Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d045026_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:9:10505521:10516156:-1 gene:Zm00001d045026 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARF-transcription factor 27 description:Auxin response factor 7
Sequence

ATGCAACCACCAGCCCAAGAACTCATTGCCAAGGATCTGCATGATATTTCATGGAAATTT
CGACATATCTATCGAGGTCAACCGAAGAGGCATCTTTTGACAACTGGTTGGAGTGTCTTC
GTCAGTACAAAAAGGCTGTTAGCCGGTGATTCAGTTCTCTTTATAAGGGACGAGAAATCT
CAACTTCTCTTAGGTATAAGGCGTGCTAGCAGACCCCAACCAGCTCTGTCATCATCAGTT
TTATCAAGTGACAGCATGCACATTGGAATCCTTGCAGCAGCAGCCCATGCTGCCGCAAAT
AGTAGCCCATTTACTATTTTCTATAACCCAAGGGCAAGCCCATCAGAATTTGTCATCCCT
TTAGCAAAATACAATAAGGCTTTGTATACACAAGTGTCCCTTGGAATGCGATTCAGAATG
CTCTTTGAGACAGAGGATTCAGGGGTAAGAAGATACATGGGCACGATCACAGGCATTGGC
GACTTAGATCCACTGCGATGGAAGAATTCTCATTGGCGAAACCTTCAGGTTGGTTGGGAT
GAATCGACTGCATCTGAGAGGCGCACCCGTGTTTCGATATGGGAGATTGAACCAGTTGCT
ACACCATTTTATATATGCCCACCACCATTTTTCAGGCCAAAGCTTCCTAAGCAAGCAGGA
ATGCCAGATGATGAAAACGAGGTTGAGAGTGCTTTCAAAAGAGCGATGCCATGGCTTGCT
GATGACTTCGCTCTGAAAGATGTCCAAAATGCATTATTTCCAGGCCTGAGCCTAGTTCAA
TGGATGGCTATGCAGCAAAATCCTCAGATGCTAGCAACTGCTTCCCCTGCTGTACAGTCG
CAGTACTTGACCTCTAATGCACTGGGTATGCAGGATGGGATAGGCAGTGTCAGTGAAGAT
CCAACAAAAAGATTGACTATGCAGGCCCAAAATATTGGCTTACCTAATTTACAGGCTGGT
TCGAAAGTGGACCACCCTGCAATTACCCCATTAGCTCAACACCAGCAACAGCCTCACCAT
GTATTGCAACAACAGCAGGTCCAACCACTGCAGCAAAGTTCTGCGATCCTACAGCAACAG
CAAGCCCAGTTGTTGCAGCAAAATGCCATTCACTTGCAGCAGCAGCAAGAACAACTCCAA
CGGCAACAATCACAGCCGCAGCAACAGTTCAAAGCTACTGCATGTCTTCAGTCATCGGAT
CAGCACAAGCTGAAAGAGCAACAGCCTTCAGGTGGACAAGCTGCCTCACAAGTACATTTG
TTAAACCAGATTTTGCAACCATCTTCATCTCAGCTACAACAGCTGGGTTTACCCAAGTCA
CCTACTCAGCGCCCAGGGTTACCAAGTCTAACAACAATGGGTTCTTTGCAGCAGTCACAA
TTACCTCAGACTCCACAGCCGCAACAAACAGCAGAATACCACCAGGCACTCCTACAAAGT
CAACAACCCCAACTACAACAGCTATCACAATCAGAACTGCAGCTGCAGCTGCTTCAAAAG
ATTCAACAACAAAATCTGCTATCTCAACTGAACCCACAGCATCAGTCCCAGCTGATCCAA
CAATTGTCTCAGAAAAGCCAGGAAATTCTCCAGCAACAAGTTCTTCAACATCAGTTTGGT
GGTGCTGATGCCATGGGTCAGCTCAAACATTTACAGCAAACACCTTTGAACCATAATACA
GGATCCTTGCCACCCCAGCAACTTGTAAGATCACACTCAGCACTCACTGAGAGCGAAGAA
CCTTCCAGCTCAACAGTTCCATCTGGCAGCCGTATCTCCCCAATAAATTCATTTAGTAGA
GCAAACCAAGGAACCAGAAATTTGCCTGAGATGCCAGCAACACCGCACATTGAGCACTTA
CTTCAGGAAATTCAAAGTAAGACAGATAATCGAATCAAGAATGATATACAAGGTAGTAAG
GAAACGGTCCATGCACCTAATCGTCATCTAGCTTCAGATCAACTTGATGCGTCATCTGCT
ACCTCCTTTTGCTTAGATGAGAGCCCACGAGAAGGCTTTTCCTTTCCTCCAGTTTGTTTG
GATAACAATGTTCAAGTTGATCCAAGAGAGAATTTTCTTATTGCGGAAAATGTGGACACA
TTAATGCCTGACGCCCTGTTGTCAAGAGGGATGTCGTCTGGAAAGGGTATATGCAATCTA
CCTTCTGGACAAAGGGATCATAGGGATGTGGAAAACGAGCTATCCTCTGCTGCATTCAGC
TCCCAGTCATTTGGTGTGCCGGACATGTCTTTTAAGCCTGGATGTTCAAGTGATGTTGCT
GTTGCTGATGGTGGAATGGCAAGCCAAGGACTGTGGAATAGTCAAACACAGCGGATGAGA
ACCTTCACCAAGGTTCAAAAGCGTGGATCCGTTGGGAGATCAATTGATATAACACGGTAC
CGAGGTTACGAAGATCTTCGGCATGATCTTGCATGCATGTTCGGTATTCAAGGGCAGCTT
GAAGATCCCTACAGGACGGACTGGAAGCTGGTCTATGTTGACCACGAAAATGACATCCTC
CTTGTTGGCGACGACCCATGGGAGGAGTTTGTAAGCTGTGTCAAGAGCATTAAAATATTG
TCATCTGTTGAAGTACAGCAAATGAGCTTGGATGGTGACCTTGGCTGCATCCCTCAAACT
CAAGCCTGTAGTGCTTCTGATGACGCAAATGCATGGAGGGCCTGA

