Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d045199_T022
CDS Infomation	cds chromosome:B73_RefGen_v4:9:15857503:15862969:1 gene:Zm00001d045199 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pre-mRNA-processing-splicing factor 8A
Sequence	ATGGACTTGTACAGCTACTTGATTCCGGTATATGAAATTGAACCTCTTGAAAAGATCACT GATGCATACCTTGACCAGTACCTGTGGTACGAGGGGGACAAACGGCACCTCTTCCCAAAT TGGGTTAAGCCTGCTGATTCAGAACCACCACCTCTTCTTGTTTATAAATGGTGCCAGGGT ATAAATAATTTACTGGATATATGGGACACAAGTGATGGACAGTGTGTTGTGATGCTCCAG ACAAAATTTGAGAAGTTCTTTGAGAAAATTGATCTGACTCTGTTGAACAGGCTTCTGCGC TTGGTCTTGGATCATAACATAGCTGACTATGTCACTGCAAAGAACAATGTAGTGTTGTCT TACAAGGACATGAGTCACACAAATTCTTATGGTCTCATTCGAGGGCTTCAATTTGCATCT TTTGTTGTTCAGTATTATGGCCTTGTGCTGGATCTCCTGATTCTTGGTCTAACTCGTGCA AGTGAGATTGCTGGGCCACCTCAAATGCCAAATGAGTTCCTTACATATGCTGACACAAAA GTTGAGACAAGGCATCCCATAAGATTATATTCTCGGTATATTGACAAGGTGCATATATTG TTCCGGTTCACCCATGAGGAAGCACGAGATCTAATTCAGCGTTACTTGACAGAACATCCT GATCCTAACAATGAGAACATGGTTGGTTACAATAACAAGAAATGTTGGCCCAGAGATGCA AGAATGAGGCTTATGAAACATGACGTGAATCTTGGAAGAAGTGTGTTCTGGGATATGAAG AACCGCCTTCCAAGGAGCATTACAACTTTAGAATGGGAGAATAGCTTTGTCTCTGTTTAC AGCAAGGACAATCCAAACCTGCTTTTTAGCATGTCTGGCTTTGAAGTCCGGATACTGCCA AAGATACGGATGACCCAGGAGGCATTCAGCAACACAAAAGATGGAGTATGGAATTTGCAG AATGAACAGACAAAAGAAAGAACGGCAATTGCCTTCCTGAGGGTTGACGATGAACATATG AAAGTGTTCGAGAACCGTGTCCGGCAGATTCTAATGTCATCAGGGTCAACAACATTCACC AAGATAGTCAATAAGTGGAATACAGCTCTCATTGGCCTTATGACATATTTCCGCGAAGCA ACTGTCCATACCCAGGAGCTTTTGGATTTACTGGTCAAATGTGAAAACAAGATCCAGACT CGTATAAAGATTGGCCTGAATTCAAAGATGCCTAGTAGGTTTCCTCCAGTTATCTTCTAT ACTCCCAAGGAGATTGGAGGTCTTGGAATGTTATCAATGGGCCATATTCTTATACCGCAG AGTGATCTTAGGTATAGCAAACAGACAGATGTTGGTGTAACACATTTTAGAAGTGGTATG AGCCATGAAGAGGATCAGCTTATTCCAAACTTGTATCGCTACATCCAGCCATGGGAGAGC GAGTTTATTGATTCACAGCGTGTTTGGGCTGAGTATGCTTTGAAGAGGCAGGAAGCACAA TCACAGAACAGACGATTAACTCTTGAGGATCTTGAAGATTCATGGGATAGAGGTATACCT CGTATCAACACTCTTTTCCAAAAAGACCGTCATACACTAGCCTATGACAAAGGATGGAGA GTGAGAACAGATTTTAAGCAATATCAAGTGCTGAAACAGAACCCATTCTGGTGGACACAT CAGCGGCATGATGGGAAGCTTTGGAATCTAAATAACTACAGAACAGATGTCATCCAAGCA CTTGGTGGTGTAGAAGGCATCTTGGAGCATACTTTATTTAAAGGGACTTACTTCCCCACT TGGGAGGGTCTGTTTTGGGAGAAGGCATCAGGTTTCGAAGAGTCAATGAAATACAAGAAA CTGACAAATGCACAGCGGTCTGGTCTCAATCAAATCCCCAATCGAAGATTTACCCTGTGG TGGTCACCAACCATCAATCGTGCAAATGTCTATGTTGGTTTCCAGGTCCAGCTAGATCTT ACGGGCATATTCATGCATGGTAAAATCCCGACATTGAAGATTTCTCTGATCCAGATCTTC