Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d045048_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:9:11038810:11041663:-1 gene:Zm00001d045048 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pectin methylesterase2 description: pectin methylesterase2
Sequence	ATGGCGGCCGTCACGTTCTCACCGCCGCTCCTCCTGGCCATCCTTCTCATCCTCACCACC GCCAGCACAACTCAATGCCACGGTCACAAGAGCCAGCGCCACCACACCGGCGGAACTAGA GTGGCCCAAAAGACCGCCGCGGCGGGAGCCAGCCCGCCGGCCGACACTGTCCACCACGCC ATCTGCCACACGACGCCGCATCCGGTCTCCTGCCTGTTGGCCGTGGCCTCGCACCTCGGC GCCGTCGCCGGCGCGAAGGCGGCCGAGGCGTCCGCTGTCTCTGTGCAGCTCCTCCCGCCG AACGTGCTGTCCGTCGCGCTGGCGTCCCTCAACGGGGCGGAGTCGGCGCTGTCCTCGCTC TCGCCGGCGCTCTCCGCCCTCTCCGCGCCGGCCGCCTCCCCGGCGGGCGCCTCGCTCCGC CGCGGCGCGGCGCAGGACTGCCAGGACCTCCACGCCGCCACGCTGTGGTCGCTGTCGCGC TCCGCCTCGCTGCTCGCGGCGCCCGGCGAGAGCCTCCCGGCCGTGCGCGCGCACCTCGCG GCCGCGCTCGCCAACAAGGCCACCTGCCTCGACGGGCTCGCCGGCGCGTCCGGCCCGCGG GTCGGCGGCCTCCTCGCGTCCCTCGACGACGCCTACGAGCACGTGTCCAACTCGCTCGCC CTCGTCGCCAGGCGCGGCGGCGGCGTGTCTGCTGCTGGCTTCGTGGACGTCGTGGCGAAG ACAATTCACAACCGGCGGCTGCTCCAGGACGACGACGACGACGACGGCAACGGAGGAGAC GACGACAACGACAACGGAGGAGACGACAACGATGGCGGGGCTGACAACGGTGGCAACACT GGGCAGCCGGCGGCGGCTACGGTGATCACTGTGGCGAAGGATGGGACGGGGAACTTCCGG ACCGTGGGGGAGGCGGTGGCTGCGGCGCCGAACAACAGCGAGGCGAGGACGGTGATCCGC GTGAAGGCCGGGACGTACGAGGAGAACGTGGAGGTTCTGCCGTACAAGAAAAACATCGCC CTGGTCGGCGAAGGGCGCGACACGACGGTCATCACCGGCAGCCGCAGCGCCGCCGACGGC TGGACCACCTTTCGCTCGGCCACTTTCGGCGTCTCCGGCGAGGGGTTCCTGGCGCGCGAC ATCACGTTCCGCAACACGGCGGGCGCGGGCAAGGGGCAGGCGGTGGCGCTGCGCGTGAAC GCGGACCTGGCCGCGCTGTACCGCTGCGGCGTGGAGGGGCACCAGGACGCGCTGTACGCG CACTCGTTCCGGCAGTTCTACCGCGAGTGCGCCGTGTCGGGCACCGTCGACGTGGTCTTC GGCGACGCGGCGGCCGTGCTGCAGGGCTGCGCGCTCCTGGCCAGGGCGCCCGTGCCCGGC CAGTCCGTCGTGCTCACGGCGCACGGCCGCGCCGACCCCAACGAGGACACGGGCATCGCG CTGCACCACTGCACCGTCTCCGCCTCCGCCGCCGACCCCGCGCCCGCCGGCACGCGCACG TTCCTGGGCCGGCCGTGGGGCGCGTACGCGCGCGCCGTCGTGATGGACTCCTACCTGGGC CAGATCGTGGACCGGGAGGGATGGGCCGAGTGGCCCGGCGCCGAGCCCGGCCGCGCGGAC ACCGTGTACTTCGGCGAGTACGGGAACGACGGGCCGGGGGCCGACACGGGAGGCCGCGTG GGCTGGGCTGGGGTGCGGCAGATGGAGTACGACGAGGCGGCACAGTTCGCCGTCGAGAAC TTCATCTACGGCGACGAGTGGCTCGGCGCCACCTCCTTCCCCTACGATGACGACGTCTGA

Peptide Sequence

PEP ID	Zm00001d045048_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:9:11038810:11041663:-1 gene:Zm00001d045048 transcript:Zm00001d045048_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pectin methylesterase2 description: pectin methylesterase2
Sequence	MAAVTFSPPLLLAILLILTTASTTQCHGHKSQRHHTGGTRVAQKTAAAGASPPADTVHHA ICHTTPHPVSCLLAVASHLGAVAGAKAAEASAVSVQLLPPNVLSVALASLNGAESALSSL SPALSALSAPAASPAGASLRRGAAQDCQDLHAATLWSLSRSASLLAAPGESLPAVRAHLA AALANKATCLDGLAGASGPRVGGLLASLDDAYEHVSNSLALVARRGGGVSAAGFVDVVAK TIHNRRLLQDDDDDDGNGGDDDNDNGGDDNDGGADNGGNTGQPAAATVITVAKDGTGNFR TVGEAVAAAPNNSEARTVIRVKAGTYEENVEVLPYKKNIALVGEGRDTTVITGSRSAADG WTTFRSATFGVSGEGFLARDITFRNTAGAGKGQAVALRVNADLAALYRCGVEGHQDALYA HSFRQFYRECAVSGTVDVVFGDAAAVLQGCALLARAPVPGQSVVLTAHGRADPNEDTGIA LHHCTVSASAADPAPAGTRTFLGRPWGAYARAVVMDSYLGQIVDREGWAEWPGAEPGRAD TVYFGEYGNDGPGADTGGRVGWAGVRQMEYDEAAQFAVENFIYGDEWLGATSFPYDDDV

