Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d045251_T009
CDS Infomation

cds chromosome:B73_RefGen_v4:9:17055267:17060033:1 gene:Zm00001d045251 gene_biotype:protein_coding transcript_biotype:protein_coding description:Acyl-coenzyme A oxidase

Sequence

ATGCTCTCCAGGAAGGACTTGTTTAAGGACACTCTAAGAAAGGCAGCCCATGCATGGAAG
CGTATTGTGGAACTACGTCTCACAGAGGAGGAAGCAGGTATGCTGAGGCTATACGTCGAT
CAGCCTGGTTATGTTGATCTGCATTGGGGCATGTTTGTTCCTGCTATAAAAGGTCAAGGT
ACTGAGGAGCAGCAGAAAAAGTGGTTACCAATGGCTTACAAGTTCCAAATAATTGGGTGC
TATGCTCAGACTGAACTCGGTCATGGCTCAAACGTTCAGGGCCTTGAAACAACTGCCACA
TTTGATCCAAAGACTGATGAGTTTGTCATCCACAGTCCAACTCTGACCTCCAGCAAATGG
TGGCCTGGTGGCTTGGGGAAAGCTTCCACTCATGCAGTGGTGTATGCTCGGCTGATAACT
GAAGGAAAGGACTATGGTATACATGGTTTCATTGTGCAACTGCGAAGCTTAGAGGATCAC
TCCCCTCTTCCTGGTATTACTCTGGGTGATATTGGTGGAAAATTTGGCAGTGGTGCATAT
AACAGTATGGACAATGGTGTTCTGCGATTTGACCATGTGCGCATACCAAGGGATCAAATG
TTGATGAGGCTTTCACAAGTTACAAGGGAGGGGAAATATGTTCATTCAGATGTCCCAAAG
CAGCTGCTTTATGGGACAATGGTTTTTGTTCGCCAGACAATAGTCGCAGATGCTTCTAAG
GCTTTGTCCCGTGCTGTTTGCATTGCTGTACGATACAGCGCCATCCGAAAGCAGTTTGGC
TCTCAAGATGGTGGCCCTGAGACTAAGGTCCTTGATTACAAGACTCAACAAAGCAGACTC
TTTCCGTTGCTGGCTTCAGCATATGCATTTAGATTTGTGGGTGACTGGCTGAAGTGGCTA
TACATGGATGTCACTCAGAAACTGGAAGCTAAAGACTACTCAACACTGCAAGAAGCCCAT
GCCTGTACTGCTGGTTTGAAGGCTGTGACAACATCTGCAACAGCTGATGCCATTGAAGAA
TGTAGAAAGCTCTGTGGCGGACATGGTTACCTGAACAGCAGTGGGCTTCCTGAATTGTTT
GCTGTCTATGTTCCTGCTTGCACTTATGAAGGAGACAATATTGTTCTGCTTTTGCAGGTT
GCAAGGATTCTAATGAAGACCTTATCTCAATTGACATCTGGAAAACAACCTGTTGGTACA
ATGGCTTACATGGGCAATGTACAATATCTGATGCAATGCAAATGTGCTGTTAACACAGCT
GAAGATTGGCTTAACCCTGTTGCCATACAAGAGGCGTTTGAAGCCAGGGCTCTCAGGATG
GCAGTAAACTGTGCCCAGAACATAGGCCAAGCAGCAAACCAAGAAGAAGCTTGCAGGTTT
CTATGA

Peptide Sequence

PEP ID

Zm00001d045251_P009
PEP Infomation

pep chromosome:B73_RefGen_v4:9:17055267:17060033:1 gene:Zm00001d045251 transcript:Zm00001d045251_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:Acyl-coenzyme A oxidase

Sequence

MLSRKDLFKDTLRKAAHAWKRIVELRLTEEEAGMLRLYVDQPGYVDLHWGMFVPAIKGQG
TEEQQKKWLPMAYKFQIIGCYAQTELGHGSNVQGLETTATFDPKTDEFVIHSPTLTSSKW
WPGGLGKASTHAVVYARLITEGKDYGIHGFIVQLRSLEDHSPLPGITLGDIGGKFGSGAY
NSMDNGVLRFDHVRIPRDQMLMRLSQVTREGKYVHSDVPKQLLYGTMVFVRQTIVADASK
ALSRAVCIAVRYSAIRKQFGSQDGGPETKVLDYKTQQSRLFPLLASAYAFRFVGDWLKWL
YMDVTQKLEAKDYSTLQEAHACTAGLKAVTTSATADAIEECRKLCGGHGYLNSSGLPELF
AVYVPACTYEGDNIVLLLQVARILMKTLSQLTSGKQPVGTMAYMGNVQYLMQCKCAVNTA
EDWLNPVAIQEAFEARALRMAVNCAQNIGQAANQEEACRFL

