Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d045171_T027
CDS Infomation	cds chromosome:B73_RefGen_v4:9:15037227:15040433:-1 gene:Zm00001d045171 gene_biotype:protein_coding transcript_biotype:protein_coding description:Telomere-associated protein RIF1
Sequence	ATGAAGCTTGGTGGTCAAAGTCCCAAAAGAATGAGGGACCTATCAAGCTTGTGGGTTCCA CCAGTATACCGGAGACTCTTAAGTGCTGACAAGGCAGAAAGGGACATGGTAGAAAGGTGC CTTATTAAGGTGTCATGTGTTATTCTACCACCTCAACCTCTCCTTTCCAAGGCTGTTGCT TCAGACCTTGAGCAGAAGCTACTCTCCTGTATGGTAAATATGCTTGATGATCCTTCCAAG AAAGTTCAAACTGTGAAGTCATGGGGATGGATTGTATCTTTGCTTGGTCCAGATGCAGTG AACAATAGACCTCTGCTTAATAAACTTATAAAGGTTCCTGAGCAGATGTTTACTGATCTG AATCCACAAGTTCAGGTTGCTACAATGGTTTCCTGGAAAAGTTTGGTGGATGCATTTTTT CCTTCTCAGGCAACTGAGATTGTGGCCCAGCAAACTGTGATTTCCCCATTAAAACCCATT GAACAGGCAAGTGCACAGGTGAAAAGGATAAGATTAATTATGGTGCCTATATGTCGAGTT CTGTCAAGAAGTCGCAATATTGTACTTAGCTCTTCTTGTTTGAGTACATGGCATTACCTT CTACATAGACTTGGTAATCTGATCAATTATTTACCCATTCTGGAGGCTGCTTTTGGACCA ATACTCAAAATAATTTTCTCTTTTGGGATCAATGATCAGAACAAGCCACTGTGGTCATTT TGCTTGAACCTTTTTCTTGATTTTGTTTCATCAAAAAATAGGGTCAGAGAGGATTTATGT GCCCCAGTGAATCAGAACTTGCTAGCTCAATCATGCAAGCATATCAAGGCCTTATTGGAT ATTCAACACATCAAATGGTTACCATGGGATATTAGTTGCTTTAATTTCCAACTCAATATT CTTGGCATAATTCTTAAGCCAGAACTATTCCAGGACATAATTCCTGAAACAATGGTGATT GTTATGGATTCTGCAACAGAGATTTTCAGATTTCTTCTAAAAGGTATTCAAATCGAACTT AGAGAGCAGCGTGCTTATGAACAAGTCAATGAATGCATTACTAACGCGTGCAAGTTTGCA AAGAGGTTGTTGCTGGATCATGTAGGAAAGAATAGTGTTATCAAGTGTGCTGCATTACTG GAATTTGGTCTTCGGTTTATGAAAGTTATTGCGAAGGAACTAGATCATTCTTTGTTAGCT TCTGAAAACATTGAGGTATGCTTAGACATCGAACACATAAAGGAGAACCAACATGCAGAA TGCAGCCCAAAGCTGTCCTTACCAAGAATCAGATCACTCTCTTACATGGAGATGGTTTCT CCAGCAGTTTATGTGACTGCACTGTCTCTGTCCATGATATCTCAGTATACTGGAGAGTTT TCTCATAGAGATGCAGATGAATTAGTTTCAATTCTGGATCCATCATCAGATGCCCTGGAG AATTTTCATACTGCTGTCTCTTTTATGTATATGCAGATCAGGCGGCCAACATGTAACAAG GAAAGATTAAAATGGTTGATGGTTTGGAACTCGTTTGCAAAAAAAATGAACAGTCAAATT ATC

Peptide Sequence

PEP ID	Zm00001d045171_P027
PEP Infomation	pep chromosome:B73_RefGen_v4:9:15037227:15040433:-1 gene:Zm00001d045171 transcript:Zm00001d045171_T027 gene_biotype:protein_coding transcript_biotype:protein_coding description:Telomere-associated protein RIF1
Sequence	MKLGGQSPKRMRDLSSLWVPPVYRRLLSADKAERDMVERCLIKVSCVILPPQPLLSKAVA SDLEQKLLSCMVNMLDDPSKKVQTVKSWGWIVSLLGPDAVNNRPLLNKLIKVPEQMFTDL NPQVQVATMVSWKSLVDAFFPSQATEIVAQQTVISPLKPIEQASAQVKRIRLIMVPICRV LSRSRNIVLSSSCLSTWHYLLHRLGNLINYLPILEAAFGPILKIIFSFGINDQNKPLWSF CLNLFLDFVSSKNRVREDLCAPVNQNLLAQSCKHIKALLDIQHIKWLPWDISCFNFQLNI LGIILKPELFQDIIPETMVIVMDSATEIFRFLLKGIQIELREQRAYEQVNECITNACKFA KRLLLDHVGKNSVIKCAALLEFGLRFMKVIAKELDHSLLASENIEVCLDIEHIKENQHAE CSPKLSLPRIRSLSYMEMVSPAVYVTALSLSMISQYTGEFSHRDADELVSILDPSSDALE NFHTAVSFMYMQIRRPTCNKERLKWLMVWNSFAKKMNSQII

