Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d045124_T020
CDS Infomation	cds chromosome:B73_RefGen_v4:9:13598611:13604179:-1 gene:Zm00001d045124 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain
Sequence	ATGATGGAGGAGTACGAGAAGCTGGCCGCCGCGGCGCCCGACGGCTCCGCCAAGCTCCGG GTCTTCCTCTTCCCGGCCTCCGGGGCCGACGCGGGGCCCCATCTCGCCGCCGTGGTGGAC GAGTCCGGGCAGCGGTACATCGACGCCATCAACTGCGTCTCCACGGAGGCCATTGCCACG GCCACGGCCATGCGGCGGAAGGACGGCGTCGCCAGCGCCGGCTCCTCCGCGCACAACTCC GAGGCGGCCGAGTACAGCGGTCTAGTCGAAAGTACGTCGCCGCGGGCGGTGCCGCCGCCT GCTTCCGTTGCGACTGAGTATTCGTATTCAGGTGGAGCGCATTACCTCCGTGCTTTCCCG GAGTCGGTTGGGCTCACTGCAGTCTCGGCGTCACCTCTGGCGATGGGCATCCCGGCTCAA AACCCCATCCTGGTTAGGACAGAGCAGTCGACGTTGCCGCCTCATCAGGTTGCTGCTGTT TATGCAGCAGCAACACAGCATCAGCCGCCTCAAGTGACCACTTATGTGCAGGAGCAGCAG CAGCAGCAGCCTCAAGGCACCCATTACGTACCACAACAGCAGCCTCAGTCTGCTGCTTAT GTGCAGCAGATGCCGCAGTCGTATATAGAGCCGCAGCAGGTACACTACATCAACGCCCAA CAATTTGGTGTGCATGGGGTGCCACAATCTGTCAACTATGTGCCTGTGCAAATGAGCCAA TTCATGCCCAACATTCCTGTGACGGGCTCTATGGCGACCACTGCTGCTCAAGTGGGAAAG TTGAAGCCCGCTTCCGCAGGTGTAGAACCTGTTCCAGAGACCACGCAGTTCACAAGGCCA GTGCAAGCTCAGGTTGATCAGAGTTACCGGGTGGTGCACACTCCACTGTCACAGCTTCCT CCTTTGTCTTCTGTGCATCTGCAGACAAATGATGCGCAGAGGCAGAAATTTGGTGCCCAA CAAGCGATGACAAGCGCAGTAAGCATGCCAGTGGTGACCAGCTCAGGCACAATTCCTGTT GTGGTTAGCTCGGCCACTGTTCCATCATTGAGGTATGATGGTTGCACAATGTGCCAAAAA GCATTGCCACATGCCCATTCGGATAATACTATCCGGGAGCAGGGAAGTTCTTGTGCAATG GGCAACCTTGAGGCAGCTCCAATGTTTTACAGCCCACATCAAGGCACCGCATCCAACAAA TCTAATCCAGGTGCAAGTTCAGGAACACTCACGAACTATGTGGCAGAACCAAGAGCTGGG AACACAGCAGTGATGGCACAATTTGATTCGACTCTTCCTGCCAGAAAACCTGCAGTCCAG GCGACTGCATATGCGGATACAGTTGTGCCGGTTCAACCCACCATTATTGCTTTCCCAGTG TCTAGTGCACCTGCTCCAAAAGGAGTATTTGTGGGTCATTCTCCTTCGGCTGGGGCTGAA GATCATGTCAGGTACCAGCAGCAACCATTCTCTTATAGCATGCAACCGCCGCTAGTTCCA GTGAATGTCCCACAAGGCATTGGTGCCAGTGCATACAAAGATTCAAATCATGCAGCAGTG GAACCGCTTAGAGAATATGCCCGTGATCTTCCTCATGACTATGCTAGAGCTATTGATGCT