Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d045042_T020
CDS Infomation	cds chromosome:B73_RefGen_v4:9:10909821:10912908:1 gene:Zm00001d045042 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:shrunken1 description:Sucrose synthase 1
Sequence	ATGATGTTCAACGTTGTTATCCTGTCTCCTCATGGCTACTTCGCCCAGTCCAATGTGCTT GGATACCCTGACACTGGCGGTCAGGTTGTGTACATTCTGGATCAGGTCCGTGCTTTGGAG AATGAGATGCTTCTGAGGATTAAGCAGCAAGGCCTTGATATCACTCCGAAGATCCTCATT GTTACCAGGCTGTTGCCTGATGCTGCTGGGACTACGTGCGGTCAGCGGCTGGAGAAGGTC ATTGGTACTGAGCACACAGACATCATTCGCGTTCCCTTCAGAAATGAGAATGGCATCCTC CGCAAGTGGATCTCTCGTTTTGATGTCTGGCCATACCTGGAGACATACACTGAGGATGTT TCCAGTGAAATAATGAAAGAAATGCAGGCCAAGCCTGACCTTATCATTGGCAACTACAGC GATGGCAACCTAGTCGCCACTCTGCTCGCGCACAAGTTGGGAGTCACTCAGTGTACCATC GCTCATGCCTTGGAGAAAACCAAATACCCCAACTCGGACATATACTTGGACAAATTCGAC AGCCAGTACCACTTCTCTTGCCAGTTCACAGCTGACCTTATTGCCATGAACCACACCGAT TTCATCATCACCAGCACATTCCAAGAAATCGCGGGAAGCAAGGACACCGTGGGGCAGTAC GAGTCCCACATCGCGTTCACTCTTCCTGGGCTCTACCGTGTCGTCCATGGCATCGATGTT TTCGATCCCAAGTTCAACATTGTCTCCCCTGGAGCAGACATGAGTGTTTACTACCCGTAT ACGGAAACCGACAAGAGACTCACTGCCTTCCATCCTGAAATCGAGGAGCTCATCTACAGC GACGTCGAGAACTCCGAGCACAAGTTCGTGCTGAAGGACAAGAAGAAGCCGATCATCTTC TCGATGGCGCGTCTCGACCGCGTGAAGAACATGACAGGCCTGGTCGAGATGTACGGCAAG AACGCGCGCCTGAGGGAGCTGGCGAACCTCGTGATCGTTGCCGGTGACCACGGCAAGGAG TCCAAGGACAGGGAGGAGCAGGCGGAGTTCAAGAAGATGTACAGCCTCATCGACGAGTAC AAGTTGAAGGGCCATATCCGGTGGATCTCGGCGCAGATGAACCGCGTCCGCAACGGGGAG CTGTACCGCTACATTTGCGATACGAAGGGCGCATTCGTGCAGCCTGCGTTCTACGAAGCG TTCGGCCTGACTGTGATCGAGTCCATGACGTGCGGTCTGCCAACGATCGCGACCTGCCAT GGTGGCCCTGCTGAGATCATCGTGGACGGGGTATCTGGCCTGCACATTGACCCTTACCAC AGCGACAAGGCCGCGGATATCCTGGTCAACTTCTTTGACAAATGCAAGGCAGATCCGAGC TACTGGGACAAGATCTCACAGGGCGGCCTGCAGAGAATCTATGAGAAGTACACCTGGAAG CTCTACTCCGAGAGGCTGATGACCCTGACCGGCGTGTACGGGTTCTGGAAGTACGTGAGC AACCTGGAGAGGCGCGAGACCCGCCGCTACATCGAGATGTTCTACGCCCTGAAGTACCGT AGCCTGGCAAGCCAGGTTCCGCTGTCCTTCGATTAG

Peptide Sequence

PEP ID	Zm00001d045042_P020
PEP Infomation	pep chromosome:B73_RefGen_v4:9:10909821:10912908:1 gene:Zm00001d045042 transcript:Zm00001d045042_T020 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:shrunken1 description:Sucrose synthase 1
Sequence	MMFNVVILSPHGYFAQSNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPKILI VTRLLPDAAGTTCGQRLEKVIGTEHTDIIRVPFRNENGILRKWISRFDVWPYLETYTEDV SSEIMKEMQAKPDLIIGNYSDGNLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFD SQYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHIAFTLPGLYRVVHGIDV FDPKFNIVSPGADMSVYYPYTETDKRLTAFHPEIEELIYSDVENSEHKFVLKDKKKPIIF SMARLDRVKNMTGLVEMYGKNARLRELANLVIVAGDHGKESKDREEQAEFKKMYSLIDEY KLKGHIRWISAQMNRVRNGELYRYICDTKGAFVQPAFYEAFGLTVIESMTCGLPTIATCH GGPAEIIVDGVSGLHIDPYHSDKAADILVNFFDKCKADPSYWDKISQGGLQRIYEKYTWK LYSERLMTLTGVYGFWKYVSNLERRETRRYIEMFYALKYRSLASQVPLSFD

