Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d045089_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:9:12194663:12197108:1 gene:Zm00001d045089 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pentatricopeptide repeat protein2263 description: pentatricopeptide repeat protein2263
Sequence	ATGTCTCCTTCCCGCCTCGTCCTCCCTCCGCCCGCCGGCGACCCAGGCGGCGGACTGCGG CGCTCTTACCTCCGCCTTGTCGCCCTATCATCCACGCCCCGCCACCTTGACCAGCTCCTC GCAGTCTCGCTCGCCTCCGGCCACTACGCGCTCGACCCGGCCCCGGCCACCGCGCTGCTG CTCCGCTACGCCTCCCTCCGTGCGCCGCCCAGCCACCTTCTCCGCCTCTTCCGCGCCTTC CCCTGCCCCGACCGGTTCCTCCGAAATGCGCTGCTACGCTCCCTCCCGTCCCTCCGCCCG CACCTCCTCTTCCCGTCGCCGGACTCGTTCTCCTTCGCCTTCGCCGCCACCTCGCTCTCC TCTTCCTGTTCCTCCCGTGGCAACGACGCTGCTGCCGCACGCACGCTTCACGGGCTCTCC GTGGCCGCGGGGTACGCGGCGGACACGTTCGTAGCGTCAGCTCTGGCCAAGCTCTACTTC AAGCTGTCAAGAGGGGACGACGCACGCAAGGTGTTCGACACGGTGCCGTCGCCCGACACT ATCTTGTGGAACACGCTGCTCGCTGGTTTGCCTGGATCGGAGGCCCTGGAGGCGTTCGTG CGGATGGTGGATGCTGGGAGAGTGCGACCTGACTCAACCACCCTTGCATCCAGCCTACGG GCAGCGGCAGAAGCATCACATATGGCAATGGGGAGGTGCGTCCATGGATATGGCGTGAAG TGCGGGTTGGCAGAGCATGAGCATGTTGTGACTGGGCTCATGTCGCTCTATTCAAAGTGC GGGGACATGGACTCTGCACAGTTTCTCTTTGATAGGATGGACAATCCAGATTTGGTTGCC TACAATGCTTTGATCTCAGGCTACTCAGTCAATGGCATGGTTGAATCATCGGTGGAGTTG TTCAAAGAGTTGACGGCCTCAGGCTGGAGGCCAAACTCAAGCACGTTGGTTGCGGTGATA CCGGTGTACAGTCCATTTGGGCATGAGCTGCTTGCTCGGTGCTTACATGCGTTTGTTGTC AAGGCCAGGTTAGATGCAGATGCTCTGGTGTCAACAGCACTGACCACTTTGTACTGTAGA TTAAACGATATGGAGTCTGCAAGGAGCATATTTGATGCAATGCTAGAGAAGACCATGGAA TCATGGAATGCAATGATATCCGGGTATGCCCAGAACGGCTTGACGGAGATGGCAGTTGCA CTTTTCCAGCTAATGCAGGAGCTCAATGTGCAGCCGAACCCCATCACTATTTCAAGCACT CTTTCAGCCTGTGCACATCTTGGAGCTTTGTCTCTGGGGAAGTGGGTTCACAGGATCATC TCCAAGGAGAAACTTGAGCTCAATGTCTACGTCATGACAGCGCTCATTGACATGTATGCG AAATGTGGAAGCATTGCTGAAGCTCGGAGCATCTTTGACAGAATGGATAACAAGAATGTA GTCTCCTGGAATGCGATGATATCTGGATACGGTCTCCATGGCCAAGGTGCTGAAGCTTTG AAGCTCTACAAGGATATGTTGGATGCACGCATTCTTCCAACAAGCTCCACCTTCCTGTCG GTGATCTACGCATGCAGCCATGGAGGATTGGTTGACGAAGGGCAGAAAGTTTTCCGCGTA ATGACTAATGAGTACAGGATCACCCCAGGTATCGAGCATTGCACATGTATGGTAGACCTT CTTGGTCGGGCAGGCAAACTGAATGAAGCTTTGGAGCTCATATCTGAATTCCCTCAAAGT GCCATTGGACCTGGCGTGTGGGGAGCGCTGCTAGGTGCTTGCATGGTCCATAAAAATAGT GACCTAGCAAAATTGGCATCCCAGAAGTTGTTCGAACTAGACTCAGAGAATGCGGGCTAC