Transcript Sequence

Transcript ID

Zm00001d045251_T009
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:17055267:17060033:1 gene:Zm00001d045251 gene_biotype:protein_coding transcript_biotype:protein_coding description:Acyl-coenzyme A oxidase

Sequence

GTCTTCCGCAAGGATAACAGGACCATGCTCTCCAGGAAGGACTTGTTTAAGGACACTCTA
AGAAAGGCAGCCCATGCATGGAAGCGTATTGTGGAACTACGTCTCACAGAGGAGGAAGCA
GGTATGCTGAGGCTATACGTCGATCAGCCTGGTTATGTTGATCTGCATTGGGGCATGTTT
GTTCCTGCTATAAAAGGTCAAGGTACTGAGGAGCAGCAGAAAAAGTGGTTACCAATGGCT
TACAAGTTCCAAATAATTGGGTGCTATGCTCAGACTGAACTCGGTCATGGCTCAAACGTT
CAGGGCCTTGAAACAACTGCCACATTTGATCCAAAGACTGATGAGTTTGTCATCCACAGT
CCAACTCTGACCTCCAGCAAATGGTGGCCTGGTGGCTTGGGGAAAGCTTCCACTCATGCA
GTGGTGTATGCTCGGCTGATAACTGAAGGAAAGGACTATGGTATACATGGTTTCATTGTG
CAACTGCGAAGCTTAGAGGATCACTCCCCTCTTCCTGGTATTACTCTGGGTGATATTGGT
GGAAAATTTGGCAGTGGTGCATATAACAGTATGGACAATGGTGTTCTGCGATTTGACCAT
GTGCGCATACCAAGGGATCAAATGTTGATGAGGCTTTCACAAGTTACAAGGGAGGGGAAA
TATGTTCATTCAGATGTCCCAAAGCAGCTGCTTTATGGGACAATGGTTTTTGTTCGCCAG
ACAATAGTCGCAGATGCTTCTAAGGCTTTGTCCCGTGCTGTTTGCATTGCTGTACGATAC
AGCGCCATCCGAAAGCAGTTTGGCTCTCAAGATGGTGGCCCTGAGACTAAGGTCCTTGAT
TACAAGACTCAACAAAGCAGACTCTTTCCGTTGCTGGCTTCAGCATATGCATTTAGATTT
GTGGGTGACTGGCTGAAGTGGCTATACATGGATGTCACTCAGAAACTGGAAGCTAAAGAC
TACTCAACACTGCAAGAAGCCCATGCCTGTACTGCTGGTTTGAAGGCTGTGACAACATCT
GCAACAGCTGATGCCATTGAAGAATGTAGAAAGCTCTGTGGCGGACATGGTTACCTGAAC
AGCAGTGGGCTTCCTGAATTGTTTGCTGTCTATGTTCCTGCTTGCACTTATGAAGGAGAC
AATATTGTTCTGCTTTTGCAGGTTGCAAGGATTCTAATGAAGACCTTATCTCAATTGACA
TCTGGAAAACAACCTGTTGGTACAATGGCTTACATGGGCAATGTACAATATCTGATGCAA
TGCAAATGTGCTGTTAACACAGCTGAAGATTGGCTTAACCCTGTTGCCATACAAGAGGCG
TTTGAAGCCAGGGCTCTCAGGATGGCAGTAAACTGTGCCCAGAACATAGGCCAAGCAGCA
AACCAAGAAGAAGCTTGCAGGTTTCTATGAGCGGTCCCCTGATTTGCTAGAGGCTGCAGT
AGCTCACATCCAGTTGGTCATTGTAACCAAGTTCATTTCGAAGGTGCAGCAGGACATTCC
TGGACCTGGAGTGAAGGAACAGCTCCAGAACCTTTGCAATGTCTATGCCCTCTACATTCT
CCACAAGCACCTGGGCGACTTCCTGGCAACCGGGTGCATCACACCCAAGCAGGGAGCGCT
GGCAAACGAGCAGCTGGGCAAGCTTTACGCACAGGTGCGTCCAAATGCTGTTGCGCTGGT
TGATGCCTTCAACTACACAGACCACTACCTGGGGTCTGTGCTGGGGCGGTACGATGGGAA
TGTGTACCCAGCGCTGTACGAGGAGGCGTGGAAGGACCCTCTGAACGAGACGGTGGTGCC
CGAGGGGTACCACGAGTACCTCCGCCCCTTGCTCAAGCAGCAGCTCAAGCTCTCCAGGCT
CTAGTCTGATCGGCTACCCCCCCTGGAATTCTCCATGGCGGCTGCCTTCTCAGA