CGTATGCATGCAGTTCATTTGGGTCCTATTGCACCACCAGAATCTAGTGTGCAAGGAAAT CCTTCTATTCCTCATGTTGTCATTGATCATGCCAAAGTTGGGAAGCCACCTGTAAATAAT GATGTTACTTCTTTCTGCAAATCTCAAGCTGGAGGGTATCATATGGGGATCACAAATGCC TTTACTGCTCCTGTTTTAACCCAAGAGGACAACATTGCCAGGCACAGTGAGCAGCCACCT TGTGATTTTGATGTTGGTGCACAAAATGTCCAACCTGACATAATCCAGCGACCACCACTC AATCTGCCTGTCCAGAGCAACCTTAGAGTTCCGATTGAACCACCTGTTTCTAATGAAAAG TTCACCGTTCAACCATCTAACTCTGGTGCTCAGCTTCCTGCTGGGCCTCCTCTACAGCAT CCTAAGGAAATGCCCAATCACTTGGTTTGTGCTCTCCCCAATCGTAGCAGTAAATTTCAA TTGCAGGCTACTGTTGGAATTGATCGTGTTGAAGCTACACAAGAACCAGCATACACTGAT TCACTTTTCTCAAATCAGGATCCTTGGAAAGCAGTGGGCAATGCTTCTTTAGTGCCTCCA AGACCAAGCAAGTTAACTAAGGAACCTGTTGTTTCTGGAGGTCAATATGCTGATGGTCAT ATGCCTGATATGAACACACATGCTGCCTTACTCTTTGAAGAAGACCCAAGTTTAAAGGAT ATCCACACAGTTAAATTGAACAAAGGATTTGGGAAAGCTAATATTAAGCGACAATTACAA GATGTTGCTGAAGGGGTAGCAGCATCAGTTCTTCAGCCATCCTTTCCTGAAAAACCAGCT GCATTCTCTGGGGATCACATCGATTCACATGGAGCAGTAATTGATGTGAAAGTTCAGGGT GAAGGGAATAATCAGTCAGACAAAACAAGCCAGGGGATTCAAGTTTTAGATGACATCGAT AAACTTCAGATAATAAAGAACAGTGACCTTGAGGAATTGCGTGAACTGGGTTCTGGAACC ATTGGTACTGTGTACCATGGAAAGTGGAGAGGCTCAGATGTTGCTATAAAGAGAATCAAC GAGCGATGTTTTGCTGGGAAGGCATCTGAGCAAGAGCGTATGAGGACTGATTTCTGGAAT GAGGCAGACAAGCTTGCATCTTTGCACCATCCAAACGTAGTAGCATTGTACGGTGTTGTT CTAGATGGACCTGGTGGATCTGTTGCAACGGTAACGGAGTACATGGCTAATGGCTCACTC CGACAAGCATTGCAAAGACATGAAAAGATCTTTGATCGGCGTAGACGTCTATTAATTGCA ATGGATGTTGCTTTTGGAATGGAATATCTCCATGGGAAGAATATAGTGCATTTCGACTTG AACAGTGACAATCTGCTTGTCAACCTAAGGTATCCTCAACGACCAATATGCAAGGTTGGT GATTTGGGATTATCAAAGGTCAAATGCCAGACACTTATCTCTGGTGGAGTGAGAGGAACA CTACCTTGGATGGCCCCTGAGTTGTTGAATGGCAGCAGCAGCCTCGTCTCTGAAAAGGTT GACGTTTTCTCGTTTGGCATCGTGATGTGGGAGCTACTCACGGGTGAAGAGCCTTACGCC GAACTGCACTACGGTGCCATTATAGGTGGGATCGTGAATAACACGCTGCGACCTCCGGTG CCCGAGTCCTGTGACCCCCAGTGGAGGTCACTGATGGAGCAGTGCTGGTCAGCCGAACCC TCGGCGAGGCCGAGCTTCACCGAGGTAGGCACGAATCTGCGCGCCATGGCGGCCGCTCCT ACCAAGGCACAACAATCGAAATAG

Peptide Sequence

PEP ID	Zm00001d045124_P020
