Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d045109_T034
CDS Infomation	cds chromosome:B73_RefGen_v4:9:13093387:13105513:1 gene:Zm00001d045109 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative homeodomain-like transcription factor superfamily protein
Sequence	ATGCAGCTGCTGGACAAGATGATGGTGAAACTGAAAGAGCAGGGTCATAGAGTTCTAATT TATTCACAGTTCCAGCACATGTTGGACTTGCTGGAGGACTATTTAAGTTACAGGAAATGG ACTTATGAACGCATCGATGGCAAGATAAGTGGCGCTGATAGGCAGATACGGATAGATCGC TTCAACGCTAAGAATTCAACTAGGTTTTGCTTTCTTCTTTCTACTAGAGCTGGTGGTCTG GGAATAAACTTGGCAACTGCAGATACTGTAATCATCTATGACAGTGATTGGAACCCACAT GCGGATTTGCAAGCTATGGCAAGAGCTCATCGCTTAGGACAGACTAGTAAGGTGATGATA TACAGGCTTGTTAGCCGAGGTACAATTGAGGAGCGAATGATGCAGCTTACAAAAAAGAAG ATTTTATTGGAGCACTTAGTTGTTGGTCGACTCACCAAAGCTAATAATGTCAATCAGGAG GAGTTGGATGATATTATACGCTATGGATCAAAGGAGCTTTTTGAAGACGAGAATGATGAA TCTCGCCAAATTCATTATGACGAAGCTGCAATTGAGAGGTTGTTAGACCGTGATCAAGTT GACGGTGATGAATCTGTGGAAGATGAAGAAGAAGATGGATTCTTAAAAGGATTCAAGGTT GCAAACTTTGAATATATCGATGAGGCAAAGGCTCAGGCAGAAAAAGAGGAGGCACGGAGA AAGGCTGCAGCTGAGGCTGAAAATTCTGAAAGAAACTACTGGGATGAACTATTGAAGGAT AGATATGATGTACAGAAAGTTGAAGAACATACTGCTATGGGAAAAGGGAAAAGAAGCCGC AAACAGATGGCTGCCGCTGATGAAGATGACATTCATGATTTAAGTTCCGAAGATGAGGAT TACTCATTGGAGGATGACATTTCAGATAATGACACAAGTTTGCAAGGAAATATTTCTGGG AAGAGGGGCCAATATTCTAAGAGAAAATCACGTAATGTTGATTCTATTCCATTGATGGAG GGCGAAGGACGTACCTTGAGAGTTCTTGGATTCAACCATGCTCAACGAGCAATGTTCCTA CAGACACTCAATAGATTCGGTTTTCAGAATTATGACTGGAAAGAGTATCTTCCTCGTCTT AAAGGAAAAAGTGTCGAGGAAATCCAGAGATATGCTGAACTTGTCATGGCACATCTTGTT GAAGAAATTAATGATTCTGACTATTTTTCAGATGGCGTTCCAAAGGAAATGATGCGTGTT GATGATGTACTAGTCAGGATAGCAAACATATCCCTTATTGAGGAGAAGATGGCTGCCACA GGACCAGGAAAAATTACAAACATTTTTCCTAATTACTTGCTCTATGAGTTCCAAGGCTTA TCTGGTGGAAGAATATGGAAAGCGGAGCATGATCTACTGTTACTGAGAGGCATACTGAAG CATGGATATGCAAGGTGGCAGTATATATCAGATGACAGAGAGAATGGGCTTTTTGAGGCT GCACGACGAGAGCTTCATCTCCCTTCGGTTAATGAAATAATTGGTGCTCAGTTGAACGAG GCAAATGGGAATTTGGAAGGTGCACAGGAAGGCCAAGCGAACACAACAAGCATGTCGCAT TACAAGGAGATCCAGAGAAAGATAGTTGAGTTCTTGAGAAAGAGATATCATCTTATGGAG AGAGCCTTGAATATGGAATATGCTGTGATAAAGAAAAAAATTCCTGTTCCTGATGATATT ACTGAACAAGGTGTTCCAGCAGGACATGCTCCTTTTATTCCAGATATCAGTGAACTGTTG