TACGTGCTCCTATCTAATCTGTACACATCCAAGAAGCATTACTCTGAAGCAGCTGTGGTG AGACAAGAGGCCAAGACCAGGAAGCTGGTGAAAACACCAGGGTGTACTCTCATCGAGATA GGCGACAGGCCTCATGTATTCATGGCTGGTGACCATCTTCACCCACAATCAGAGGCTATC TACTCATACTTAGAGAGGTTAACCGCAAAGATGATTGAAGCTGGGTACCAGCCTGTGACA GAGGCTGCATTGTACGATGTTGAGGAGGAAGAGAAGGAGCACATGGTAAAGGTGCACAGC GAGAAGTTGGCCATCGCCTTTGGGCTCCTTAGTACAGAGCCGGGGACAGAGATCAGGATC ATCAAGAACCTTAGGGTTTGCCTGGACTGCCATAACGCTACCAAGTTCATATCCAAAGTG ACACAGAGGTTGATTGTAGTTAGGGATGCATCGAGATTTCACCATTTCAGAGACGGGGTT TGCTCCTGTGGTGATTACTGGTGA

Peptide Sequence

PEP ID	Zm00001d045089_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:9:12194663:12197108:1 gene:Zm00001d045089 transcript:Zm00001d045089_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pentatricopeptide repeat protein2263 description: pentatricopeptide repeat protein2263
Sequence	MSPSRLVLPPPAGDPGGGLRRSYLRLVALSSTPRHLDQLLAVSLASGHYALDPAPATALL LRYASLRAPPSHLLRLFRAFPCPDRFLRNALLRSLPSLRPHLLFPSPDSFSFAFAATSLS SSCSSRGNDAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDT ILWNTLLAGLPGSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVK CGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVEL FKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCR LNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISST LSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNV VSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRV MTNEYRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHKNS DLAKLASQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEI GDRPHVFMAGDHLHPQSEAIYSYLERLTAKMIEAGYQPVTEAALYDVEEEEKEHMVKVHS EKLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGV CSCGDYW

Transcript Sequence

Transcript ID	Zm00001d045089_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:12194663:12197108:1 gene:Zm00001d045089 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pentatricopeptide repeat protein2263 description: pentatricopeptide repeat protein2263