Peptide Sequence

PEP ID

Zm00001d045026_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:9:10505521:10516156:-1 gene:Zm00001d045026 transcript:Zm00001d045026_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARF-transcription factor 27 description:Auxin response factor 7
Sequence

MQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFIRDEKS
QLLLGIRRASRPQPALSSSVLSSDSMHIGILAAAAHAAANSSPFTIFYNPRASPSEFVIP
LAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIGDLDPLRWKNSHWRNLQVGWD
ESTASERRTRVSIWEIEPVATPFYICPPPFFRPKLPKQAGMPDDENEVESAFKRAMPWLA
DDFALKDVQNALFPGLSLVQWMAMQQNPQMLATASPAVQSQYLTSNALGMQDGIGSVSED
PTKRLTMQAQNIGLPNLQAGSKVDHPAITPLAQHQQQPHHVLQQQQVQPLQQSSAILQQQ
QAQLLQQNAIHLQQQQEQLQRQQSQPQQQFKATACLQSSDQHKLKEQQPSGGQAASQVHL
LNQILQPSSSQLQQLGLPKSPTQRPGLPSLTTMGSLQQSQLPQTPQPQQTAEYHQALLQS
QQPQLQQLSQSELQLQLLQKIQQQNLLSQLNPQHQSQLIQQLSQKSQEILQQQVLQHQFG
GADAMGQLKHLQQTPLNHNTGSLPPQQLVRSHSALTESEEPSSSTVPSGSRISPINSFSR
ANQGTRNLPEMPATPHIEHLLQEIQSKTDNRIKNDIQGSKETVHAPNRHLASDQLDASSA
TSFCLDESPREGFSFPPVCLDNNVQVDPRENFLIAENVDTLMPDALLSRGMSSGKGICNL
PSGQRDHRDVENELSSAAFSSQSFGVPDMSFKPGCSSDVAVADGGMASQGLWNSQTQRMR
TFTKVQKRGSVGRSIDITRYRGYEDLRHDLACMFGIQGQLEDPYRTDWKLVYVDHENDIL
LVGDDPWEEFVSCVKSIKILSSVEVQQMSLDGDLGCIPQTQACSASDDANAWRA

