Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d045195_T015
CDS Infomation

cds chromosome:B73_RefGen_v4:9:15779725:15788889:-1 gene:Zm00001d045195 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP-1 complex subunit gamma-1

Sequence

ATGGACCTCGCCATCAATCCCTTCTCCTCCGGTACCCGCCTCCGGGACATGATACGTGCG
ATACGCGCGTGCAAGACGGCAGCAGAGGAGCGCGCCGTGGTGCGGCGGGAGTGCGCGGCG
ATACGGGCCGCTATCAGCGAGGGCGACCAGGACTACCGGCATCGGAACATGGCCAAGCTC
ATGTTCATCCACATGCTCGGCTACCCCACACACTTCGGCCAGATGGAGTGCCTCAAACTT
ATTGCTGCCGCAGGCTTCCCCGAGAAGCGCATCGGCTATCTAGGACTCATGCTGCTGCTC
GACGAGCGGCAGGAGGTCCTCATGCTCGTCACCAACTCTCTCAAGCAAGATCTTAACCAC
TCAAACCAGTTCATTGTTGGTCTTGCACTCTGTGCCCTTGGCAATATATGTTCTGCTGAA
ATGGCGCGTGATCTTGCTCCTGAAGTGGAGCGGCTGTTACAAAATAGGGACCCTAATACA
AAGAAGAAGGCCGCTTTATGCTCTGTGAGGATTGTACGAAAAGTTCCAGACTTGGCAGAA
ATTTTCATGAGTGCCGCCACATCATTACTGAAGGAAAAACATCACGGTGTTCTGATATCT
GCTGTTCAGCTTTGCATGGAGCTATGTAATGCCAGCAATGAAGCATTGGAGTACTTGAGG
AAGAATTGCCTTGAAGGACTGGTCCGAATACTGAGAGATGTATCCAACAGTTCATATGCT
CCTGAATACGACATTGGTGGCATCACAGATCCATTCTTACATATCCGAGTGCTTAAACTC
ATGCGGATACTGGGCCAAGGAGATGCAGATTGCAGCGAGTATATCAATGACATTCTTGCT
CAGGTTTCAACGAAAACCGAGTCAAATAAGAATGCTGGAAATGCTATTTTATATGAATGT
GTGGAGACAATAATGAGCATTGAAGCTACAAGTGGTTTACGTGTGTTGGCAATTAATATT
TTGGGTCGGTTTTTGTCCAACCGCGATAACAACATAAGATATGTTGCCCTAAACATGCTT
ATGAAGGCCATTGCTGTAGACACACAAGCGGTGCAGAGGCACAGGGCAACAATATTAGAG
TGTGTCAAGGATGCAGATGTTTCTATTCGTAAAAGGGCCCTGGAACTTGTTTACCTACTT
GTCAACGATACAAATGTAAAGCCATTGACTAAGGAACTTGTTGATTACCTTGAAGTGAGT
GATCAAGATTTCAAGGAAGACCTCACTGCTAAGATATGCTCAATAGTTGAAAAGTTTTCC
CTGGACAGGCTATGGTACTTAGACCAGATGTTCAGAGTTTTATCTCTGGCTGGTAATCAT
GTGAAGGATGATGTATGGCATGCTCTTATAGTTCTAGTGAGTAATGCATCTGAACTTCAA
GGATATTCAGTCAGGTCATTATATAAAGCATTGCAAGCATCTAGTGAACAGGAAAGTTTA
GTTAGGGTGGCTGTTTGGTGCATCGGTGAATATGGAGAAATGCTGGTCAACAATCTTAGT
ATGTTGGACATGGAGGAACCAATTACGGTAACAGAATATGATGCTGTGGATGCCGTAGAG
GCTGCTCTTCAGCGCTACTCTGCAGATGTTACTACTAGGGCTATGTGTCTTGTCTCTCTT
TTGAAGCTTTCCTCCCGGTTTCCACCAACATCAGAGAGGATAAAAGAAATAGTTGCGCAA
AATAAAGGGAATACTGTGCTTGAATTGCAGCAAAGATCTATTGAATTCAGTTCCATTATA
CAAAGACATCAATCGATGAAATCATCTTTGCTTGAACGGATGCCTGTATTGGATGAAGCT
AATTATTTGGTGAAGAGAGCTGCTTCTATACAGGCTGCAGTTCCATCTGTAAATTCTGCT
CCAGCAGTCACTTCTGGAGGCCCATTTAAGCTTCCTAATGGTGTTGGAAAGCCTGCAGCT
CCTTTAGCTGATTTGCTTGATTTGAGTTCTGATGATGCTCCAGTGACTACCTCGGCCCCT
ACAACAGCACCTAATGATTTTCTACAGGATCTGTTGGGCATTGGCTTGACTGATTCGTCT
CCTATAGGCGGAGCTCCGTCTACAAGCACTGACATTCTGATGGATCTTCTATCTATTGGT
TCATCTTCTGTACAAAATGGACCACCAACGGCAAACTTTAGCCTTCCTGGCATAGAGACT
AAATCTGTCGCTGTTACACCTCAAGTTGTGGATCTTCTTGATGGTTTGTCCTCAGGCACA
TCTCTTCCTGATGAGAACGCAACCTACCCCACAATCACAGCATTCCAGAGTGCAACTTTG
AGGATCACATTCAGTTTCAAAAAACAACCTGGAAAACCTCAGGAGACTACAATTAGTGCT
TCTTTCACAAATTTAGCAACCACTACATTCACAGATTTCGTCTTCCAGGCAGCTGTGCCA
AAGGTAGCA