Transcript Sequence

Transcript ID	Zm00001d045048_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:11038810:11041663:-1 gene:Zm00001d045048 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pectin methylesterase2 description: pectin methylesterase2
Sequence	CCACACACGCTAGCAAGCTCGCGCAGTTGCGCTTCCCACAACCATGGCGGCCGTCACGTT CTCACCGCCGCTCCTCCTGGCCATCCTTCTCATCCTCACCACCGCCAGCACAACTCAATG CCACGGTCACAAGAGCCAGCGCCACCACACCGGCGGAACTAGAGTGGCCCAAAAGACCGC CGCGGCGGGAGCCAGCCCGCCGGCCGACACTGTCCACCACGCCATCTGCCACACGACGCC GCATCCGGTCTCCTGCCTGTTGGCCGTGGCCTCGCACCTCGGCGCCGTCGCCGGCGCGAA GGCGGCCGAGGCGTCCGCTGTCTCTGTGCAGCTCCTCCCGCCGAACGTGCTGTCCGTCGC GCTGGCGTCCCTCAACGGGGCGGAGTCGGCGCTGTCCTCGCTCTCGCCGGCGCTCTCCGC CCTCTCCGCGCCGGCCGCCTCCCCGGCGGGCGCCTCGCTCCGCCGCGGCGCGGCGCAGGA CTGCCAGGACCTCCACGCCGCCACGCTGTGGTCGCTGTCGCGCTCCGCCTCGCTGCTCGC GGCGCCCGGCGAGAGCCTCCCGGCCGTGCGCGCGCACCTCGCGGCCGCGCTCGCCAACAA GGCCACCTGCCTCGACGGGCTCGCCGGCGCGTCCGGCCCGCGGGTCGGCGGCCTCCTCGC GTCCCTCGACGACGCCTACGAGCACGTGTCCAACTCGCTCGCCCTCGTCGCCAGGCGCGG CGGCGGCGTGTCTGCTGCTGGCTTCGTGGACGTCGTGGCGAAGACAATTCACAACCGGCG GCTGCTCCAGGACGACGACGACGACGACGGCAACGGAGGAGACGACGACAACGACAACGG AGGAGACGACAACGATGGCGGGGCTGACAACGGTGGCAACACTGGGCAGCCGGCGGCGGC TACGGTGATCACTGTGGCGAAGGATGGGACGGGGAACTTCCGGACCGTGGGGGAGGCGGT GGCTGCGGCGCCGAACAACAGCGAGGCGAGGACGGTGATCCGCGTGAAGGCCGGGACGTA CGAGGAGAACGTGGAGGTTCTGCCGTACAAGAAAAACATCGCCCTGGTCGGCGAAGGGCG CGACACGACGGTCATCACCGGCAGCCGCAGCGCCGCCGACGGCTGGACCACCTTTCGCTC GGCCACTTTCGGCGTCTCCGGCGAGGGGTTCCTGGCGCGCGACATCACGTTCCGCAACAC GGCGGGCGCGGGCAAGGGGCAGGCGGTGGCGCTGCGCGTGAACGCGGACCTGGCCGCGCT GTACCGCTGCGGCGTGGAGGGGCACCAGGACGCGCTGTACGCGCACTCGTTCCGGCAGTT CTACCGCGAGTGCGCCGTGTCGGGCACCGTCGACGTGGTCTTCGGCGACGCGGCGGCCGT GCTGCAGGGCTGCGCGCTCCTGGCCAGGGCGCCCGTGCCCGGCCAGTCCGTCGTGCTCAC GGCGCACGGCCGCGCCGACCCCAACGAGGACACGGGCATCGCGCTGCACCACTGCACCGT CTCCGCCTCCGCCGCCGACCCCGCGCCCGCCGGCACGCGCACGTTCCTGGGCCGGCCGTG GGGCGCGTACGCGCGCGCCGTCGTGATGGACTCCTACCTGGGCCAGATCGTGGACCGGGA GGGATGGGCCGAGTGGCCCGGCGCCGAGCCCGGCCGCGCGGACACCGTGTACTTCGGCGA GTACGGGAACGACGGGCCGGGGGCCGACACGGGAGGCCGCGTGGGCTGGGCTGGGGTGCG GCAGATGGAGTACGACGAGGCGGCACAGTTCGCCGTCGAGAACTTCATCTACGGCGACGA GTGGCTCGGCGCCACCTCCTTCCCCTACGATGACGACGTCTGATTCGGCGCAAACCTTGC TCTGCAAATCTCAAGAATACAAAGGCCGCACAAGTGACCGTGTAAAGCTATGCATACCCA TCATCAGCCGTCAGTGAGTTTGGCTTGTGTTTTAGTATATTCAAGTTGGAATTGTTAAGA GGGGTCTCACATCTCTATATAAGGAATCTGTACACCCCCTCATAATACAGAGATCAGAAA GAGGCCAGAGGCACAACCCTATATCATGTGTCTCGTGTGTTTCCTCTGTCGTGCTTATGT GAAGGG