Transcript Sequence

Transcript ID

Zm00001d045026_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:10505521:10516156:-1 gene:Zm00001d045026 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARF-transcription factor 27 description:Auxin response factor 7
Sequence

ATCAGGTTGCTGCTTCAATGCATAAGGAGCTGGACACCGTCCCCAGCTACCCATCTCTGC
CTTCTAAGTTGATCTGCAAGCTCCTAAGTCTCACCTTACATGCAGATTCTGAAACTGATG
AAGTTTATGCCCAGATGATGCTTCAGCCTGTGAACAAATATGATCGAGACGCAATGCTGG
CATCTGAACTGGGTCTGAAACAAAACAAGCAACCAACAGAATTCTTTTGCAAGACGTTGA
CAGCAAGCGACACAAGTACGCATGGGGGATTCTCAGTGCCACGCCGTGCAGCTGAGAAGA
TATTTCCACCGCTAGGTAACATGTTCGATAGGACTTTACGATGCAACCACCAGCCCAAGA
ACTCATTGCCAAGGATCTGCATGATATTTCATGGAAATTTCGACATATCTATCGAGGTCA
ACCGAAGAGGCATCTTTTGACAACTGGTTGGAGTGTCTTCGTCAGTACAAAAAGGCTGTT
AGCCGGTGATTCAGTTCTCTTTATAAGGGACGAGAAATCTCAACTTCTCTTAGGTATAAG
GCGTGCTAGCAGACCCCAACCAGCTCTGTCATCATCAGTTTTATCAAGTGACAGCATGCA
CATTGGAATCCTTGCAGCAGCAGCCCATGCTGCCGCAAATAGTAGCCCATTTACTATTTT
CTATAACCCAAGGGCAAGCCCATCAGAATTTGTCATCCCTTTAGCAAAATACAATAAGGC
TTTGTATACACAAGTGTCCCTTGGAATGCGATTCAGAATGCTCTTTGAGACAGAGGATTC
AGGGGTAAGAAGATACATGGGCACGATCACAGGCATTGGCGACTTAGATCCACTGCGATG
GAAGAATTCTCATTGGCGAAACCTTCAGGTTGGTTGGGATGAATCGACTGCATCTGAGAG
GCGCACCCGTGTTTCGATATGGGAGATTGAACCAGTTGCTACACCATTTTATATATGCCC
ACCACCATTTTTCAGGCCAAAGCTTCCTAAGCAAGCAGGAATGCCAGATGATGAAAACGA
GGTTGAGAGTGCTTTCAAAAGAGCGATGCCATGGCTTGCTGATGACTTCGCTCTGAAAGA
TGTCCAAAATGCATTATTTCCAGGCCTGAGCCTAGTTCAATGGATGGCTATGCAGCAAAA
TCCTCAGATGCTAGCAACTGCTTCCCCTGCTGTACAGTCGCAGTACTTGACCTCTAATGC
ACTGGGTATGCAGGATGGGATAGGCAGTGTCAGTGAAGATCCAACAAAAAGATTGACTAT
GCAGGCCCAAAATATTGGCTTACCTAATTTACAGGCTGGTTCGAAAGTGGACCACCCTGC
AATTACCCCATTAGCTCAACACCAGCAACAGCCTCACCATGTATTGCAACAACAGCAGGT
CCAACCACTGCAGCAAAGTTCTGCGATCCTACAGCAACAGCAAGCCCAGTTGTTGCAGCA
AAATGCCATTCACTTGCAGCAGCAGCAAGAACAACTCCAACGGCAACAATCACAGCCGCA
GCAACAGTTCAAAGCTACTGCATGTCTTCAGTCATCGGATCAGCACAAGCTGAAAGAGCA
ACAGCCTTCAGGTGGACAAGCTGCCTCACAAGTACATTTGTTAAACCAGATTTTGCAACC