Peptide Sequence

PEP ID

Zm00001d045195_P015
PEP Infomation

pep chromosome:B73_RefGen_v4:9:15779725:15788889:-1 gene:Zm00001d045195 transcript:Zm00001d045195_T015 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP-1 complex subunit gamma-1

Sequence

MDLAINPFSSGTRLRDMIRAIRACKTAAEERAVVRRECAAIRAAISEGDQDYRHRNMAKL
MFIHMLGYPTHFGQMECLKLIAAAGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNH
SNQFIVGLALCALGNICSAEMARDLAPEVERLLQNRDPNTKKKAALCSVRIVRKVPDLAE
IFMSAATSLLKEKHHGVLISAVQLCMELCNASNEALEYLRKNCLEGLVRILRDVSNSSYA
PEYDIGGITDPFLHIRVLKLMRILGQGDADCSEYINDILAQVSTKTESNKNAGNAILYEC
VETIMSIEATSGLRVLAINILGRFLSNRDNNIRYVALNMLMKAIAVDTQAVQRHRATILE
CVKDADVSIRKRALELVYLLVNDTNVKPLTKELVDYLEVSDQDFKEDLTAKICSIVEKFS
LDRLWYLDQMFRVLSLAGNHVKDDVWHALIVLVSNASELQGYSVRSLYKALQASSEQESL
VRVAVWCIGEYGEMLVNNLSMLDMEEPITVTEYDAVDAVEAALQRYSADVTTRAMCLVSL
LKLSSRFPPTSERIKEIVAQNKGNTVLELQQRSIEFSSIIQRHQSMKSSLLERMPVLDEA
NYLVKRAASIQAAVPSVNSAPAVTSGGPFKLPNGVGKPAAPLADLLDLSSDDAPVTTSAP
TTAPNDFLQDLLGIGLTDSSPIGGAPSTSTDILMDLLSIGSSSVQNGPPTANFSLPGIET
KSVAVTPQVVDLLDGLSSGTSLPDENATYPTITAFQSATLRITFSFKKQPGKPQETTISA
SFTNLATTTFTDFVFQAAVPKVA

Transcript Sequence

Transcript ID

Zm00001d045195_T015
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:15779725:15788889:-1 gene:Zm00001d045195 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP-1 complex subunit gamma-1

