Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d045027_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:10607821:10611813:1 gene:Zm00001d045027 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-oxoacyl-[acyl-carrier-protein] synthase I chloroplastic
Sequence

ATGCAGAGCCTCCTCGTGCCCACTGCTGCATCGGCCCCGGTGGCGGCTCCGCGGGCTCGG
CGGAATCTCCCTATGCGCCTCTCCGTCCGCGCCTCCGCGACGGCGGCAGCGGCACCGCGG
CGGGAGACGGATCCCAAGAAGCGGGTGGTGATCACGGGGATGGGGTTGGTCTCCGTGTTC
GGGAACGACGTAGACGCTTACTACGACCGCCTGCTAGCCGGGGAGAGCGGCATCGGGCCC
ATCGACCGCTTCGACGCCTCTAAGTTCCCCACCCGCTTCGCCGGCCAGATCCGGGGCTTC
TCGTCCGAGGGCTACATCGACGGAAAGAACGACCGCCGCCTCGACGACTGCCTCCGATAC
TGCATCGTCAGTGGCAAGAAGGCTCTCGAGGCTGCCGGTATTGCCCACGGCTCCAAGCCC
ATGGAAAAGATTGACAAAACCCGGGCTGGTGTGCTTGTGGGCACTGGTATGGGTGGCCTC
ACGGTGTTTTCTGATGGTGTTCAGAATCTCATTGAGAAGGGCTACAGAAAAATAACTCCT
TTCTTCATCCCATATGCTATAACAAACATGGGTTCTGCCCTGCTTGGAATGGATATTGGT
TTCATGGGTCCAAACTACTCCATCTCAACTGCCTGTGCTACCTCGAACTACTGTTTCTAT
GCTGCAGCAAACCATATCCGTAGAGGCGAAGCGGATATAATGATAGCTGGAGGCACTGAA
GCTGCAATTATTCCAATTGGTGTTGGTGGCTTTGTTGCATGTAGAGCACTGTCACAGAGG
AATGATGACCCTAAAACAGCATCCAGGCCTTGGGACAAGGATCGTGATGGTTTTGTCATG
GGTGAAGGAGCTGGAGTCCTGGTCATGGAGAGCCTAGAGCATGCAATTAAACGTGATGCA
CCAATAATTGCGGAGTATTTAGGAGGTGCTGTGAACTGTGATGCTTACCATATGACTGAC
CCGAGATCTGATGGTCTTGGTGTTTCATCTTGCATCAAGCAAAGTCTCGAAGATGCTGGT
GTGGCTCCTGAGGAGGTCAACTATATTAATGCTCATGCAACATCAACCCTTGCTGGTGAT
CTGGCAGAGGTGAATGCCATCAAGCAAGTCTTCAAGGACCCATCTGGGATCAAAATAAAT
GCAACCAAGTCCATGATAGGACATTGCCTTGGTGCAGCAGGTGGTTTGGAAGCCATTGCT
ACTGTCAAAGCGATAACTACTGGATGGGTGCATCCAAGCATAAACCAATTTAACCCAGAG
GAAGCGGTTGAATTCGACACAGTACCTAATGTAAAAAAGCAGCATGAAGTGAACGTTGGT
GGGTATCAATTTCAAGGCACCTTAATTCCCCCCAAACAAGACTTCTTTCTCCCACTTATA
TTTCTTTGTATTGCCATGCAGGCATCTCAAATTCTTTTGGATTTGGAGGTCACAATTCTG
TCGTAG

Peptide Sequence

PEP ID

Zm00001d045027_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:10607821:10611813:1 gene:Zm00001d045027 transcript:Zm00001d045027_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-oxoacyl-[acyl-carrier-protein] synthase I chloroplastic
Sequence

MQSLLVPTAASAPVAAPRARRNLPMRLSVRASATAAAAPRRETDPKKRVVITGMGLVSVF
GNDVDAYYDRLLAGESGIGPIDRFDASKFPTRFAGQIRGFSSEGYIDGKNDRRLDDCLRY
CIVSGKKALEAAGIAHGSKPMEKIDKTRAGVLVGTGMGGLTVFSDGVQNLIEKGYRKITP
FFIPYAITNMGSALLGMDIGFMGPNYSISTACATSNYCFYAAANHIRRGEADIMIAGGTE
AAIIPIGVGGFVACRALSQRNDDPKTASRPWDKDRDGFVMGEGAGVLVMESLEHAIKRDA
PIIAEYLGGAVNCDAYHMTDPRSDGLGVSSCIKQSLEDAGVAPEEVNYINAHATSTLAGD
LAEVNAIKQVFKDPSGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWVHPSINQFNPE
EAVEFDTVPNVKKQHEVNVGGYQFQGTLIPPKQDFFLPLIFLCIAMQASQILLDLEVTIL
S