ATCTTCATCTCAGCTACAACAGCTGGGTTTACCCAAGTCACCTACTCAGCGCCCAGGGTT
ACCAAGTCTAACAACAATGGGTTCTTTGCAGCAGTCACAATTACCTCAGACTCCACAGCC
GCAACAAACAGCAGAATACCACCAGGCACTCCTACAAAGTCAACAACCCCAACTACAACA
GCTATCACAATCAGAACTGCAGCTGCAGCTGCTTCAAAAGATTCAACAACAAAATCTGCT
ATCTCAACTGAACCCACAGCATCAGTCCCAGCTGATCCAACAATTGTCTCAGAAAAGCCA
GGAAATTCTCCAGCAACAAGTTCTTCAACATCAGTTTGGTGGTGCTGATGCCATGGGTCA
GCTCAAACATTTACAGCAAACACCTTTGAACCATAATACAGGATCCTTGCCACCCCAGCA
ACTTGTAAGATCACACTCAGCACTCACTGAGAGCGAAGAACCTTCCAGCTCAACAGTTCC
ATCTGGCAGCCGTATCTCCCCAATAAATTCATTTAGTAGAGCAAACCAAGGAACCAGAAA
TTTGCCTGAGATGCCAGCAACACCGCACATTGAGCACTTACTTCAGGAAATTCAAAGTAA
GACAGATAATCGAATCAAGAATGATATACAAGGTAGTAAGGAAACGGTCCATGCACCTAA
TCGTCATCTAGCTTCAGATCAACTTGATGCGTCATCTGCTACCTCCTTTTGCTTAGATGA
GAGCCCACGAGAAGGCTTTTCCTTTCCTCCAGTTTGTTTGGATAACAATGTTCAAGTTGA
TCCAAGAGAGAATTTTCTTATTGCGGAAAATGTGGACACATTAATGCCTGACGCCCTGTT
GTCAAGAGGGATGTCGTCTGGAAAGGGTATATGCAATCTACCTTCTGGACAAAGGGATCA
TAGGGATGTGGAAAACGAGCTATCCTCTGCTGCATTCAGCTCCCAGTCATTTGGTGTGCC
GGACATGTCTTTTAAGCCTGGATGTTCAAGTGATGTTGCTGTTGCTGATGGTGGAATGGC
AAGCCAAGGACTGTGGAATAGTCAAACACAGCGGATGAGAACCTTCACCAAGGTTCAAAA
GCGTGGATCCGTTGGGAGATCAATTGATATAACACGGTACCGAGGTTACGAAGATCTTCG
GCATGATCTTGCATGCATGTTCGGTATTCAAGGGCAGCTTGAAGATCCCTACAGGACGGA
CTGGAAGCTGGTCTATGTTGACCACGAAAATGACATCCTCCTTGTTGGCGACGACCCATG
GGAGGAGTTTGTAAGCTGTGTCAAGAGCATTAAAATATTGTCATCTGTTGAAGTACAGCA
AATGAGCTTGGATGGTGACCTTGGCTGCATCCCTCAAACTCAAGCCTGTAGTGCTTCTGA
TGACGCAAATGCATGGAGGGCCTGACGTAAATACTAATATGTTCCTTACCATTTTTAAAC
AATACTGAGAGTCAGGGGTCAAAGAAGTGAAACACACGTCTAACGTAATCACGAGGTACT
GTTACTTAGAGCCAACTCACTGACAGAGTCGATGAGAAGCTCGTGGCGGAAGTTGTTCAG
CAAGCTGCCATATTTTGGAGGCCTTGACGGCTGACGCTTTGTTCCACTGAAATCGGGTAA
TTACTCAACACAATCATATTAGTTTCCTTCTTGTGTGTGTAAGTTGGGTGGGGGTGGGGG
GTATAATGAATTTGAGAAGCTACTCTGCTTATTAGAACCTACATTCACTGTAATCCTCCT
ACAAAGTTGTTCGATTATCTCAGTGTATATATGTGCGCTGTAGAACCGTGACTGTCAGTT
TTGCAACTCGCAATCCCCAATGTAATTGTTCCTGTGTGCTGCTTTAACAGCTGAAGTACT
ATTATAAATTGTATTATCTGTAACAGAAAAAAGATTTGGTGT