Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d045021_T011
CDS Infomation

cds chromosome:B73_RefGen_v4:9:10449985:10453565:-1 gene:Zm00001d045021 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable phosphopantothenoylcysteine decarboxylase
Sequence

ATGGCTACATCAGAGCCAGTACAAGAGAGTTTGGTGGTGCACTACTCACAACCTAGTAGG
CCCCGGGTCCTCCTTGCTGCTTCAGGAAGTGTAGCCGCTATAAAATTTGAGAGCCTTTGC
CGTAGCTTCTCTGAGTGGGCGGATGTCCGAGCTGTGGCCACCACGCCATCCTTGCACTTC
GTTGATAGATCATCTCTACCAAGTGGCATCGTTCTTTACACTGATGACGATGAATGGTCT
ACCTGGAAGAAGATAGGAGATGAAGTCTTACACATCGAGCTGCGGAAATGGGCAGACGTT
ATGGTGATCGCTCCATTGTCAGCAAATACCCTGGCTAAGATCGCCGGTGGGTTATGCGAC
AACCTCTTGACCTGCATCGTGAGAGCGTGGGACTACAGCAAACCGCTCTTTGTTGCCCCA
GCCATGAACACGTTAATGTGGAACAACCCATTCACGGAGCGGCATCTTCACACAATCAAC
CAACTGGGCATAGCCTTGATCCCCCCAGTTACCAAAAGGCTGGCCTGTGGCGATTACGGG
AACGGCGCAATGGCCGAAACCTCGCAGATCCATACTTCCGTGAGGCTCGCGTGCAAGACG
CAACCGCACGATGCGAGCAGTTCACTCGCGGGTCCTGTCAGTAATAACCGGCCATCTAGC
TGA

Peptide Sequence

PEP ID

Zm00001d045021_P011
PEP Infomation

pep chromosome:B73_RefGen_v4:9:10449985:10453565:-1 gene:Zm00001d045021 transcript:Zm00001d045021_T011 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable phosphopantothenoylcysteine decarboxylase
Sequence

MATSEPVQESLVVHYSQPSRPRVLLAASGSVAAIKFESLCRSFSEWADVRAVATTPSLHF
VDRSSLPSGIVLYTDDDEWSTWKKIGDEVLHIELRKWADVMVIAPLSANTLAKIAGGLCD
NLLTCIVRAWDYSKPLFVAPAMNTLMWNNPFTERHLHTINQLGIALIPPVTKRLACGDYG
NGAMAETSQIHTSVRLACKTQPHDASSSLAGPVSNNRPSS

Transcript Sequence

Transcript ID

Zm00001d045021_T011
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:10449985:10453565:-1 gene:Zm00001d045021 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable phosphopantothenoylcysteine decarboxylase
Sequence

GCTCTCCCCAAACTACTCTGTGCCCCGTCAGATCGACCTGGACTTTGGCGGCAGCTACTT
CTAGAACGCGGCGGCACGGGCGTGCTGCTACTTCTGCTTCCTCTCCGACGCTTGCTGAGC
TGATGGCTACATCAGAGCCAGTACAAGAGAGTTTGGTGGTGCACTACTCACAACCTAGTA
GGCCCCGGGTCCTCCTTGCTGCTTCAGGAAGTGTAGCCGCTATAAAATTTGAGAGCCTTT
GCCGTAGCTTCTCTGAGTGGGCGGATGTCCGAGCTGTGGCCACCACGCCATCCTTGCACT
TCGTTGATAGATCATCTCTACCAAGTGGCATCGTTCTTTACACTGATGACGATGAATGGT
CTACCTGGAAGAAGATAGGAGATGAAGTCTTACACATCGAGCTGCGGAAATGGGCAGACG
TTATGGTGATCGCTCCATTGTCAGCAAATACCCTGGCTAAGATCGCCGGTGGGTTATGCG
ACAACCTCTTGACCTGCATCGTGAGAGCGTGGGACTACAGCAAACCGCTCTTTGTTGCCC
CAGCCATGAACACGTTAATGTGGAACAACCCATTCACGGAGCGGCATCTTCACACAATCA
ACCAACTGGGCATAGCCTTGATCCCCCCAGTTACCAAAAGGCTGGCCTGTGGCGATTACG
GGAACGGCGCAATGGCCGAAACCTCGCAGATCCATACTTCCGTGAGGCTCGCGTGCAAGA
CGCAACCGCACGATGCGAGCAGTTCACTCGCGGGTCCTGTCAGTAATAACCGGCCATCTA
GCTGATGCAGCAGTTGGCCACTTGATTGTCAAGCTTAGGAATTTGTTTTATATGCAGTGT
GCATCTGGAGTGTTGTAACAGATTTTTTTTCCAACTAGTGTTTGTGTGTATTGAAATTGG
GGGGGAAAGGCTGTTGTCACAGGATAACAATAACTTCC