Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d045282_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:17930725:17933275:1 gene:Zm00001d045282 gene_biotype:protein_coding transcript_biotype:protein_coding description:Splicing factor 45

Sequence

ATGCTCGGCGGTCTGTACGGCGACCTTCCGCCGCCGTCGTCGGCGGGCGACGACGACAAA
GCCTCCACGGCCTCCGTTTGGTCCAGCGCCACCAAGATGGCGCCTCCCACCCTCCGCAAG
CCGTCCACCGCCTTCGCCACACCCCCGTCTATTCTCCGCAACCAGCACCTGCGTCCGCCC
AAAGCCGCCCCCACCTCCGTCCCCGCTCCCTCCGCCGTTGCTGCCGAACCCGCCGCGGCC
ACCTCCTTCCAGCCCGCGTTCGTCGCTGTCCAGCCCACCGTGCTGGAGGAGTACGACCCT
GCCAGGCCCAACGACTACGAGGACTACCGTAAGGACAAGCTCCGACGCGCCAACGAGGCT
AAGCTGAACAAGGAGCTTGAGAGGCGGCGCCGTGAGGATCAAGAGCCGGAGAGGGAACGC
GAGCAGCGGGAGAGGGAAGCCCGCGAGCGCGAGGAGAAGGACTACCAGTCCAGGGCCTCT
TCCCTCAACATATCCGGGGAGGAGGCGTGGAAGAGGAGGGCAGCGATGAGCGGTGGCGGT
GCTGCTGCTAGGACTCCCTCGTCCCCACCTCACGGGGATGGATTCGCCATTGGGAGCTCA
TCTTCTGCTGGGTTGGGTGTGGGCGCCGGCGGACAGATGACTGCTGCCCAGCGGATGATG
GCCAAGATGGGGTGGAAAGAAGGTCAGGGGCTTGGCAAGCAAGAGCAGGGGATCACCGCG
CCTCTTGTGGCCAAGAAGACCGATAGGAGGGGAGGAGTTATTGTTGATGAGAGCAGTTCC
AGGCCTTCAGAAAAGAAGTCGAGATCTGTCAACTTTGATGGGCAACCAACACGAGTTTTG
CTGCTCCGCAACATGGTTGGTCCTGGCGAGGTTGACGACGAGCTGGAAGACGAGGTGGCA
TCGGAGTGTGCCAGGTACGGGACGGTGTCCCGGGTGCTGATATTCGAGATCACACAGGCA
TACTTCCCGTCCGATGAGGCTGTAAGGATATTCATACAGTTTGAGCGGGCGGAAGAAGCA
ACCAAGGCAATGGTCGATCTGCAGGGGCGGTTCTTTGGCGGGCGCGTGGTGCAGGCAACC
TTCTTTGACGAGGAAAGGTTTGCGAGGAACGAACTCGCTCCGATGCCAGGGGAAGTACCA
GGGTTCTTCGACTAA

Peptide Sequence

PEP ID

Zm00001d045282_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:17930725:17933275:1 gene:Zm00001d045282 transcript:Zm00001d045282_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Splicing factor 45

Sequence

MLGGLYGDLPPPSSAGDDDKASTASVWSSATKMAPPTLRKPSTAFATPPSILRNQHLRPP
KAAPTSVPAPSAVAAEPAAATSFQPAFVAVQPTVLEEYDPARPNDYEDYRKDKLRRANEA
KLNKELERRRREDQEPEREREQREREAREREEKDYQSRASSLNISGEEAWKRRAAMSGGG
AAARTPSSPPHGDGFAIGSSSSAGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITA
PLVAKKTDRRGGVIVDESSSRPSEKKSRSVNFDGQPTRVLLLRNMVGPGEVDDELEDEVA
SECARYGTVSRVLIFEITQAYFPSDEAVRIFIQFERAEEATKAMVDLQGRFFGGRVVQAT
FFDEERFARNELAPMPGEVPGFFD

Transcript Sequence

Transcript ID

Zm00001d045282_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:17930725:17933275:1 gene:Zm00001d045282 gene_biotype:protein_coding transcript_biotype:protein_coding description:Splicing factor 45

Sequence

CTTCCCCAAATCGCATCTCTCTCACTTGATCAGCCAAACCTAGGTACGGCAAGATGCTCG
GCGGTCTGTACGGCGACCTTCCGCCGCCGTCGTCGGCGGGCGACGACGACAAAGCCTCCA
CGGCCTCCGTTTGGTCCAGCGCCACCAAGATGGCGCCTCCCACCCTCCGCAAGCCGTCCA
CCGCCTTCGCCACACCCCCGTCTATTCTCCGCAACCAGCACCTGCGTCCGCCCAAAGCCG
CCCCCACCTCCGTCCCCGCTCCCTCCGCCGTTGCTGCCGAACCCGCCGCGGCCACCTCCT
TCCAGCCCGCGTTCGTCGCTGTCCAGCCCACCGTGCTGGAGGAGTACGACCCTGCCAGGC
CCAACGACTACGAGGACTACCGTAAGGACAAGCTCCGACGCGCCAACGAGGCTAAGCTGA
ACAAGGAGCTTGAGAGGCGGCGCCGTGAGGATCAAGAGCCGGAGAGGGAACGCGAGCAGC
GGGAGAGGGAAGCCCGCGAGCGCGAGGAGAAGGACTACCAGTCCAGGGCCTCTTCCCTCA
ACATATCCGGGGAGGAGGCGTGGAAGAGGAGGGCAGCGATGAGCGGTGGCGGTGCTGCTG
CTAGGACTCCCTCGTCCCCACCTCACGGGGATGGATTCGCCATTGGGAGCTCATCTTCTG
CTGGGTTGGGTGTGGGCGCCGGCGGACAGATGACTGCTGCCCAGCGGATGATGGCCAAGA
TGGGGTGGAAAGAAGGTCAGGGGCTTGGCAAGCAAGAGCAGGGGATCACCGCGCCTCTTG
TGGCCAAGAAGACCGATAGGAGGGGAGGAGTTATTGTTGATGAGAGCAGTTCCAGGCCTT
CAGAAAAGAAGTCGAGATCTGTCAACTTTGATGGGCAACCAACACGAGTTTTGCTGCTCC
GCAACATGGTTGGTCCTGGCGAGGTTGACGACGAGCTGGAAGACGAGGTGGCATCGGAGT
GTGCCAGGTACGGGACGGTGTCCCGGGTGCTGATATTCGAGATCACACAGGCATACTTCC
CGTCCGATGAGGCTGTAAGGATATTCATACAGTTTGAGCGGGCGGAAGAAGCAACCAAGG
CAATGGTCGATCTGCAGGGGCGGTTCTTTGGCGGGCGCGTGGTGCAGGCAACCTTCTTTG
ACGAGGAAAGGTTTGCGAGGAACGAACTCGCTCCGATGCCAGGGGAAGTACCAGGGTTCT
TCGACTAAAGCCAAACGTTTTGGTGTGGTATCAGTATAATATCAGGTGAGAGGTGGGTTG
TGGCCTTGTAGTTCTTTCTGTTAATCGAGGATGAAGTAGAGCATACAGTCAGACAATTTG
CATGCTTTCTAGTGCTAGGTGTAGTGTACTGGAAATATTGTGGATATAAGATATGTTTTT
TTTTTTTGTGCCGTGTCTCCTGCTACTGAACTACCTTCTACGTATATACATGAAAAATTT
TGTCCTGATTTTCGATCTTGTAATCACCTAACTGCGATATGACATCTCAGACGAAATCCT
TATTGTTGACAGAATAGCATTGCTGGAA