Sequence

GCCTCTTCGCAAATCCCACCACCACCATCACCGCCTCCCAGATCCGCCTGGCCGTCCTCC
TCGTCCGCCACTGCGGCGGTGATCCCTCGCCGCCCCGCCCTTGATACCGTCGAGAGGATC
GTCGAGGACTTCGCCATGGACCTCGCCATCAATCCCTTCTCCTCCGGTACCCGCCTCCGG
GACATGATACGTGCGATACGCGCGTGCAAGACGGCAGCAGAGGAGCGCGCCGTGGTGCGG
CGGGAGTGCGCGGCGATACGGGCCGCTATCAGCGAGGGCGACCAGGACTACCGGCATCGG
AACATGGCCAAGCTCATGTTCATCCACATGCTCGGCTACCCCACACACTTCGGCCAGATG
GAGTGCCTCAAACTTATTGCTGCCGCAGGCTTCCCCGAGAAGCGCATCGGCTATCTAGGA
CTCATGCTGCTGCTCGACGAGCGGCAGGAGGTCCTCATGCTCGTCACCAACTCTCTCAAG
CAAGATCTTAACCACTCAAACCAGTTCATTGTTGGTCTTGCACTCTGTGCCCTTGGCAAT
ATATGTTCTGCTGAAATGGCGCGTGATCTTGCTCCTGAAGTGGAGCGGCTGTTACAAAAT
AGGGACCCTAATACAAAGAAGAAGGCCGCTTTATGCTCTGTGAGGATTGTACGAAAAGTT
CCAGACTTGGCAGAAATTTTCATGAGTGCCGCCACATCATTACTGAAGGAAAAACATCAC
GGTGTTCTGATATCTGCTGTTCAGCTTTGCATGGAGCTATGTAATGCCAGCAATGAAGCA
TTGGAGTACTTGAGGAAGAATTGCCTTGAAGGACTGGTCCGAATACTGAGAGATGTATCC
AACAGTTCATATGCTCCTGAATACGACATTGGTGGCATCACAGATCCATTCTTACATATC
CGAGTGCTTAAACTCATGCGGATACTGGGCCAAGGAGATGCAGATTGCAGCGAGTATATC
AATGACATTCTTGCTCAGGTTTCAACGAAAACCGAGTCAAATAAGAATGCTGGAAATGCT
ATTTTATATGAATGTGTGGAGACAATAATGAGCATTGAAGCTACAAGTGGTTTACGTGTG
TTGGCAATTAATATTTTGGGTCGGTTTTTGTCCAACCGCGATAACAACATAAGATATGTT
GCCCTAAACATGCTTATGAAGGCCATTGCTGTAGACACACAAGCGGTGCAGAGGCACAGG
GCAACAATATTAGAGTGTGTCAAGGATGCAGATGTTTCTATTCGTAAAAGGGCCCTGGAA
CTTGTTTACCTACTTGTCAACGATACAAATGTAAAGCCATTGACTAAGGAACTTGTTGAT
TACCTTGAAGTGAGTGATCAAGATTTCAAGGAAGACCTCACTGCTAAGATATGCTCAATA
GTTGAAAAGTTTTCCCTGGACAGGCTATGGTACTTAGACCAGATGTTCAGAGTTTTATCT
CTGGCTGGTAATCATGTGAAGGATGATGTATGGCATGCTCTTATAGTTCTAGTGAGTAAT
GCATCTGAACTTCAAGGATATTCAGTCAGGTCATTATATAAAGCATTGCAAGCATCTAGT
GAACAGGAAAGTTTAGTTAGGGTGGCTGTTTGGTGCATCGGTGAATATGGAGAAATGCTG
GTCAACAATCTTAGTATGTTGGACATGGAGGAACCAATTACGGTAACAGAATATGATGCT
GTGGATGCCGTAGAGGCTGCTCTTCAGCGCTACTCTGCAGATGTTACTACTAGGGCTATG
TGTCTTGTCTCTCTTTTGAAGCTTTCCTCCCGGTTTCCACCAACATCAGAGAGGATAAAA
GAAATAGTTGCGCAAAATAAAGGGAATACTGTGCTTGAATTGCAGCAAAGATCTATTGAA
TTCAGTTCCATTATACAAAGACATCAATCGATGAAATCATCTTTGCTTGAACGGATGCCT
GTATTGGATGAAGCTAATTATTTGGTGAAGAGAGCTGCTTCTATACAGGCTGCAGTTCCA
TCTGTAAATTCTGCTCCAGCAGTCACTTCTGGAGGCCCATTTAAGCTTCCTAATGGTGTT
GGAAAGCCTGCAGCTCCTTTAGCTGATTTGCTTGATTTGAGTTCTGATGATGCTCCAGTG
ACTACCTCGGCCCCTACAACAGCACCTAATGATTTTCTACAGGATCTGTTGGGCATTGGC
TTGACTGATTCGTCTCCTATAGGCGGAGCTCCGTCTACAAGCACTGACATTCTGATGGAT
CTTCTATCTATTGGTTCATCTTCTGTACAAAATGGACCACCAACGGCAAACTTTAGCCTT
CCTGGCATAGAGACTAAATCTGTCGCTGTTACACCTCAAGTTGTGGATCTTCTTGATGGT
TTGTCCTCAGGCACATCTCTTCCTGATGAGAACGCAACCTACCCCACAATCACAGCATTC
CAGAGTGCAACTTTGAGGATCACATTCAGTTTCAAAAAACAACCTGGAAAACCTCAGGAG
ACTACAATTAGTGCTTCTTTCACAAATTTAGCAACCACTACATTCACAGATTTCGTCTTC
CAGGCAGCTGTGCCAAAGGTAGCATT