Transcript Sequence

Transcript ID	Zm00001d045171_T027
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:15037227:15040433:-1 gene:Zm00001d045171 gene_biotype:protein_coding transcript_biotype:protein_coding description:Telomere-associated protein RIF1
Sequence	GCTGACCATTTTTTCCTTTTCAAGATCTCAAGGCTATCATGAAGCTTGGTGGTCAAAGTC CCAAAAGAATGAGGGACCTATCAAGCTTGTGGGTTCCACCAGTATACCGGAGACTCTTAA GTGCTGACAAGGCAGAAAGGGACATGGTAGAAAGGTGCCTTATTAAGGTGTCATGTGTTA TTCTACCACCTCAACCTCTCCTTTCCAAGGCTGTTGCTTCAGACCTTGAGCAGAAGCTAC TCTCCTGTATGGTAAATATGCTTGATGATCCTTCCAAGAAAGTTCAAACTGTGAAGTCAT GGGGATGGATTGTATCTTTGCTTGGTCCAGATGCAGTGAACAATAGACCTCTGCTTAATA AACTTATAAAGGTTCCTGAGCAGATGTTTACTGATCTGAATCCACAAGTTCAGGTTGCTA CAATGGTTTCCTGGAAAAGTTTGGTGGATGCATTTTTTCCTTCTCAGGCAACTGAGATTG TGGCCCAGCAAACTGTGATTTCCCCATTAAAACCCATTGAACAGGCAAGTGCACAGGTGA AAAGGATAAGATTAATTATGGTGCCTATATGTCGAGTTCTGTCAAGAAGTCGCAATATTG TACTTAGCTCTTCTTGTTTGAGTACATGGCATTACCTTCTACATAGACTTGGTAATCTGA TCAATTATTTACCCATTCTGGAGGCTGCTTTTGGACCAATACTCAAAATAATTTTCTCTT TTGGGATCAATGATCAGAACAAGCCACTGTGGTCATTTTGCTTGAACCTTTTTCTTGATT TTGTTTCATCAAAAAATAGGGTCAGAGAGGATTTATGTGCCCCAGTGAATCAGAACTTGC TAGCTCAATCATGCAAGCATATCAAGGCCTTATTGGATATTCAACACATCAAATGGTTAC CATGGGATATTAGTTGCTTTAATTTCCAACTCAATATTCTTGGCATAATTCTTAAGCCAG AACTATTCCAGGACATAATTCCTGAAACAATGGTGATTGTTATGGATTCTGCAACAGAGA TTTTCAGATTTCTTCTAAAAGGTATTCAAATCGAACTTAGAGAGCAGCGTGCTTATGAAC AAGTCAATGAATGCATTACTAACGCGTGCAAGTTTGCAAAGAGGTTGTTGCTGGATCATG TAGGAAAGAATAGTGTTATCAAGTGTGCTGCATTACTGGAATTTGGTCTTCGGTTTATGA AAGTTATTGCGAAGGAACTAGATCATTCTTTGTTAGCTTCTGAAAACATTGAGGTATGCT TAGACATCGAACACATAAAGGAGAACCAACATGCAGAATGCAGCCCAAAGCTGTCCTTAC CAAGAATCAGATCACTCTCTTACATGGAGATGGTTTCTCCAGCAGTTTATGTGACTGCAC TGTCTCTGTCCATGATATCTCAGTATACTGGAGAGTTTTCTCATAGAGATGCAGATGAAT TAGTTTCAATTCTGGATCCATCATCAGATGCCCTGGAGAATTTTCATACTGCTGTCTCTT TTATGTATATGCAGATCAGGCGGCCAACATGTAACAAGGAAAGATTAAAATGGTTGATGG TTTGGAACTCGTTTGCAAAAAAAATGAACAGTCAAATTATCT