CGTGCACATCTGTGGCAGAAGATCCATGAAAGTGTTGTTATGGATCTTTGCCAAGTTTTA GACCAGGAGTTGGATGCACTTGAGATTGAGACTGTGCAGAAGGAGACAATACATCCCAGG AAGAGTTACAAGATGAACAGTTCCTGTGCTGATATCCTTCTCTTTGCTGCTCATAGATGG CAGATGTCCAAACCAAGCTTAGTTTCTGAGTCGAAGGATGTATTTGATCAGAAAGCAAGT AACAAGTATTGGATTGATGTGCAACTGCGTTGGGGAGACTATGATTCACATGACATAGAA CGTTATACAAGAGCCAAGTTCATGGATTACACAACAGACAATATGTCCATATACCCATCG CCAACTGGTGTGATGATTGGAATCGATCTAGCGTATAATTTGCACTCTGCTTTTGGCAAC TGGTTTCCTGGATCAAAGCCACTACTTCAGCAGGCAATGAACAAGATCATGAAGTCAAAT CCTGCTCTGTATGTCCTGAGGGAGAGAATAAGGAAGGGTCTGCAGTTGTACTCTTCTGAA CCCACTGAACCATACCTGTCTTCACAGAACTATGGAGAGATATTCAGCAATCAAATCATA TGGTTCGTGGATGATACAAATGTGTATCGAGTCACTATTCACAAAACATTTGAGGGTAAC TTGACCACCAAACCAATTAATGGTGCTATTTTCATTTTCAATCCAAGAACGGGTCAACTT TTTCTTAAGGTTATCCACACAAGTGTATGGGCGGGGCAGAAGCGTCTTGGGCAGCTGGCC AAGTGGAAAACCGCTGAGGAGGTTGCTGCATTGGTTCGATCTCTTCCTGTAGAAGAGCAG CCAAAGCAAATTATTGTGACAAGGAAGGGCATGTTGGATCCCTTGGAGGTCCATCTACTT GACTTCCCTAACATTGTTATTAAGGGCAGCGAGCTGCAGCTTCCTTTCCAGGCTTGCTTG AAGATTGAGAAGTTTGGTGATCTTATACTGAAGGCAACTGAACCACAGATGGTTCTTTAT AATATATATGATGATTGGTTGAAAAGTATATCATCATACACAGCATTCTCCCGCATTGTG CTTATTCTACGTGCACTTCATGTGAATAATGAGAAGGCAAAGATGTTGCTCAAACCTGAC AAAACAATTGTTACTGAACCACATCATATATGGCCATCTCTGAATGATGAACAGTGGTTG AAGGTTGAGTGTGCACTAAGGGACCTCATCCTTTCTGATTATGCAAAGAAAAACAATGTT AATACTTCTGCACTGACACAATCTGAAATGCGAGATATCATTCTTGGAGCTGAAATTGCT CCACCATCACAGCAGAGGCAACAGATTGCTGAAATTGAGAAACAGTCAAGAGAGACTACT CAGTTAACTGCTGTAACCACAAGGACGACGAATGTGCACGGAGATGAACTCATTATCACA ACCACAAGTCCATATGAGCAACAAGCATTCGCATCGAAGACTGATTGGCGTGTCAGAGCC ATCTCTGCCACAAACTTGTATCTACGTGTAAATCACATTTATGTCAATTCTGATGATATA AAGGAAACTGGCTACACTTACATTATGCCAAAGAACATATTGAAGAAATTCATATGCGTA GCAGATCTGCGTACACAAATCGCTGGATTCTTATATGGGCTGAGTCCACAGGACAATCCT CAAGTCAAAGAGATTAGGTGTATAGCCATCCCTCCGCAGCATGGAACACACCAGATGGTG ACTCTGCCATCAAATCTTCCTGAACATGAGTTCCTTAATGATCTTGAACCCTTGGGATGG ATGCATACACAGCCAAATGAAGCTCCACAGCTATCACCACAGGACCTGACATCACATGCC AAGATTCTGGAGAACAACAAACAATGGGATGGTGAGAAGTGCATCATTCTGACATGCAGC TTCACCCCAGGATCTTGCTCGTTGACTGCTTACAAGCTGACACCAAGTGGTTATGAGTGG GGACGCAGCAACAAGGACAACGGAAGCAACCCACATGGATACCTCCCAACTCATTACGAG AAGGTCCAGATGCTTCTGAGCGACCGCTTCCTTGGTTTCTACATGATTCCGGATAACACC CCTTGGAACTTCAACTTCATGGGAGTGAAGCACGACCCACAGATGAAGTACAACATGAAG CTGGGCATGCCCCGGGACTTCTATCACGAGGACCACAGGCCGACACACTTCCTTGAGTTC AGCAACATCGAGGAGGGAGAGGTCGCTGAAGGTGATAGGGAGGACACATTCACGTAG

