Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d045180_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:9:15322884:15324620:-1 gene:Zm00001d045180 gene_biotype:protein_coding transcript_biotype:protein_coding description:CDK-activating kinase assembly factor MAT1 family protein

Sequence

ATGGTGATGGTGTCAGGCGGCGGGGGGAACGCGTGGGCGAAGGAGATGACCCTCCGCCGC
AGGATAGCCAGCATATTCAACAAGACGCAGGAACACTTCCCTACTCTGAAAGACTACAAC
GATTATCTGGAAGAAGTTGAGGATATGACTTTCAACCTGATCGAAGGGATAGATGTCGAG
GAGATTGAAGCAAAAATTGCAAGATACCAACAGGAAAATGCGGAGCAGATATACTTGTCC
AGAGCTAAAAGGGCGGAAGATCTTGCGGCAGCACTTAAAGCAAGCAGGATGAACCCTGTA
AAGGCCGAAGCAAATGATACGGCTGCTGGGAGTTCTCAGGGTATTAGTGGCGGGGCAGGA
GTTCAGGGCCAGTATGCACCTGCCGCTGTTCTTGGGGGAGTGGCTCAGCCTCGCCCCACA
GGTATGGCGCCCCAACTAATCGGCAGTGGGTCGGATCCTCTGCAAGGAGACGACGAGGAG
ACCAGGAGACTACGCGCAGAGCGAGCAGCACGGGCTGGCGGATGGACTGCTGAATTGAGC
AAGAGAAGAGCGCTGGAGGAGGCGTTTAGCGCCATATTCATCTAG

Peptide Sequence

PEP ID

Zm00001d045180_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:9:15322884:15324620:-1 gene:Zm00001d045180 transcript:Zm00001d045180_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:CDK-activating kinase assembly factor MAT1 family protein

Sequence

MVMVSGGGGNAWAKEMTLRRRIASIFNKTQEHFPTLKDYNDYLEEVEDMTFNLIEGIDVE
EIEAKIARYQQENAEQIYLSRAKRAEDLAAALKASRMNPVKAEANDTAAGSSQGISGGAG
VQGQYAPAAVLGGVAQPRPTGMAPQLIGSGSDPLQGDDEETRRLRAERAARAGGWTAELS
KRRALEEAFSAIFI

Transcript Sequence

Transcript ID

Zm00001d045180_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:15322884:15324620:-1 gene:Zm00001d045180 gene_biotype:protein_coding transcript_biotype:protein_coding description:CDK-activating kinase assembly factor MAT1 family protein

Sequence

GAGTCCACGGCAGTGCAGGACCTGATCCTGCGGTCTAGGCCGCGGCGGTGAGATGGTGAT
GGTGTCAGGCGGCGGGGGGAACGCGTGGGCGAAGGAGATGACCCTCCGCCGCAGGATAGC
CAGCATATTCAACAAGACGCAGGAACACTTCCCTACTCTGAAAGACTACAACGATTATCT
GGAAGAAGTTGAGGATATGACTTTCAACCTGATCGAAGGGATAGATGTCGAGGAGATTGA
AGCAAAAATTGCAAGATACCAACAGGAAAATGCGGAGCAGATATACTTGTCCAGAGCTAA
AAGGGCGGAAGATCTTGCGGCAGCACTTAAAGCAAGCAGGATGAACCCTGTAAAGGCCGA
AGCAAATGATACGGCTGCTGGGAGTTCTCAGGGTATTAGTGGCGGGGCAGGAGTTCAGGG
CCAGTATGCACCTGCCGCTGTTCTTGGGGGAGTGGCTCAGCCTCGCCCCACAGGTATGGC
GCCCCAACTAATCGGCAGTGGGTCGGATCCTCTGCAAGGAGACGACGAGGAGACCAGGAG
ACTACGCGCAGAGCGAGCAGCACGGGCTGGCGGATGGACTGCTGAATTGAGCAAGAGAAG
AGCGCTGGAGGAGGCGTTTAGCGCCATATTCATCTAGGATTAGATCAAAAAGCAACACAT
GGCCTGGAGGAAAGCCAGCATACTTAAAATGGCTGTCAAACTACAAAGCGTTGGATGATC
TGTGTCGTGATTATCTTTGGGACATGGAATTCTCACAAATTGTGGTGAAGCACCCTTTGT
GTGCCTTTGGTTGCAAAAGCATGCTTTCTGT