Transcript Sequence

Transcript ID	Zm00001d045042_T020
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:10909821:10912908:1 gene:Zm00001d045042 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:shrunken1 description:Sucrose synthase 1
Sequence	GGTTCCAAGAGCTTGGCTTGGAGAAGGGTTGGGGTGACACTGCGAAGCGTGTACTCGACA CACTCCACTTGCTTCTCGACCTTCTGGAGGCCCCTGATCCTGCCAACTTGGAGAAGTTCC TTGGAACTATACCAATGATGTTCAACGTTGTTATCCTGTCTCCTCATGGCTACTTCGCCC AGTCCAATGTGCTTGGATACCCTGACACTGGCGGTCAGGTTGTGTACATTCTGGATCAGG TCCGTGCTTTGGAGAATGAGATGCTTCTGAGGATTAAGCAGCAAGGCCTTGATATCACTC CGAAGATCCTCATTGTTACCAGGCTGTTGCCTGATGCTGCTGGGACTACGTGCGGTCAGC GGCTGGAGAAGGTCATTGGTACTGAGCACACAGACATCATTCGCGTTCCCTTCAGAAATG AGAATGGCATCCTCCGCAAGTGGATCTCTCGTTTTGATGTCTGGCCATACCTGGAGACAT ACACTGAGGATGTTTCCAGTGAAATAATGAAAGAAATGCAGGCCAAGCCTGACCTTATCA TTGGCAACTACAGCGATGGCAACCTAGTCGCCACTCTGCTCGCGCACAAGTTGGGAGTCA CTCAGTGTACCATCGCTCATGCCTTGGAGAAAACCAAATACCCCAACTCGGACATATACT TGGACAAATTCGACAGCCAGTACCACTTCTCTTGCCAGTTCACAGCTGACCTTATTGCCA TGAACCACACCGATTTCATCATCACCAGCACATTCCAAGAAATCGCGGGAAGCAAGGACA CCGTGGGGCAGTACGAGTCCCACATCGCGTTCACTCTTCCTGGGCTCTACCGTGTCGTCC ATGGCATCGATGTTTTCGATCCCAAGTTCAACATTGTCTCCCCTGGAGCAGACATGAGTG TTTACTACCCGTATACGGAAACCGACAAGAGACTCACTGCCTTCCATCCTGAAATCGAGG AGCTCATCTACAGCGACGTCGAGAACTCCGAGCACAAGTTCGTGCTGAAGGACAAGAAGA AGCCGATCATCTTCTCGATGGCGCGTCTCGACCGCGTGAAGAACATGACAGGCCTGGTCG AGATGTACGGCAAGAACGCGCGCCTGAGGGAGCTGGCGAACCTCGTGATCGTTGCCGGTG ACCACGGCAAGGAGTCCAAGGACAGGGAGGAGCAGGCGGAGTTCAAGAAGATGTACAGCC TCATCGACGAGTACAAGTTGAAGGGCCATATCCGGTGGATCTCGGCGCAGATGAACCGCG TCCGCAACGGGGAGCTGTACCGCTACATTTGCGATACGAAGGGCGCATTCGTGCAGCCTG CGTTCTACGAAGCGTTCGGCCTGACTGTGATCGAGTCCATGACGTGCGGTCTGCCAACGA TCGCGACCTGCCATGGTGGCCCTGCTGAGATCATCGTGGACGGGGTATCTGGCCTGCACA TTGACCCTTACCACAGCGACAAGGCCGCGGATATCCTGGTCAACTTCTTTGACAAATGCA AGGCAGATCCGAGCTACTGGGACAAGATCTCACAGGGCGGCCTGCAGAGAATCTATGAGA AGTACACCTGGAAGCTCTACTCCGAGAGGCTGATGACCCTGACCGGCGTGTACGGGTTCT GGAAGTACGTGAGCAACCTGGAGAGGCGCGAGACCCGCCGCTACATCGAGATGTTCTACG CCCTGAAGTACCGTAGCCTGGCAAGCCAGGTTCCGCTGTCCTTCGATTAGTACGGGGAAA GAAGAAGAAGAAGAAGCCCAGGCCGGAGAACCATCGCCTGCATTTCGATCTGTTTCACCG CAATTCGCATTGTTAGTCGTGTATTGGAGTTATGTGTACTTGGTTTCCAAGAACTTTGGT TCCTTCTCGTTTTTTTTCCTTGTTTGAGCGTTTTTGGGCAGCGCTGGCCTGGTTCCTAGT ATGGTGGGAATTGGCTGCACCTTTTGCTTCGAATAAAAATGCCTGCTCGTTC