Peptide Sequence

PEP ID	Zm00001d045199_P022
PEP Infomation	pep chromosome:B73_RefGen_v4:9:15857503:15862969:1 gene:Zm00001d045199 transcript:Zm00001d045199_T022 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pre-mRNA-processing-splicing factor 8A
Sequence	MDLYSYLIPVYEIEPLEKITDAYLDQYLWYEGDKRHLFPNWVKPADSEPPPLLVYKWCQG INNLLDIWDTSDGQCVVMLQTKFEKFFEKIDLTLLNRLLRLVLDHNIADYVTAKNNVVLS YKDMSHTNSYGLIRGLQFASFVVQYYGLVLDLLILGLTRASEIAGPPQMPNEFLTYADTK VETRHPIRLYSRYIDKVHILFRFTHEEARDLIQRYLTEHPDPNNENMVGYNNKKCWPRDA RMRLMKHDVNLGRSVFWDMKNRLPRSITTLEWENSFVSVYSKDNPNLLFSMSGFEVRILP KIRMTQEAFSNTKDGVWNLQNEQTKERTAIAFLRVDDEHMKVFENRVRQILMSSGSTTFT KIVNKWNTALIGLMTYFREATVHTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVIFY TPKEIGGLGMLSMGHILIPQSDLRYSKQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWES EFIDSQRVWAEYALKRQEAQSQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWR VRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPT WEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDL TGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVLDQELDALEIETVQKETIHPR KSYKMNSSCADILLFAAHRWQMSKPSLVSESKDVFDQKASNKYWIDVQLRWGDYDSHDIE RYTRAKFMDYTTDNMSIYPSPTGVMIGIDLAYNLHSAFGNWFPGSKPLLQQAMNKIMKSN PALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVYRVTIHKTFEGN LTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQ PKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILKATEPQMVLY NIYDDWLKSISSYTAFSRIVLILRALHVNNEKAKMLLKPDKTIVTEPHHIWPSLNDEQWL KVECALRDLILSDYAKKNNVNTSALTQSEMRDIILGAEIAPPSQQRQQIAEIEKQSRETT QLTAVTTRTTNVHGDELIITTTSPYEQQAFASKTDWRVRAISATNLYLRVNHIYVNSDDI KETGYTYIMPKNILKKFICVADLRTQIAGFLYGLSPQDNPQVKEIRCIAIPPQHGTHQMV TLPSNLPEHEFLNDLEPLGWMHTQPNEAPQLSPQDLTSHAKILENNKQWDGEKCIILTCS FTPGSCSLTAYKLTPSGYEWGRSNKDNGSNPHGYLPTHYEKVQMLLSDRFLGFYMIPDNT PWNFNFMGVKHDPQMKYNMKLGMPRDFYHEDHRPTHFLEFSNIEEGEVAEGDREDTFT

Transcript Sequence

Transcript ID	Zm00001d045199_T022
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:15857503:15862969:1 gene:Zm00001d045199 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pre-mRNA-processing-splicing factor 8A