Transcript Sequence

Transcript ID

Zm00001d045027_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:10607821:10611813:1 gene:Zm00001d045027 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-oxoacyl-[acyl-carrier-protein] synthase I chloroplastic
Sequence

AAGAAGTCCGCCTTGCGAAGTCCGCCCTGTTGCGTTGAGAAAGAGAAGAGGTGAGCCTGT
TGCAGTGTTGCCCGTCTCCGGCGCCTCCAAAGTCCCACGACCCCAAAACTCTGTGGGCCC
GCGAACCCATTCTCCATATACACAGGGGTAACGCTCCGCCTCGCAGCCAGCAGGACACCA
CTCATCTTCCTTCCCCCCCGCCTCGTTTCCATCGCCGCCACTCTCTTGCTCCCCCGTACC
ATCCCTCGCCACCGCCACCGCCGTCGCTATGCAGAGCCTCCTCGTGCCCACTGCTGCATC
GGCCCCGGTGGCGGCTCCGCGGGCTCGGCGGAATCTCCCTATGCGCCTCTCCGTCCGCGC
CTCCGCGACGGCGGCAGCGGCACCGCGGCGGGAGACGGATCCCAAGAAGCGGGTGGTGAT
CACGGGGATGGGGTTGGTCTCCGTGTTCGGGAACGACGTAGACGCTTACTACGACCGCCT
GCTAGCCGGGGAGAGCGGCATCGGGCCCATCGACCGCTTCGACGCCTCTAAGTTCCCCAC
CCGCTTCGCCGGCCAGATCCGGGGCTTCTCGTCCGAGGGCTACATCGACGGAAAGAACGA
CCGCCGCCTCGACGACTGCCTCCGATACTGCATCGTCAGTGGCAAGAAGGCTCTCGAGGC
TGCCGGTATTGCCCACGGCTCCAAGCCCATGGAAAAGATTGACAAAACCCGGGCTGGTGT
GCTTGTGGGCACTGGTATGGGTGGCCTCACGGTGTTTTCTGATGGTGTTCAGAATCTCAT
TGAGAAGGGCTACAGAAAAATAACTCCTTTCTTCATCCCATATGCTATAACAAACATGGG
TTCTGCCCTGCTTGGAATGGATATTGGTTTCATGGGTCCAAACTACTCCATCTCAACTGC
CTGTGCTACCTCGAACTACTGTTTCTATGCTGCAGCAAACCATATCCGTAGAGGCGAAGC
GGATATAATGATAGCTGGAGGCACTGAAGCTGCAATTATTCCAATTGGTGTTGGTGGCTT
TGTTGCATGTAGAGCACTGTCACAGAGGAATGATGACCCTAAAACAGCATCCAGGCCTTG
GGACAAGGATCGTGATGGTTTTGTCATGGGTGAAGGAGCTGGAGTCCTGGTCATGGAGAG
CCTAGAGCATGCAATTAAACGTGATGCACCAATAATTGCGGAGTATTTAGGAGGTGCTGT
GAACTGTGATGCTTACCATATGACTGACCCGAGATCTGATGGTCTTGGTGTTTCATCTTG
CATCAAGCAAAGTCTCGAAGATGCTGGTGTGGCTCCTGAGGAGGTCAACTATATTAATGC
TCATGCAACATCAACCCTTGCTGGTGATCTGGCAGAGGTGAATGCCATCAAGCAAGTCTT
CAAGGACCCATCTGGGATCAAAATAAATGCAACCAAGTCCATGATAGGACATTGCCTTGG
TGCAGCAGGTGGTTTGGAAGCCATTGCTACTGTCAAAGCGATAACTACTGGATGGGTGCA
TCCAAGCATAAACCAATTTAACCCAGAGGAAGCGGTTGAATTCGACACAGTACCTAATGT
AAAAAAGCAGCATGAAGTGAACGTTGGTGGGTATCAATTTCAAGGCACCTTAATTCCCCC
CAAACAAGACTTCTTTCTCCCACTTATATTTCTTTGTATTGCCATGCAGGCATCTCAAAT
TCTTTTGGATTTGGAGGTCACAATTCTGTCGTAGTATTTGCGCCATTTAAGCCATAAGGT
GTTCCTGGCCTCACAAACCTTGGTCAGAACAACGAGGATCTTTAGGAGTTTCTGCGTTCA
ATTTTCATGTGTTCTCTTTAGG