CGGGAATTGCCCAATCTTGAGCCAATTTCTACCAATGAATTGGTTTCTGAGGGCACAGCT GGTCAGTTACAAGTTCCCCATCTCTACAATAAGATGTGTGGAGTGCTTGAAGAGAGTGGT GCTTATGCGCTCAGTTCCTTCTTTGGAGACAAGTCCGCATCTTCTAGTTTGGCCAATAGC CTTCGACAGTTTGAAACTGTGTGCGAGAATGTCGTCGAGGCCTTGCGACCACACCAAAAT GGTACTGGCAGTGCCATCAAAGAGGAATTGGTAGATGCAGCCACCAAAGCAGCAGCAGCA GCAGCTCCTCAACAAGATTCAGGCCATGATGCACCGCATGGGCAGTCTTCGACAGCCAAG GCGGACATGGAAATCGATGGTTGA

Peptide Sequence

PEP ID	Zm00001d045109_P034
PEP Infomation	pep chromosome:B73_RefGen_v4:9:13093387:13105513:1 gene:Zm00001d045109 transcript:Zm00001d045109_T034 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative homeodomain-like transcription factor superfamily protein
Sequence	MQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYRKWTYERIDGKISGADRQIRIDR FNAKNSTRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTSKVMI YRLVSRGTIEERMMQLTKKKILLEHLVVGRLTKANNVNQEELDDIIRYGSKELFEDENDE SRQIHYDEAAIERLLDRDQVDGDESVEDEEEDGFLKGFKVANFEYIDEAKAQAEKEEARR KAAAEAENSERNYWDELLKDRYDVQKVEEHTAMGKGKRSRKQMAAADEDDIHDLSSEDED YSLEDDISDNDTSLQGNISGKRGQYSKRKSRNVDSIPLMEGEGRTLRVLGFNHAQRAMFL QTLNRFGFQNYDWKEYLPRLKGKSVEEIQRYAELVMAHLVEEINDSDYFSDGVPKEMMRV DDVLVRIANISLIEEKMAATGPGKITNIFPNYLLYEFQGLSGGRIWKAEHDLLLLRGILK HGYARWQYISDDRENGLFEAARRELHLPSVNEIIGAQLNEANGNLEGAQEGQANTTSMSH YKEIQRKIVEFLRKRYHLMERALNMEYAVIKKKIPVPDDITEQGVPAGHAPFIPDISELL RELPNLEPISTNELVSEGTAGQLQVPHLYNKMCGVLEESGAYALSSFFGDKSASSSLANS LRQFETVCENVVEALRPHQNGTGSAIKEELVDAATKAAAAAAPQQDSGHDAPHGQSSTAK ADMEIDG

Transcript Sequence

Transcript ID	Zm00001d045109_T034
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:13093387:13105513:1 gene:Zm00001d045109 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative homeodomain-like transcription factor superfamily protein
Sequence	GGAGGCTTCTAGATTCATCAGGTAAGATGCAGCTGCTGGACAAGATGATGGTGAAACTGA AAGAGCAGGGTCATAGAGTTCTAATTTATTCACAGTTCCAGCACATGTTGGACTTGCTGG AGGACTATTTAAGTTACAGGAAATGGACTTATGAACGCATCGATGGCAAGATAAGTGGCG CTGATAGGCAGATACGGATAGATCGCTTCAACGCTAAGAATTCAACTAGGTTTTGCTTTC TTCTTTCTACTAGAGCTGGTGGTCTGGGAATAAACTTGGCAACTGCAGATACTGTAATCA TCTATGACAGTGATTGGAACCCACATGCGGATTTGCAAGCTATGGCAAGAGCTCATCGCT