Sequence	AACTGTTCATTGGCTGGAATCAAGAAAGTTCTCCCCAATTCCTTTCCCGCCATTGTCATA CAAGCATGACACTAAACTTCTTATACTTGCTCTAGAAAGGCTGAAGGAGTCATACAGCGT AGCAGTTAGATTGAACCAATTGCAACGAGAGGAGCTTGGGTTGATTGAACAAGCTTATGA TAATCCACATGAAGCACTGTCAAGGATAAAAAGGCATCTCCTTACTCAGCGTGCTTTTAA AGAAGTTGGTATAGAATTCATGGACTTGTACAGCTACTTGATTCCGGTATATGAAATTGA ACCTCTTGAAAAGATCACTGATGCATACCTTGACCAGTACCTGTGGTACGAGGGGGACAA ACGGCACCTCTTCCCAAATTGGGTTAAGCCTGCTGATTCAGAACCACCACCTCTTCTTGT TTATAAATGGTGCCAGGGTATAAATAATTTACTGGATATATGGGACACAAGTGATGGACA GTGTGTTGTGATGCTCCAGACAAAATTTGAGAAGTTCTTTGAGAAAATTGATCTGACTCT GTTGAACAGGCTTCTGCGCTTGGTCTTGGATCATAACATAGCTGACTATGTCACTGCAAA GAACAATGTAGTGTTGTCTTACAAGGACATGAGTCACACAAATTCTTATGGTCTCATTCG AGGGCTTCAATTTGCATCTTTTGTTGTTCAGTATTATGGCCTTGTGCTGGATCTCCTGAT TCTTGGTCTAACTCGTGCAAGTGAGATTGCTGGGCCACCTCAAATGCCAAATGAGTTCCT TACATATGCTGACACAAAAGTTGAGACAAGGCATCCCATAAGATTATATTCTCGGTATAT TGACAAGGTGCATATATTGTTCCGGTTCACCCATGAGGAAGCACGAGATCTAATTCAGCG TTACTTGACAGAACATCCTGATCCTAACAATGAGAACATGGTTGGTTACAATAACAAGAA ATGTTGGCCCAGAGATGCAAGAATGAGGCTTATGAAACATGACGTGAATCTTGGAAGAAG TGTGTTCTGGGATATGAAGAACCGCCTTCCAAGGAGCATTACAACTTTAGAATGGGAGAA TAGCTTTGTCTCTGTTTACAGCAAGGACAATCCAAACCTGCTTTTTAGCATGTCTGGCTT TGAAGTCCGGATACTGCCAAAGATACGGATGACCCAGGAGGCATTCAGCAACACAAAAGA TGGAGTATGGAATTTGCAGAATGAACAGACAAAAGAAAGAACGGCAATTGCCTTCCTGAG GGTTGACGATGAACATATGAAAGTGTTCGAGAACCGTGTCCGGCAGATTCTAATGTCATC AGGGTCAACAACATTCACCAAGATAGTCAATAAGTGGAATACAGCTCTCATTGGCCTTAT GACATATTTCCGCGAAGCAACTGTCCATACCCAGGAGCTTTTGGATTTACTGGTCAAATG TGAAAACAAGATCCAGACTCGTATAAAGATTGGCCTGAATTCAAAGATGCCTAGTAGGTT TCCTCCAGTTATCTTCTATACTCCCAAGGAGATTGGAGGTCTTGGAATGTTATCAATGGG CCATATTCTTATACCGCAGAGTGATCTTAGGTATAGCAAACAGACAGATGTTGGTGTAAC ACATTTTAGAAGTGGTATGAGCCATGAAGAGGATCAGCTTATTCCAAACTTGTATCGCTA CATCCAGCCATGGGAGAGCGAGTTTATTGATTCACAGCGTGTTTGGGCTGAGTATGCTTT GAAGAGGCAGGAAGCACAATCACAGAACAGACGATTAACTCTTGAGGATCTTGAAGATTC ATGGGATAGAGGTATACCTCGTATCAACACTCTTTTCCAAAAAGACCGTCATACACTAGC CTATGACAAAGGATGGAGAGTGAGAACAGATTTTAAGCAATATCAAGTGCTGAAACAGAA CCCATTCTGGTGGACACATCAGCGGCATGATGGGAAGCTTTGGAATCTAAATAACTACAG AACAGATGTCATCCAAGCACTTGGTGGTGTAGAAGGCATCTTGGAGCATACTTTATTTAA AGGGACTTACTTCCCCACTTGGGAGGGTCTGTTTTGGGAGAAGGCATCAGGTTTCGAAGA GTCAATGAAATACAAGAAACTGACAAATGCACAGCGGTCTGGTCTCAATCAAATCCCCAA TCGAAGATTTACCCTGTGGTGGTCACCAACCATCAATCGTGCAAATGTCTATGTTGGTTT CCAGGTCCAGCTAGATCTTACGGGCATATTCATGCATGGTAAAATCCCGACATTGAAGAT TTCTCTGATCCAGATCTTCCGTGCACATCTGTGGCAGAAGATCCATGAAAGTGTTGTTAT GGATCTTTGCCAAGTTTTAGACCAGGAGTTGGATGCACTTGAGATTGAGACTGTGCAGAA GGAGACAATACATCCCAGGAAGAGTTACAAGATGAACAGTTCCTGTGCTGATATCCTTCT CTTTGCTGCTCATAGATGGCAGATGTCCAAACCAAGCTTAGTTTCTGAGTCGAAGGATGT