Sequence	ATGTCTCCTTCCCGCCTCGTCCTCCCTCCGCCCGCCGGCGACCCAGGCGGCGGACTGCGG CGCTCTTACCTCCGCCTTGTCGCCCTATCATCCACGCCCCGCCACCTTGACCAGCTCCTC GCAGTCTCGCTCGCCTCCGGCCACTACGCGCTCGACCCGGCCCCGGCCACCGCGCTGCTG CTCCGCTACGCCTCCCTCCGTGCGCCGCCCAGCCACCTTCTCCGCCTCTTCCGCGCCTTC CCCTGCCCCGACCGGTTCCTCCGAAATGCGCTGCTACGCTCCCTCCCGTCCCTCCGCCCG CACCTCCTCTTCCCGTCGCCGGACTCGTTCTCCTTCGCCTTCGCCGCCACCTCGCTCTCC TCTTCCTGTTCCTCCCGTGGCAACGACGCTGCTGCCGCACGCACGCTTCACGGGCTCTCC GTGGCCGCGGGGTACGCGGCGGACACGTTCGTAGCGTCAGCTCTGGCCAAGCTCTACTTC AAGCTGTCAAGAGGGGACGACGCACGCAAGGTGTTCGACACGGTGCCGTCGCCCGACACT ATCTTGTGGAACACGCTGCTCGCTGGTTTGCCTGGATCGGAGGCCCTGGAGGCGTTCGTG CGGATGGTGGATGCTGGGAGAGTGCGACCTGACTCAACCACCCTTGCATCCAGCCTACGG GCAGCGGCAGAAGCATCACATATGGCAATGGGGAGGTGCGTCCATGGATATGGCGTGAAG TGCGGGTTGGCAGAGCATGAGCATGTTGTGACTGGGCTCATGTCGCTCTATTCAAAGTGC GGGGACATGGACTCTGCACAGTTTCTCTTTGATAGGATGGACAATCCAGATTTGGTTGCC TACAATGCTTTGATCTCAGGCTACTCAGTCAATGGCATGGTTGAATCATCGGTGGAGTTG TTCAAAGAGTTGACGGCCTCAGGCTGGAGGCCAAACTCAAGCACGTTGGTTGCGGTGATA CCGGTGTACAGTCCATTTGGGCATGAGCTGCTTGCTCGGTGCTTACATGCGTTTGTTGTC AAGGCCAGGTTAGATGCAGATGCTCTGGTGTCAACAGCACTGACCACTTTGTACTGTAGA TTAAACGATATGGAGTCTGCAAGGAGCATATTTGATGCAATGCTAGAGAAGACCATGGAA TCATGGAATGCAATGATATCCGGGTATGCCCAGAACGGCTTGACGGAGATGGCAGTTGCA CTTTTCCAGCTAATGCAGGAGCTCAATGTGCAGCCGAACCCCATCACTATTTCAAGCACT CTTTCAGCCTGTGCACATCTTGGAGCTTTGTCTCTGGGGAAGTGGGTTCACAGGATCATC TCCAAGGAGAAACTTGAGCTCAATGTCTACGTCATGACAGCGCTCATTGACATGTATGCG AAATGTGGAAGCATTGCTGAAGCTCGGAGCATCTTTGACAGAATGGATAACAAGAATGTA GTCTCCTGGAATGCGATGATATCTGGATACGGTCTCCATGGCCAAGGTGCTGAAGCTTTG AAGCTCTACAAGGATATGTTGGATGCACGCATTCTTCCAACAAGCTCCACCTTCCTGTCG GTGATCTACGCATGCAGCCATGGAGGATTGGTTGACGAAGGGCAGAAAGTTTTCCGCGTA ATGACTAATGAGTACAGGATCACCCCAGGTATCGAGCATTGCACATGTATGGTAGACCTT CTTGGTCGGGCAGGCAAACTGAATGAAGCTTTGGAGCTCATATCTGAATTCCCTCAAAGT GCCATTGGACCTGGCGTGTGGGGAGCGCTGCTAGGTGCTTGCATGGTCCATAAAAATAGT GACCTAGCAAAATTGGCATCCCAGAAGTTGTTCGAACTAGACTCAGAGAATGCGGGCTAC TACGTGCTCCTATCTAATCTGTACACATCCAAGAAGCATTACTCTGAAGCAGCTGTGGTG AGACAAGAGGCCAAGACCAGGAAGCTGGTGAAAACACCAGGGTGTACTCTCATCGAGATA GGCGACAGGCCTCATGTATTCATGGCTGGTGACCATCTTCACCCACAATCAGAGGCTATC TACTCATACTTAGAGAGGTTAACCGCAAAGATGATTGAAGCTGGGTACCAGCCTGTGACA GAGGCTGCATTGTACGATGTTGAGGAGGAAGAGAAGGAGCACATGGTAAAGGTGCACAGC GAGAAGTTGGCCATCGCCTTTGGGCTCCTTAGTACAGAGCCGGGGACAGAGATCAGGATC ATCAAGAACCTTAGGGTTTGCCTGGACTGCCATAACGCTACCAAGTTCATATCCAAAGTG ACACAGAGGTTGATTGTAGTTAGGGATGCATCGAGATTTCACCATTTCAGAGACGGGGTT TGCTCCTGTGGTGATTACTGGTGATTCACAACAGATAGCTTGAAAACTTTGAACTTTAAA AAACTAATTGTCCAGAAGCACTTCTCATTGTGCTCAAGTGTTGAAG