PEP Infomation	pep chromosome:B73_RefGen_v4:9:13598611:13604179:-1 gene:Zm00001d045124 transcript:Zm00001d045124_T020 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain
Sequence	MMEEYEKLAAAAPDGSAKLRVFLFPASGADAGPHLAAVVDESGQRYIDAINCVSTEAIAT ATAMRRKDGVASAGSSAHNSEAAEYSGLVESTSPRAVPPPASVATEYSYSGGAHYLRAFP ESVGLTAVSASPLAMGIPAQNPILVRTEQSTLPPHQVAAVYAAATQHQPPQVTTYVQEQQ QQQPQGTHYVPQQQPQSAAYVQQMPQSYIEPQQVHYINAQQFGVHGVPQSVNYVPVQMSQ FMPNIPVTGSMATTAAQVGKLKPASAGVEPVPETTQFTRPVQAQVDQSYRVVHTPLSQLP PLSSVHLQTNDAQRQKFGAQQAMTSAVSMPVVTSSGTIPVVVSSATVPSLRYDGCTMCQK ALPHAHSDNTIREQGSSCAMGNLEAAPMFYSPHQGTASNKSNPGASSGTLTNYVAEPRAG NTAVMAQFDSTLPARKPAVQATAYADTVVPVQPTIIAFPVSSAPAPKGVFVGHSPSAGAE DHVRYQQQPFSYSMQPPLVPVNVPQGIGASAYKDSNHAAVEPLREYARDLPHDYARAIDA RMHAVHLGPIAPPESSVQGNPSIPHVVIDHAKVGKPPVNNDVTSFCKSQAGGYHMGITNA FTAPVLTQEDNIARHSEQPPCDFDVGAQNVQPDIIQRPPLNLPVQSNLRVPIEPPVSNEK FTVQPSNSGAQLPAGPPLQHPKEMPNHLVCALPNRSSKFQLQATVGIDRVEATQEPAYTD SLFSNQDPWKAVGNASLVPPRPSKLTKEPVVSGGQYADGHMPDMNTHAALLFEEDPSLKD IHTVKLNKGFGKANIKRQLQDVAEGVAASVLQPSFPEKPAAFSGDHIDSHGAVIDVKVQG EGNNQSDKTSQGIQVLDDIDKLQIIKNSDLEELRELGSGTIGTVYHGKWRGSDVAIKRIN ERCFAGKASEQERMRTDFWNEADKLASLHHPNVVALYGVVLDGPGGSVATVTEYMANGSL RQALQRHEKIFDRRRRLLIAMDVAFGMEYLHGKNIVHFDLNSDNLLVNLRYPQRPICKVG DLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYA ELHYGAIIGGIVNNTLRPPVPESCDPQWRSLMEQCWSAEPSARPSFTEVGTNLRAMAAAP TKAQQSK

Transcript Sequence

Transcript ID	Zm00001d045124_T020
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:13598611:13604179:-1 gene:Zm00001d045124 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain
Sequence	CGCAGTCGAGCGGAGCGGAGCCAACCTCCTGCAGTGCCAGGCGCGTCCGGGGCCGAGGGG CGACGGCCAACCGAACGGGAGAGTGTCAAGTCAAGTGGGCGGATTGCGGGAAGGAAGGAA AACCTCCCGCGCGACTCGCGCCTCCGCCCTCCTCGTCCTCGTCCTCGTCCTCCATTCCAA CCCCTGCGTTTCGGATTCTGTTGCGCCCTCTCCAGAGCCTCGGCGAGCGGTACGTGGGCG GCCAGACGCGGCTCATCTCCGCCCCGCGCGCCGCCTCCTTCGCGGACCTGCTGCGGAAGG