Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d045183_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:15348748:15353756:1 gene:Zm00001d045183 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger CCCH domain-containing protein 4
Sequence

ATGGCGCACCGGCTGCTGCGGGACGCGCAGGCGGACGGGTGGGAGCGGTCGGACTTCCCC
ATCATCTGCGAGTCATGCCTCGGCGACAACCCCTACGTCCGGATGTTAAGAGCTGAATAT
GACAAAGAATGCAAAATTTGTGCACGTCCTTTTACTGTATTCCGGTGGCGTCCTGGGCGA
GATGCAAGGTACAAGAAGACTGAGATCTGCCAGACATGTTGCAAGCTAAAGAATGTCTGC
CAGGTCTGCCTGCTGGATCTTGAATATGGTCTGCCTGTTCAGGTCCGAGATACAGCACTC
TCTATCAATTCCAATGATGCAATTCCAAGGAGTGATGTCAATCGCGAATATTTTGCAGAA
GAGCATGATAGGAGGGCCAGAGCTGGCATAGACTATGATTCATCCTATGGGAAGGCTCGC
CCAAATGATACCATTCTGAAGCTTCAAAGGACAGCACCATATTACAAGAGGAACAGAGCT
CATGTTTGCAGTTTCTTTGTGCGAGGTGAATGTACAAGAGGAGCTGAGTGCCCTTATCGT
CATGAGATGCCTGAAACTGGGGAGTTATCTCAGCAGAACATTAAAGATCGCTACTATGGA
GTTAATGATCCAGTTGCACTGAAACTTTTGAGCAAGGCAGGTGAGATGCCATCCCTGACA
CCACCAGATGATGAGACTATAAGGACCCTCTACATTGGCGGACTCGATAGCAGAATAACC
GAGCAGGATTTGAGGGATCAGTTTTATGCCCATGGTGAGATCGAGTCCATAAGGATGGTA
CTTCAACGTGCAATCGCATTTGTGACGTATACTACAAGAGAAGGCGCAGAGAAGGCTGCA
GAAGAGCTTGCTAATAAGCTAGTCATCAAGGGCGTGCGCCTGAAGCTGATGTGGGGCAAG
CCTCAGGCCCCAAAGCCTGAGGAGGATGAGTCTGGGAGGCTGGGGCAGGTTTCCCACGGA
GGGCTGCTCCCTAGGGCTGTCATATCTCAGCAGCAGAGCGGTGACCAGCCTCAGCCCCCC
GGGATGGAGGGCCAACAGCAACAGGCTGCACCAGCATCGTACTACTTCAACATTCCAGCA
CCACCAGCAACGGAGCGGACTGTGTATCCATCCATGGATCCACAGAGGATGGGTGCTATA
GTAAAACCACATGACAGTGAAGGCAAACCAGGGCCGCAGCAAGCCGGGCAAGCTCAGGCA
TCAAGCAACCCAGCACAAGGGGGCGGCTATCCTGCACCACCGCCATACTACCATGGTCAG
TATCCACCATACTATCCACCCCCACCACCATACGGTGGCTACATGCCTCCACCGCGCATG
CCCTACCCACCGCAATATCCGCCTTACCAGCCGATGCTAGCTCAACCAGCACAGGTACAG
GCTAGTTCATCTCGGCAACCACCGCATGCAGGTGGAGGGCAGCAGCAGCCGCCTGATGGC
CCTCCAGCTCAGCAGCAGCCACAGCAGCCAATTCAGAACTGA

Peptide Sequence

PEP ID

Zm00001d045183_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:15348748:15353756:1 gene:Zm00001d045183 transcript:Zm00001d045183_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger CCCH domain-containing protein 4
Sequence

MAHRLLRDAQADGWERSDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGR
DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDAIPRSDVNREYFAE
EHDRRARAGIDYDSSYGKARPNDTILKLQRTAPYYKRNRAHVCSFFVRGECTRGAECPYR
HEMPETGELSQQNIKDRYYGVNDPVALKLLSKAGEMPSLTPPDDETIRTLYIGGLDSRIT
EQDLRDQFYAHGEIESIRMVLQRAIAFVTYTTREGAEKAAEELANKLVIKGVRLKLMWGK
PQAPKPEEDESGRLGQVSHGGLLPRAVISQQQSGDQPQPPGMEGQQQQAAPASYYFNIPA
PPATERTVYPSMDPQRMGAIVKPHDSEGKPGPQQAGQAQASSNPAQGGGYPAPPPYYHGQ
YPPYYPPPPPYGGYMPPPRMPYPPQYPPYQPMLAQPAQVQASSSRQPPHAGGGQQQPPDG
PPAQQQPQQPIQN

