Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d045065_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:9:11355535:11361526:-1 gene:Zm00001d045065 gene_biotype:protein_coding transcript_biotype:protein_coding description:zinc ion binding
Sequence

ATGGAGGTGGGTGACCTGCACAAGGTGTGGGAGGTCCGTGCGCTCAAGATCAAGCCCGAC
GCGACCGCCGCGCGGGCAACCCTCGACCGCGTTGCCAGGCAGGTCCAGCCCATCATGCGC
CGCCACAAATGGCGCGTCAAGGTCCTCTCCGAGTTTTCGCCGCGGAACCCGAGGCTGCTG
GGGCTCAATGTCGGCGCGGGCGTCGAAGTCAAGCTGCGGCTACGGCGCGCCGGCCGCGAC
CATGACTTCATCCCGTACGAGGAGGTGCTCGATACCATGCTACACGAGCTCTGCCACAAC
GAGCGCGGGCCCCACGATGCGCAGTTTTACAAGCTCTGGGACGAGCTCCGCAAGGAATGC
GAAGAACTTGTTTCAAAGGGTATCACTGGAACAGGACAAGGGTTTGATGGCACGGGAAGG
CGAGTTGGTGGATTTACTGTACATCCACCACCACCATCTCTGCGGCAAGCTACGTTAGCT
GCTGCACAGAAGCGGGCAAGGAATGGAGCTCTATTGCCTTCTGGACCAAGAAAGTTGGGT
GGAAACAGTGAAATTATGAGTGCACTTAGTCCAGTACAAGCTGCTGCAATGGCGGCTGAA
AGAAGAATGTATGATGATTTGTGGTGTGGATCACATGATCAATCTGCTATTGATGATTCG
GATGATGTTATTATTCTTCAAGAGTCGCCAAATTTGACAAGGGATGAAAAAGACAAGGGT
AGCTGCTCCAACACTTCTGCACAGCCCAGCACTTCTTCTAGAATTCACATAGCAGCACGA
GATGATAGGACAACAAGTGATGCACTTGATAGTTCAAAGTGGGAATGTGGTGCTTGCACA
CTTCTGAACCAGCCTCTGGCACCAATCTGTGAAGTTTGTGGTACAACAAAACCTAAAATT
GCAAAGGCGAAGTACACAACTTGGTCTTGTAAATTTTGTACTCTAGAGAACAGCACTAAA
CTTGACAAATGCTCAGCATGTGATCAATGGAGATACTCATATGGGCCACCTGTAGCCACA
TATGGCCCAAGCTATGATTGA

Peptide Sequence

PEP ID

Zm00001d045065_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:9:11355535:11361526:-1 gene:Zm00001d045065 transcript:Zm00001d045065_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:zinc ion binding
Sequence

MEVGDLHKVWEVRALKIKPDATAARATLDRVARQVQPIMRRHKWRVKVLSEFSPRNPRLL
GLNVGAGVEVKLRLRRAGRDHDFIPYEEVLDTMLHELCHNERGPHDAQFYKLWDELRKEC
EELVSKGITGTGQGFDGTGRRVGGFTVHPPPPSLRQATLAAAQKRARNGALLPSGPRKLG
GNSEIMSALSPVQAAAMAAERRMYDDLWCGSHDQSAIDDSDDVIILQESPNLTRDEKDKG
SCSNTSAQPSTSSRIHIAARDDRTTSDALDSSKWECGACTLLNQPLAPICEVCGTTKPKI
AKAKYTTWSCKFCTLENSTKLDKCSACDQWRYSYGPPVATYGPSYD

Transcript Sequence

Transcript ID

Zm00001d045065_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:11355535:11361526:-1 gene:Zm00001d045065 gene_biotype:protein_coding transcript_biotype:protein_coding description:zinc ion binding
Sequence