TGGAGGCGGTGGACGAGGCCTCGGCCTCCTCTGGCGGCGGGGTGGTCCTCAGGTACCAGC TCCCCGGGGATGACCTCGACTCGCTCATCTCCGTGTCCGGCCCGGAGGACTACGACAACA TGATGGAGGAGTACGAGAAGCTGGCCGCCGCGGCGCCCGACGGCTCCGCCAAGCTCCGGG TCTTCCTCTTCCCGGCCTCCGGGGCCGACGCGGGGCCCCATCTCGCCGCCGTGGTGGACG AGTCCGGGCAGCGGTACATCGACGCCATCAACTGCGTCTCCACGGAGGCCATTGCCACGG CCACGGCCATGCGGCGGAAGGACGGCGTCGCCAGCGCCGGCTCCTCCGCGCACAACTCCG AGGCGGCCGAGTACAGCGGTCTAGTCGAAAGTACGTCGCCGCGGGCGGTGCCGCCGCCTG CTTCCGTTGCGACTGAGTATTCGTATTCAGGTGGAGCGCATTACCTCCGTGCTTTCCCGG AGTCGGTTGGGCTCACTGCAGTCTCGGCGTCACCTCTGGCGATGGGCATCCCGGCTCAAA ACCCCATCCTGGTTAGGACAGAGCAGTCGACGTTGCCGCCTCATCAGGTTGCTGCTGTTT ATGCAGCAGCAACACAGCATCAGCCGCCTCAAGTGACCACTTATGTGCAGGAGCAGCAGC AGCAGCAGCCTCAAGGCACCCATTACGTACCACAACAGCAGCCTCAGTCTGCTGCTTATG TGCAGCAGATGCCGCAGTCGTATATAGAGCCGCAGCAGGTACACTACATCAACGCCCAAC AATTTGGTGTGCATGGGGTGCCACAATCTGTCAACTATGTGCCTGTGCAAATGAGCCAAT TCATGCCCAACATTCCTGTGACGGGCTCTATGGCGACCACTGCTGCTCAAGTGGGAAAGT TGAAGCCCGCTTCCGCAGGTGTAGAACCTGTTCCAGAGACCACGCAGTTCACAAGGCCAG TGCAAGCTCAGGTTGATCAGAGTTACCGGGTGGTGCACACTCCACTGTCACAGCTTCCTC CTTTGTCTTCTGTGCATCTGCAGACAAATGATGCGCAGAGGCAGAAATTTGGTGCCCAAC AAGCGATGACAAGCGCAGTAAGCATGCCAGTGGTGACCAGCTCAGGCACAATTCCTGTTG TGGTTAGCTCGGCCACTGTTCCATCATTGAGGTATGATGGTTGCACAATGTGCCAAAAAG CATTGCCACATGCCCATTCGGATAATACTATCCGGGAGCAGGGAAGTTCTTGTGCAATGG GCAACCTTGAGGCAGCTCCAATGTTTTACAGCCCACATCAAGGCACCGCATCCAACAAAT CTAATCCAGGTGCAAGTTCAGGAACACTCACGAACTATGTGGCAGAACCAAGAGCTGGGA ACACAGCAGTGATGGCACAATTTGATTCGACTCTTCCTGCCAGAAAACCTGCAGTCCAGG CGACTGCATATGCGGATACAGTTGTGCCGGTTCAACCCACCATTATTGCTTTCCCAGTGT CTAGTGCACCTGCTCCAAAAGGAGTATTTGTGGGTCATTCTCCTTCGGCTGGGGCTGAAG ATCATGTCAGGTACCAGCAGCAACCATTCTCTTATAGCATGCAACCGCCGCTAGTTCCAG TGAATGTCCCACAAGGCATTGGTGCCAGTGCATACAAAGATTCAAATCATGCAGCAGTGG AACCGCTTAGAGAATATGCCCGTGATCTTCCTCATGACTATGCTAGAGCTATTGATGCTC GTATGCATGCAGTTCATTTGGGTCCTATTGCACCACCAGAATCTAGTGTGCAAGGAAATC CTTCTATTCCTCATGTTGTCATTGATCATGCCAAAGTTGGGAAGCCACCTGTAAATAATG