Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d045145_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:14225302:14227109:-1 gene:Zm00001d045145 gene_biotype:protein_coding transcript_biotype:protein_coding description:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Sequence

ATGGAAAGTGCAGGAGGGGAAGCTCGGCCGGTGCTGCCGCCGCCGCCGCCGCCGGTGCAA
GAGCTCGCCGGCGCAGCGAACGACGTGCCAGCTCGGTACGTCGCGCGCGCAGGCAACGAG
CCCAAGGTCACGGTAACCGCGCCGGTCCCGGTCATCGACCTCGCCCGGCTGTGCCAGCCG
GGCGGCGGCGCCGACGAGGCCTCGAAGCTCCGGCTGGCGCTCGAGTCCTGGGGTCTCTTC
CTGGTGACCAACCACGGCATCGAGGCCACTCTCATGGACGCCATGATGGACGCGTCGAGG
GAGTTCTTCAGGCAGCCGCTCCAGGAGAAGCAGAAGCACAGCAACATGATCGACGGCAAG
CACTTCCAGCTCCAAGGGTACGGGAACGACCGGGTGGCGTCGGAGGACCAGGTCCTGGAC
TGGTGCGACCGCCTTTACCTCTTGGTGGAGCCTCAGGAGGACAGGAGCCTTGACCTATGG
CCCGCATGTCTAAGGGACGTTCTGCACGATTTCACCACAGAGTGCACGAGAGTGAAGGAC
TGCCTGCTTCGAGAAATGGCGAAGGCGCTAGATGAGCTCGGCGACGACGACGACTACTTC
ATCGACCAGTTCGGCGACAGGGCCGACACCCATGCCAGGTTCAGCTACTACCCTCCGTGC
GCGCGGCCGGACCTCGTCTTCGGCCTGAGGCCTCACTCCGACGGCACGTTCCTCTCGCTT
CTCATGCTAGACGACAGCGTCGGCGGGCTTCAGGTTTTCCGGGACGGAGCCTGGTACGAC
GTGCGCACCAGACCTCACACCCTGCTCGTCAATCTAGGAGACCAAATAGAGATAATAAGC
AATGGGATCTTCAAGAGCCCAGTGCACCGGGTTGTAACAAACGCGGAGAAAGAGAGGCTA
TCAGTGGTTCTGTTCTATTCTATAGATCCTGAGAGAGAAATCCGGCCCGCTGACAAACTG
ATAGACGAGAACCATCCAGCACTATACAAGAAGGTGAAAGTCAAAGAATATACTGCTGGA
CTCTACGAACATTTCTCTCGAGGGAAATTGGTTAAAGAGACTGCAAAGATATAG

Peptide Sequence

PEP ID

Zm00001d045145_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:14225302:14227109:-1 gene:Zm00001d045145 transcript:Zm00001d045145_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Sequence

MESAGGEARPVLPPPPPPVQELAGAANDVPARYVARAGNEPKVTVTAPVPVIDLARLCQP
GGGADEASKLRLALESWGLFLVTNHGIEATLMDAMMDASREFFRQPLQEKQKHSNMIDGK
HFQLQGYGNDRVASEDQVLDWCDRLYLLVEPQEDRSLDLWPACLRDVLHDFTTECTRVKD
CLLREMAKALDELGDDDDYFIDQFGDRADTHARFSYYPPCARPDLVFGLRPHSDGTFLSL
LMLDDSVGGLQVFRDGAWYDVRTRPHTLLVNLGDQIEIISNGIFKSPVHRVVTNAEKERL
SVVLFYSIDPEREIRPADKLIDENHPALYKKVKVKEYTAGLYEHFSRGKLVKETAKI

Transcript Sequence

Transcript ID

Zm00001d045145_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:14225302:14227109:-1 gene:Zm00001d045145 gene_biotype:protein_coding transcript_biotype:protein_coding description:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Sequence

GTGCTATCGTCGGTTCGTCGGGCGTAGCGGCAGCGATGATATTTTAGTCGTACTCGTACA
GAAGCCACAGCCCTCTGCTAGCTAGCTAGCTCCTGCTAGAATGGAAAGTGCAGGAGGGGA
AGCTCGGCCGGTGCTGCCGCCGCCGCCGCCGCCGGTGCAAGAGCTCGCCGGCGCAGCGAA
CGACGTGCCAGCTCGGTACGTCGCGCGCGCAGGCAACGAGCCCAAGGTCACGGTAACCGC
GCCGGTCCCGGTCATCGACCTCGCCCGGCTGTGCCAGCCGGGCGGCGGCGCCGACGAGGC
CTCGAAGCTCCGGCTGGCGCTCGAGTCCTGGGGTCTCTTCCTGGTGACCAACCACGGCAT
CGAGGCCACTCTCATGGACGCCATGATGGACGCGTCGAGGGAGTTCTTCAGGCAGCCGCT
CCAGGAGAAGCAGAAGCACAGCAACATGATCGACGGCAAGCACTTCCAGCTCCAAGGGTA
CGGGAACGACCGGGTGGCGTCGGAGGACCAGGTCCTGGACTGGTGCGACCGCCTTTACCT
CTTGGTGGAGCCTCAGGAGGACAGGAGCCTTGACCTATGGCCCGCATGTCTAAGGGACGT
TCTGCACGATTTCACCACAGAGTGCACGAGAGTGAAGGACTGCCTGCTTCGAGAAATGGC
GAAGGCGCTAGATGAGCTCGGCGACGACGACGACTACTTCATCGACCAGTTCGGCGACAG
GGCCGACACCCATGCCAGGTTCAGCTACTACCCTCCGTGCGCGCGGCCGGACCTCGTCTT
CGGCCTGAGGCCTCACTCCGACGGCACGTTCCTCTCGCTTCTCATGCTAGACGACAGCGT
CGGCGGGCTTCAGGTTTTCCGGGACGGAGCCTGGTACGACGTGCGCACCAGACCTCACAC
CCTGCTCGTCAATCTAGGAGACCAAATAGAGATAATAAGCAATGGGATCTTCAAGAGCCC
AGTGCACCGGGTTGTAACAAACGCGGAGAAAGAGAGGCTATCAGTGGTTCTGTTCTATTC
TATAGATCCTGAGAGAGAAATCCGGCCCGCTGACAAACTGATAGACGAGAACCATCCAGC
ACTATACAAGAAGGTGAAAGTCAAAGAATATACTGCTGGACTCTACGAACATTTCTCTCG
AGGGAAATTGGTTAAAGAGACTGCAAAGATATAGCTTGTTCGCTTTGGATTAAATCCATG
GACTAATCCTTAGAGACAAAAACACTGTATAAGTAGTAAAAGTCGGTACGAATTAAAGCT
CAAGCTAGTCGTATCTATGTAATGAATAAGGGTGAAACCTTTGCGATCCTAGATAATAAA
TGAAATTAATTTTTAATAAAATAAAGTGTATATAGTTCGTTGCAG