GTGCGGCCAGTCTGGCAGTCCCGCTGTCCTCCAAACGTCGCCTATCTTCCCGCGCCCGCT
CGTGTATCCGTCTCTAAGCCAACTCCAGCAACACCGTCACCGTGTGTGTTTAGACTGATA
CATTGTTTGTAGAGAGAATTTTGAAATAGAAAGTTTGATAAAGAGTGAAATAGAGAGTCG
CTGGAGATAATAGTCGCCCGCAACCCATTTGAAAATCACGCCGTGTTGGCGTGTAATCGG
CGATTCGGCGGCCGCCGGGCGGTGGCGATGGAGGTGGGTGACCTGCACAAGGTGTGGGAG
GTCCGTGCGCTCAAGATCAAGCCCGACGCGACCGCCGCGCGGGCAACCCTCGACCGCGTT
GCCAGGCAGGTCCAGCCCATCATGCGCCGCCACAAATGGCGCGTCAAGGTCCTCTCCGAG
TTTTCGCCGCGGAACCCGAGGCTGCTGGGGCTCAATGTCGGCGCGGGCGTCGAAGTCAAG
CTGCGGCTACGGCGCGCCGGCCGCGACCATGACTTCATCCCGTACGAGGAGGTGCTCGAT
ACCATGCTACACGAGCTCTGCCACAACGAGCGCGGGCCCCACGATGCGCAGTTTTACAAG
CTCTGGGACGAGCTCCGCAAGGAATGCGAAGAACTTGTTTCAAAGGGTATCACTGGAACA
GGACAAGGGTTTGATGGCACGGGAAGGCGAGTTGGTGGATTTACTGTACATCCACCACCA
CCATCTCTGCGGCAAGCTACGTTAGCTGCTGCACAGAAGCGGGCAAGGAATGGAGCTCTA
TTGCCTTCTGGACCAAGAAAGTTGGGTGGAAACAGTGAAATTATGAGTGCACTTAGTCCA
GTACAAGCTGCTGCAATGGCGGCTGAAAGAAGAATGTATGATGATTTGTGGTGTGGATCA
CATGATCAATCTGCTATTGATGATTCGGATGATGTTATTATTCTTCAAGAGTCGCCAAAT
TTGACAAGGGATGAAAAAGACAAGGGTAGCTGCTCCAACACTTCTGCACAGCCCAGCACT
TCTTCTAGAATTCACATAGCAGCACGAGATGATAGGACAACAAGTGATGCACTTGATAGT
TCAAAGTGGGAATGTGGTGCTTGCACACTTCTGAACCAGCCTCTGGCACCAATCTGTGAA
GTTTGTGGTACAACAAAACCTAAAATTGCAAAGGCGAAGTACACAACTTGGTCTTGTAAA
TTTTGTACTCTAGAGAACAGCACTAAACTTGACAAATGCTCAGCATGTGATCAATGGAGA
TACTCATATGGGCCACCTGTAGCCACATATGGCCCAAGCTATGATTGAGATAACAGTGAA
GGCCACAATAGCACAGACGACACTTCTGAGCAGGCATCTGCTGCATTGTCGATATAAGTT
GTGTTATCTGCAACAGTTCTTGCTCTATTACTACTCATGTCATATCAGGTTTCATAGGTC
TGGAAAAATCTGATACCTGTTAAACTGGTAGTACTATTTAAGCGACCCTCTTTTGTGGAC
GTTGCTTGGAGCAATCCACGGATTGGTAAAATGAAACAATCGTAGTCCATGTCTGTTAAC
GTTAGCCCCAAGCCCAGGGCATGCAGCATTGCAGCCTCTGAACTCGTGTTTCGTGTCTCG
CCGTCTCGGTGACAGGTAACAACTCGCACCTAGGGCACACCGGCGAATTGGTCTTTATCT
GTTCCGACGTCGTCGACTCATGTTGCCGTGGGGTGAGGAAATTTATTACGTCAATTAATG
TAAGGTTTATTAC