDGASTAV
ANSPRGNDVLSSEVQHSELISRNSEAFKQMRGNNFEVDLEEVMLMEAIWLSIQDQEALGN
PGCVSTTPSSIPSRPFDDGDMTTTAEAASSGGFACAVAALAEQQHMHGESSSASPCQTIR
FGTLSRPDRSTTQDLSVAGSSSSDSRVEEPPTSNTHRTIEAAEYSNSNVQWSEVAEAGTS
IAESDGTVEAGVDNSSTSAGSNIDSVSVPDSFEEQMMLAMALSLVDARARAGSPGLAWR

Transcript Sequence

Transcript ID

Zm00001d045309_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:18678409:18682507:-1 gene:Zm00001d045309 gene_biotype:protein_coding transcript_biotype:protein_coding description:GW2
Sequence

AGCGACGACGGCACGAGCAGAGGGGCCGTCGAGCCGTCGAGGAGAAACACCCCTTTTCCC
TTTCCATTTCGTCTCGTCCCGGCTCGTTGCCGGCGGATAGAAATCTTCTACTGACTTCTC
CCGTGTCGTGCTCTCTCTCTGCCGGCGGATAGAAATCTTCTACTGGCTCGCTGCGACGCG
TCCGGCCTCTCCTCTCCTCTCCTCACCCCCCCCCCCCCCGCGCGGGAGCGGGTGGTTGCG
GTGGCGGCTGAGGTTTAGTCGAGGGACCCGGCCGACCAGCGGTCGCGCGGCGGAGCCGAG
GGCAAGGGGATGGGGAACCAGGTCGGGGGCCGACGGCGGCGGCGGCCGCCGGTGGACGAG
CGCTACACGCGCCCGCAGGGGCTGTACCCGCACCCGGACATCGACCTCAGGAAGCTCCGC
CGCCTCATCCTCGAGGCCAAGCTCGCGCCCTGCCACCCTGGCGCCGACGACGCGCGCGCC
GACCTCGACGAGTGCCCCATCTGCTTCCTGTTCTACCCCAGCCTCAACCGCTCCAAGTGC
TGCGCCAAGGGAATTTGCACGGAGTGCTTCCTCCAGATGAAGTCGCCCACCTCGTGCAAA
CCGACGCAGTGTCCGTATTGCAAGACGCTGAATTACGCAGTGGAGTACCGGGGCGTGAAG
ACCAAGGAGGAGAAGGGCATAGAGCAGCTTGAGGAGCAGAGGGTGATCGAGGCGCAGATC
AGGATGCGGCAGCAGGAGGTACAGGACGATGCAGAGCGGATGAAGAACAAGCGGACTGCA
ACTTTGGGTGACGTAGTAGCATCAGCACAGGTCGATTCTTGCAATACCGATGGTGCATCA
ACTGCAGTTGCAAACAGTCCACGAGGCAACGATGTTCTCTCGTCCGAAGTGCAGCATTCT
GAGTTGATATCGAGGAATTCTGAAGCCTTCAAACAGATGCGGGGCAATAATTTTGAGGTG
GATCTTGAAGAAGTAATGCTTATGGAGGCAATTTGGCTCTCTATACAAGATCAAGAAGCT
TTGGGAAATCCAGGATGTGTTAGCACTACACCGTCATCAATTCCTTCAAGGCCTTTTGAT
GATGGTGATATGACAACGACCGCTGAAGCAGCTTCTTCTGGTGGATTTGCTTGTGCAGTC
GCAGCTTTAGCTGAACAGCAGCATATGCATGGAGAGTCTTCTAGCGCATCACCTTGCCAA
ACAATAAGGTTTGGCACCCTTAGCAGACCAGACAGATCCACTACACAGGATCTGAGTGTA
GCTGGGAGCAGTTCTTCGGACTCCAGAGTTGAGGAACCACCAACCAGCAATACACACCGA
ACAATAGAGGCTGCAGAGTATTCTAATTCTAATGTCCAGTGGTCCGAGGTGGCCGAGGCT
GGGACCAGTATTGCTGAATCTGATGGTACAGTGGAGGCTGGTGTTGACAATTCATCCACT
TCGGCTGGGTCCAACATTGATTCTGTTAGTGTTCCTGATAGCTTCGAGGAGCAGATGATG
CTGGCCATGGCTCTCTCGTTGGTCGATGCCCGTGCTAGAGCAGGTTCTCCGGGGTTAGCT
TGGCGGTAGCATTTCCTTGTAGGCCCTTCCACTCCTTATACTATTCTTTTCGGTTGTGCT
GCGTTTTGTTCCTAAGTGTTCCAATTGCCACGTAAAACATGGGGGATTAGATGGGGAGCA
GGCTCAAATTTGACGAACTGACAGTGATACTTGTGAATAGTGGGATAAATCTGTACATTT
GAAGCCAGTGGTTTGGCTAATTTTATCTCCTCTTCTTTCGATTCTTGAGGAAGAAATTGG
ATTCTCAGGCAGATTTCTGCCTACAGAAGTTGTGCCTGATGATGTTGAAACATTGTGTAA
ATACGGAAACGCACTCACATTTTTTTCA