Transcript Sequence

Transcript ID

Zm00001d045183_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:15348748:15353756:1 gene:Zm00001d045183 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger CCCH domain-containing protein 4
Sequence

GAGGTATTCGGTCAACGATCGGTCGGGACTCCGGACTCGGGAGTCGGCACTCGGGTCTCG
ACGTCTCGTCTCGTCTCGTCTCGCCTGCCCGCAGCCCCTTGGCTTCGTTCCATCCGGCTT
CTCGGCGGCGGCGGAGAGGAGGGGGATGGCGCACCGGCTGCTGCGGGACGCGCAGGCGGA
CGGGTGGGAGCGGTCGGACTTCCCCATCATCTGCGAGTCATGCCTCGGCGACAACCCCTA
CGTCCGGATGTTAAGAGCTGAATATGACAAAGAATGCAAAATTTGTGCACGTCCTTTTAC
TGTATTCCGGTGGCGTCCTGGGCGAGATGCAAGGTACAAGAAGACTGAGATCTGCCAGAC
ATGTTGCAAGCTAAAGAATGTCTGCCAGGTCTGCCTGCTGGATCTTGAATATGGTCTGCC
TGTTCAGGTCCGAGATACAGCACTCTCTATCAATTCCAATGATGCAATTCCAAGGAGTGA
TGTCAATCGCGAATATTTTGCAGAAGAGCATGATAGGAGGGCCAGAGCTGGCATAGACTA
TGATTCATCCTATGGGAAGGCTCGCCCAAATGATACCATTCTGAAGCTTCAAAGGACAGC
ACCATATTACAAGAGGAACAGAGCTCATGTTTGCAGTTTCTTTGTGCGAGGTGAATGTAC
AAGAGGAGCTGAGTGCCCTTATCGTCATGAGATGCCTGAAACTGGGGAGTTATCTCAGCA
GAACATTAAAGATCGCTACTATGGAGTTAATGATCCAGTTGCACTGAAACTTTTGAGCAA
GGCAGGTGAGATGCCATCCCTGACACCACCAGATGATGAGACTATAAGGACCCTCTACAT
TGGCGGACTCGATAGCAGAATAACCGAGCAGGATTTGAGGGATCAGTTTTATGCCCATGG
TGAGATCGAGTCCATAAGGATGGTACTTCAACGTGCAATCGCATTTGTGACGTATACTAC
AAGAGAAGGCGCAGAGAAGGCTGCAGAAGAGCTTGCTAATAAGCTAGTCATCAAGGGCGT
GCGCCTGAAGCTGATGTGGGGCAAGCCTCAGGCCCCAAAGCCTGAGGAGGATGAGTCTGG
GAGGCTGGGGCAGGTTTCCCACGGAGGGCTGCTCCCTAGGGCTGTCATATCTCAGCAGCA
GAGCGGTGACCAGCCTCAGCCCCCCGGGATGGAGGGCCAACAGCAACAGGCTGCACCAGC
ATCGTACTACTTCAACATTCCAGCACCACCAGCAACGGAGCGGACTGTGTATCCATCCAT
GGATCCACAGAGGATGGGTGCTATAGTAAAACCACATGACAGTGAAGGCAAACCAGGGCC
GCAGCAAGCCGGGCAAGCTCAGGCATCAAGCAACCCAGCACAAGGGGGCGGCTATCCTGC
ACCACCGCCATACTACCATGGTCAGTATCCACCATACTATCCACCCCCACCACCATACGG
TGGCTACATGCCTCCACCGCGCATGCCCTACCCACCGCAATATCCGCCTTACCAGCCGAT
GCTAGCTCAACCAGCACAGGTACAGGCTAGTTCATCTCGGCAACCACCGCATGCAGGTGG
AGGGCAGCAGCAGCCGCCTGATGGCCCTCCAGCTCAGCAGCAGCCACAGCAGCCAATTCA
GAACTGAAGTCCTGTCAAGATGTTGGGTATTGGTACTGCTCTAACTGCTCGGCAGGAGAA
TGCAACCCCCGTGGGTCACCAGCTTTCGTAATTTCTTAATTTGTGGTTAACAGTAAAAAC
TTTGTTGTATTGCTTATCAACGTTTGAAGAAAAACCGTGAGATATACCGGATGTATCCAG
CTTCTGGATTTTGTGGTACCTGCTGAGTTTCATCATCTTTTTCAGGTCGACCTAACGACT
AGTAAAAATACTGACGCAAGCTCATAATTGACGCCTGCAACGG