Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d045194_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:15741242:15741994:1 gene:Zm00001d045194 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit alpha type

Sequence

ATGTCTCGCCGCTATGACAGCCGCACGACGATCTTCTCGCCGGAGGGGCGTCTCTACCAG
GTGGAGTACGCGATGGAGGCGATCGGCAACGCCGGGTCAGCCCTCGGGATCCTAGCGGCC
GACGGCGTGGTCCTCGTCGGCGAGAAGAAGGTGACCTCCAAGCTCCTCCAGACCTCGCGC
TCCGCCGAGAAGATGTACAAGATCGACTCCCACCTGGCGTGCGCCGTGGCCGGGATCATG
TCCGACGCCAACATCCTCATCAACACCGCCCGCCTCCACGCCCAACGCTACGCGCTCTCC
TACCAGGAACCCATCCCCGTCGAGCAGCTCGTCCAGTCCCTCTGCGACACCAAGCAGGGA
TACACCCAGTTCGGAGGCCTCCGCCCCTTCGGGGTCTCCTTCCTATTCGCCGGGTGGGAC
AAGCACCACGGCTTCCAGCTCTACATGAGCGACCCATCCGGGAACTACGGCGGGTGGAAG
GCCGCCGCTGTTGGGGCCAACAGCCAGGCCGCGCAGTCCATGCTCAAGCAGGACTACAAG
GACGGCTTGACCCGCGAGGAGGCCGTCGCCCTCGCGCTTAAGGTCCTCAGCAAGACCATG
GACTCCACCAGCCTGACTGCCGAGAAGCTGGAGCTGGCCGAGGTGTTTCTGCAGCCGGGC
TCCGGGGAGGTACAGTACCAGGTGTGCTCTCCTGAAGCGCTGGGGAAGCTGCTTGCAAAG
TCCGGCCTGACACAGCCAACACCCGAGGCATAA

Peptide Sequence

PEP ID

Zm00001d045194_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:15741242:15741994:1 gene:Zm00001d045194 transcript:Zm00001d045194_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit alpha type

Sequence

MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGILAADGVVLVGEKKVTSKLLQTSR
SAEKMYKIDSHLACAVAGIMSDANILINTARLHAQRYALSYQEPIPVEQLVQSLCDTKQG
YTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYGGWKAAAVGANSQAAQSMLKQDYK
DGLTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGSGEVQYQVCSPEALGKLLAK
SGLTQPTPEA

Transcript Sequence

Transcript ID

Zm00001d045194_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:15741242:15741994:1 gene:Zm00001d045194 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit alpha type

Sequence

ATGTCTCGCCGCTATGACAGCCGCACGACGATCTTCTCGCCGGAGGGGCGTCTCTACCAG
GTGGAGTACGCGATGGAGGCGATCGGCAACGCCGGGTCAGCCCTCGGGATCCTAGCGGCC
GACGGCGTGGTCCTCGTCGGCGAGAAGAAGGTGACCTCCAAGCTCCTCCAGACCTCGCGC
TCCGCCGAGAAGATGTACAAGATCGACTCCCACCTGGCGTGCGCCGTGGCCGGGATCATG
TCCGACGCCAACATCCTCATCAACACCGCCCGCCTCCACGCCCAACGCTACGCGCTCTCC
TACCAGGAACCCATCCCCGTCGAGCAGCTCGTCCAGTCCCTCTGCGACACCAAGCAGGGA
TACACCCAGTTCGGAGGCCTCCGCCCCTTCGGGGTCTCCTTCCTATTCGCCGGGTGGGAC
AAGCACCACGGCTTCCAGCTCTACATGAGCGACCCATCCGGGAACTACGGCGGGTGGAAG
GCCGCCGCTGTTGGGGCCAACAGCCAGGCCGCGCAGTCCATGCTCAAGCAGGACTACAAG
GACGGCTTGACCCGCGAGGAGGCCGTCGCCCTCGCGCTTAAGGTCCTCAGCAAGACCATG
GACTCCACCAGCCTGACTGCCGAGAAGCTGGAGCTGGCCGAGGTGTTTCTGCAGCCGGGC
TCCGGGGAGGTACAGTACCAGGTGTGCTCTCCTGAAGCGCTGGGGAAGCTGCTTGCAAAG
TCCGGCCTGACACAGCCAACACCCGAGGCATAA