ATTTGATCAGAAAGCAAGTAACAAGTATTGGATTGATGTGCAACTGCGTTGGGGAGACTA TGATTCACATGACATAGAACGTTATACAAGAGCCAAGTTCATGGATTACACAACAGACAA TATGTCCATATACCCATCGCCAACTGGTGTGATGATTGGAATCGATCTAGCGTATAATTT GCACTCTGCTTTTGGCAACTGGTTTCCTGGATCAAAGCCACTACTTCAGCAGGCAATGAA CAAGATCATGAAGTCAAATCCTGCTCTGTATGTCCTGAGGGAGAGAATAAGGAAGGGTCT GCAGTTGTACTCTTCTGAACCCACTGAACCATACCTGTCTTCACAGAACTATGGAGAGAT ATTCAGCAATCAAATCATATGGTTCGTGGATGATACAAATGTGTATCGAGTCACTATTCA CAAAACATTTGAGGGTAACTTGACCACCAAACCAATTAATGGTGCTATTTTCATTTTCAA TCCAAGAACGGGTCAACTTTTTCTTAAGGTTATCCACACAAGTGTATGGGCGGGGCAGAA GCGTCTTGGGCAGCTGGCCAAGTGGAAAACCGCTGAGGAGGTTGCTGCATTGGTTCGATC TCTTCCTGTAGAAGAGCAGCCAAAGCAAATTATTGTGACAAGGAAGGGCATGTTGGATCC CTTGGAGGTCCATCTACTTGACTTCCCTAACATTGTTATTAAGGGCAGCGAGCTGCAGCT TCCTTTCCAGGCTTGCTTGAAGATTGAGAAGTTTGGTGATCTTATACTGAAGGCAACTGA ACCACAGATGGTTCTTTATAATATATATGATGATTGGTTGAAAAGTATATCATCATACAC AGCATTCTCCCGCATTGTGCTTATTCTACGTGCACTTCATGTGAATAATGAGAAGGCAAA GATGTTGCTCAAACCTGACAAAACAATTGTTACTGAACCACATCATATATGGCCATCTCT GAATGATGAACAGTGGTTGAAGGTTGAGTGTGCACTAAGGGACCTCATCCTTTCTGATTA TGCAAAGAAAAACAATGTTAATACTTCTGCACTGACACAATCTGAAATGCGAGATATCAT TCTTGGAGCTGAAATTGCTCCACCATCACAGCAGAGGCAACAGATTGCTGAAATTGAGAA ACAGTCAAGAGAGACTACTCAGTTAACTGCTGTAACCACAAGGACGACGAATGTGCACGG AGATGAACTCATTATCACAACCACAAGTCCATATGAGCAACAAGCATTCGCATCGAAGAC TGATTGGCGTGTCAGAGCCATCTCTGCCACAAACTTGTATCTACGTGTAAATCACATTTA TGTCAATTCTGATGATATAAAGGAAACTGGCTACACTTACATTATGCCAAAGAACATATT GAAGAAATTCATATGCGTAGCAGATCTGCGTACACAAATCGCTGGATTCTTATATGGGCT GAGTCCACAGGACAATCCTCAAGTCAAAGAGATTAGGTGTATAGCCATCCCTCCGCAGCA TGGAACACACCAGATGGTGACTCTGCCATCAAATCTTCCTGAACATGAGTTCCTTAATGA TCTTGAACCCTTGGGATGGATGCATACACAGCCAAATGAAGCTCCACAGCTATCACCACA GGACCTGACATCACATGCCAAGATTCTGGAGAACAACAAACAATGGGATGGTGAGAAGTG CATCATTCTGACATGCAGCTTCACCCCAGGATCTTGCTCGTTGACTGCTTACAAGCTGAC ACCAAGTGGTTATGAGTGGGGACGCAGCAACAAGGACAACGGAAGCAACCCACATGGATA CCTCCCAACTCATTACGAGAAGGTCCAGATGCTTCTGAGCGACCGCTTCCTTGGTTTCTA CATGATTCCGGATAACACCCCTTGGAACTTCAACTTCATGGGAGTGAAGCACGACCCACA GATGAAGTACAACATGAAGCTGGGCATGCCCCGGGACTTCTATCACGAGGACCACAGGCC GACACACTTCCTTGAGTTCAGCAACATCGAGGAGGGAGAGGTCGCTGAAGGTGATAGGGA GGACACATTCACGTAGGGCGCTGGGCGCCTGTTTTAGAAACTCAGTATCTCAAACGCACT TTAGCTCTGTTTTGAATGGCAATGTGTGAAAGGCTGAAAGCTGTAACCTGACTCGACGGG TGTCATCTGTTTTTTTGGCTTAATCCTGTATCATACCTTGTTGTAAGACAGCCCTGGAGA GGGGTAAAAATTGTACAAGTGCACGCCATGGCAACAGTAAAGATTTTACTTAGTAGCTAT GCTATTCTAAGATGGCTCCTCCCAAGCTTTAAT