Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d044903_T042
CDS Infomation	cds chromosome:B73_RefGen_v4:9:6773024:6796452:-1 gene:Zm00001d044903 gene_biotype:protein_coding transcript_biotype:protein_coding description:Kinesin-like protein KCA2
Sequence	ATGGGGGTCCAAGAATCCTTTGTGGAGCTTGTTCAAGAGAAGGTTGAAAATCCACTAGAG TTTTCTGCGGCACTAAAGATAGCACTTCAAAACCGATCAGTAAATTCGCCAAAGGCCATG GTTTCTCACCTGATCATTACCATTCATATACACTACAGAAACTATGTAACAGGGGAGCAT CTATACAGTAAGCTTTCTCTAGTGGATTTGCCAGCAAGTGAATGCTTGCTTGAAGAAGAT GCCAACAGGGACAATGTAACAGATTTCTTGCATGTCTCAAAGTCACTTTCTGTGTTGGGT GATGCATTTGCCTCTTTAAGCGCAAAGAAGGAGCCTGTTCTATATGGGAATTCAAGAATC ACACAAATCTTAGCTGACTCTCTAGGAAGTAGCTCAAAGATCTTGCTGATCGTGCATGTA AGTCCAAGTGCTTCAAATTTGTCAAGAACTTTATCCACACTCAGTTTTTCTGCAAGAGCA AGAAATGCTGAGCTGAGCCTTGGGAATCGTGACACAATAAAGAAATGGAAAGACGTGGCA AATGATTCACGCAAACAATTGCATGACAAAGAAAAGGAGGTTCTAGACCTGCGGCAAGAA GTTATTGGGTTAAAACATTCTCTAAAAGAGGCTAACGACCAGTGCATACTTCTGTTCAAT GAAGTTCAAAAAGCCTGGAGAGTTTCATCTTCACTCCAAGCTGATCTCAAGTCTGAAAAT TTAATGCTTGCCGAGAAGCACAAGACTGAGAAAGAGCAGAATAACCAGCTAAGGGATCAG ATTTCTCATCTTTTGAAAGTTGAACAAGAGCAAAACCTAAAGATGCAGGAACGGGATTTA ACAATTCAGTCACTACAGACTAAACTCAAGTCCATTGAGTCTCAGCTTAATGAAGCCCTC AATGCTAGCGATGCTAGATCAACTATTGGGTCTGAATCTGCTTCAGTAATTTCTTCCCCA AAGATAACAGAATCAACTGCTGACTCATCTTCAGTGACGAAAAGGCTTGAGGAGGAATTG GCAAAAAGGGATGCCCTTATTGAGAAATTACATGAAGAGAATGAGAAGCTTTTTGACAGA CTTACAGAGAAGTCAGGATTAGGAAGTGCTCCACAGGCTTCAAGCCCTTCAGCAAACAAG CCAGCTAATGGTCAAGGAAGGGAGATAGGCAGGAGTGACAGCAGCAAAAGTCGATCACCA GATGTGTTTGCATCACCAGTGTCTCAGGATAAAACTGGAAACAGTGGAGCTATTGTAAAA TCAAGCAATGAGCTAGCAAAAACTACACCTGCTGGGGAGTACCTTACGTCTGCACTAATG GATTTTGATCCTGACCAGTTTGAGGGATTTGCAGCAATAGCTGATGGTGCTAATAAGCTT TTGATGCTGGTCTTGGCTGCAGTTATCAAAGCTGGTGCAGCTAGGGAGCATGAGATACTT GCCGAGATCCGTGATGCTGTGTTTTCATTCATTCGAAAGATGGAACCGAAAAAAGTTATG GATACTATGTTAGTTTCAAGAGTCAAGATATTATACATCAGATCTTTGCTTGCTAAATCA CCTGAACTACAGTCCATCAAGGTCTCTCCAGTTGAGCGTTTCTTGGAGAAATCAAATACT GGTCGAAGTAGAAGTTCTAGTAGGGGAAGTAGTCCTGGCAGATCTCCTGTTCACCACCAT GGTCATGGTTCCCGAACTGCGCTTGTTGATGAACATGTGCATGGTTTCAAGGTGAACATT