TAGGACAGACTAGTAAGGTGATGATATACAGGCTTGTTAGCCGAGGTACAATTGAGGAGC GAATGATGCAGCTTACAAAAAAGAAGATTTTATTGGAGCACTTAGTTGTTGGTCGACTCA CCAAAGCTAATAATGTCAATCAGGAGGAGTTGGATGATATTATACGCTATGGATCAAAGG AGCTTTTTGAAGACGAGAATGATGAATCTCGCCAAATTCATTATGACGAAGCTGCAATTG AGAGGTTGTTAGACCGTGATCAAGTTGACGGTGATGAATCTGTGGAAGATGAAGAAGAAG ATGGATTCTTAAAAGGATTCAAGGTTGCAAACTTTGAATATATCGATGAGGCAAAGGCTC AGGCAGAAAAAGAGGAGGCACGGAGAAAGGCTGCAGCTGAGGCTGAAAATTCTGAAAGAA ACTACTGGGATGAACTATTGAAGGATAGATATGATGTACAGAAAGTTGAAGAACATACTG CTATGGGAAAAGGGAAAAGAAGCCGCAAACAGATGGCTGCCGCTGATGAAGATGACATTC ATGATTTAAGTTCCGAAGATGAGGATTACTCATTGGAGGATGACATTTCAGATAATGACA CAAGTTTGCAAGGAAATATTTCTGGGAAGAGGGGCCAATATTCTAAGAGAAAATCACGTA ATGTTGATTCTATTCCATTGATGGAGGGCGAAGGACGTACCTTGAGAGTTCTTGGATTCA ACCATGCTCAACGAGCAATGTTCCTACAGACACTCAATAGATTCGGTTTTCAGAATTATG ACTGGAAAGAGTATCTTCCTCGTCTTAAAGGAAAAAGTGTCGAGGAAATCCAGAGATATG CTGAACTTGTCATGGCACATCTTGTTGAAGAAATTAATGATTCTGACTATTTTTCAGATG GCGTTCCAAAGGAAATGATGCGTGTTGATGATGTACTAGTCAGGATAGCAAACATATCCC TTATTGAGGAGAAGATGGCTGCCACAGGACCAGGAAAAATTACAAACATTTTTCCTAATT ACTTGCTCTATGAGTTCCAAGGCTTATCTGGTGGAAGAATATGGAAAGCGGAGCATGATC TACTGTTACTGAGAGGCATACTGAAGCATGGATATGCAAGGTGGCAGTATATATCAGATG ACAGAGAGAATGGGCTTTTTGAGGCTGCACGACGAGAGCTTCATCTCCCTTCGGTTAATG AAATAATTGGTGCTCAGTTGAACGAGGCAAATGGGAATTTGGAAGGTGCACAGGAAGGCC AAGCGAACACAACAAGCATGTCGCATTACAAGGAGATCCAGAGAAAGATAGTTGAGTTCT TGAGAAAGAGATATCATCTTATGGAGAGAGCCTTGAATATGGAATATGCTGTGATAAAGA AAAAAATTCCTGTTCCTGATGATATTACTGAACAAGGTGTTCCAGCAGGACATGCTCCTT TTATTCCAGATATCAGTGAACTGTTGCGGGAATTGCCCAATCTTGAGCCAATTTCTACCA ATGAATTGGTTTCTGAGGGCACAGCTGGTCAGTTACAAGTTCCCCATCTCTACAATAAGA TGTGTGGAGTGCTTGAAGAGAGTGGTGCTTATGCGCTCAGTTCCTTCTTTGGAGACAAGT CCGCATCTTCTAGTTTGGCCAATAGCCTTCGACAGTTTGAAACTGTGTGCGAGAATGTCG TCGAGGCCTTGCGACCACACCAAAATGGTACTGGCAGTGCCATCAAAGAGGAATTGGTAG ATGCAGCCACCAAAGCAGCAGCAGCAGCAGCTCCTCAACAAGATTCAGGCCATGATGCAC CGCATGGGCAGTCTTCGACAGCCAAGGCGGACATGGAAATCGATGGTTGATTTGTAGGTT CCAGAGTGGTAAGAAAGGGAATCCCCCTCTAATCATTATGTATACTGTGGTCAGAATGTG CGCTATATATTGTAACATCAAAGAAAGCACCTCCAGGCCTGAGGGTGTTACTGCTAATGC GTTTGGTTTACTTGTTGTCCTTGTAATATGCATACACATTTAGAACTCATGCAGCCATTT TGTGTGC