ATGTTACTTCTTTCTGCAAATCTCAAGCTGGAGGGTATCATATGGGGATCACAAATGCCT TTACTGCTCCTGTTTTAACCCAAGAGGACAACATTGCCAGGCACAGTGAGCAGCCACCTT GTGATTTTGATGTTGGTGCACAAAATGTCCAACCTGACATAATCCAGCGACCACCACTCA ATCTGCCTGTCCAGAGCAACCTTAGAGTTCCGATTGAACCACCTGTTTCTAATGAAAAGT TCACCGTTCAACCATCTAACTCTGGTGCTCAGCTTCCTGCTGGGCCTCCTCTACAGCATC CTAAGGAAATGCCCAATCACTTGGTTTGTGCTCTCCCCAATCGTAGCAGTAAATTTCAAT TGCAGGCTACTGTTGGAATTGATCGTGTTGAAGCTACACAAGAACCAGCATACACTGATT CACTTTTCTCAAATCAGGATCCTTGGAAAGCAGTGGGCAATGCTTCTTTAGTGCCTCCAA GACCAAGCAAGTTAACTAAGGAACCTGTTGTTTCTGGAGGTCAATATGCTGATGGTCATA TGCCTGATATGAACACACATGCTGCCTTACTCTTTGAAGAAGACCCAAGTTTAAAGGATA TCCACACAGTTAAATTGAACAAAGGATTTGGGAAAGCTAATATTAAGCGACAATTACAAG ATGTTGCTGAAGGGGTAGCAGCATCAGTTCTTCAGCCATCCTTTCCTGAAAAACCAGCTG CATTCTCTGGGGATCACATCGATTCACATGGAGCAGTAATTGATGTGAAAGTTCAGGGTG AAGGGAATAATCAGTCAGACAAAACAAGCCAGGGGATTCAAGTTTTAGATGACATCGATA AACTTCAGATAATAAAGAACAGTGACCTTGAGGAATTGCGTGAACTGGGTTCTGGAACCA TTGGTACTGTGTACCATGGAAAGTGGAGAGGCTCAGATGTTGCTATAAAGAGAATCAACG AGCGATGTTTTGCTGGGAAGGCATCTGAGCAAGAGCGTATGAGGACTGATTTCTGGAATG AGGCAGACAAGCTTGCATCTTTGCACCATCCAAACGTAGTAGCATTGTACGGTGTTGTTC TAGATGGACCTGGTGGATCTGTTGCAACGGTAACGGAGTACATGGCTAATGGCTCACTCC GACAAGCATTGCAAAGACATGAAAAGATCTTTGATCGGCGTAGACGTCTATTAATTGCAA TGGATGTTGCTTTTGGAATGGAATATCTCCATGGGAAGAATATAGTGCATTTCGACTTGA ACAGTGACAATCTGCTTGTCAACCTAAGGTATCCTCAACGACCAATATGCAAGGTTGGTG ATTTGGGATTATCAAAGGTCAAATGCCAGACACTTATCTCTGGTGGAGTGAGAGGAACAC TACCTTGGATGGCCCCTGAGTTGTTGAATGGCAGCAGCAGCCTCGTCTCTGAAAAGGTTG ACGTTTTCTCGTTTGGCATCGTGATGTGGGAGCTACTCACGGGTGAAGAGCCTTACGCCG AACTGCACTACGGTGCCATTATAGGTGGGATCGTGAATAACACGCTGCGACCTCCGGTGC CCGAGTCCTGTGACCCCCAGTGGAGGTCACTGATGGAGCAGTGCTGGTCAGCCGAACCCT CGGCGAGGCCGAGCTTCACCGAGGTAGGCACGAATCTGCGCGCCATGGCGGCCGCTCCTA CCAAGGCACAACAATCGAAATAGACGGTTTTAGCCTTCTGCCTCCTGCGCCACCTTCTTT TTAGCAGGCTGTTTCAGTCTTCAAACCGAGGAGGTGCCGTCCCTAGCCTAGCCTGGCTTT TTTTTTTTGTACATGAATAAGTTGAAGAAAGATAGGAGAATGT