AAACAGGAAAAGAAATCAAAATTCTCCTCAATTGTTCTGAAGCTTCGTGGTATCGAGGAG GAGACATGGAGACAGCATGTTACTGGAGGGAAGCTCCGGGAAATTACTGAGGAAGCTAAG GCCTTTTCAATTGGAAACAAGGCTTTAGCTGCTCTCTTTGTTCACACGCCAGCTGGTGAA TTACAGCGCCAAATTCGTGCATGGCTTGCTGAAAACTTTGAGTTTCTATCTGTAACTGGT GCGGATGCTGCTGGAGGAGCCGCAGGACAGCTTGAACTGCTGTCAACCGCTATTATGGAT GGCTGGATGGCTGGTCTTGGTACAGCGCAGCCCCCTACCACTGATGCTTTAGGCCAGCTT TTATCAGAATACACAAAGCGTGTTTACACATCTCAACTACAACACTTGAAGGACATAGCT GGCACATTGGCAACGGAGGAGGCTGATGATCCTGCACATGTCAGTAAACTCCGCTCTGCT CTGGAGTCTGTGGATCACAAAAGGAGAAAGATCATGCAACAAATGCGAACTGACACTGCC TTGTTAACAAAAGAAGAAGGTGGCTCACCAATTCGCAATCCTCTTACTGCTGCGGAGGAT GCACGATTAGCATCTCTCATATCTCTAGATAACATCTTGAAGCAAGTCAAGGAAGTAATT AGACAAAGCTCTACAGGACCTATGAGAAAATCAAAGAGGAAAGCTTTGCTAGAGTTATTG GATGACCTCTTGACACAGATGCCCTCTCTTCTTGATATAGATCATCCATGTGCTCAGAAG CAGATCATGGAGGCACGGAAAGTTGTCGAGTCACTGCAAGAAGACCCTGATGATCCTGCC CCACAGTCTAATGCATTGGGAGAGGGCGAGGTTTCACAGTGGAATGTACTGCAGTTCAAC ACGGGAACGACTGCGCCTTTCATCATAAAGTGCGGAGCAAATTCCAGTGGTGAACTGGTG ATTAAGGCTGATCTGCGAGTCCAGGAGCCTAAAGGTGGCGAGGTGATCCGTGTTGTTCCA AGACCAACAGTTCTTGCGGACTTGAGTTTTGAGGAAATAAAAGGTGTGTTTGAGCAATTG CCAGAGGCAGTTAGCTTGCTTGCCTTGGCACGAACAGCAGATGGTACAAGGGCCAGGTAT TCAAGATTGTACAGAACCTTAGCCAGCAAAGTGACGGCCTTGAAAGAGACTGTTGCAGAG ATGGAGAGAGGTGGTGTTTTCAAAGATGTACGATAA

Peptide Sequence

PEP ID	Zm00001d044903_P042
PEP Infomation	pep chromosome:B73_RefGen_v4:9:6773024:6796452:-1 gene:Zm00001d044903 transcript:Zm00001d044903_T042 gene_biotype:protein_coding transcript_biotype:protein_coding description:Kinesin-like protein KCA2
Sequence	MGVQESFVELVQEKVENPLEFSAALKIALQNRSVNSPKAMVSHLIITIHIHYRNYVTGEH LYSKLSLVDLPASECLLEEDANRDNVTDFLHVSKSLSVLGDAFASLSAKKEPVLYGNSRI TQILADSLGSSSKILLIVHVSPSASNLSRTLSTLSFSARARNAELSLGNRDTIKKWKDVA NDSRKQLHDKEKEVLDLRQEVIGLKHSLKEANDQCILLFNEVQKAWRVSSSLQADLKSEN LMLAEKHKTEKEQNNQLRDQISHLLKVEQEQNLKMQERDLTIQSLQTKLKSIESQLNEAL NASDARSTIGSESASVISSPKITESTADSSSVTKRLEEELAKRDALIEKLHEENEKLFDR LTEKSGLGSAPQASSPSANKPANGQGREIGRSDSSKSRSPDVFASPVSQDKTGNSGAIVK SSNELAKTTPAGEYLTSALMDFDPDQFEGFAAIADGANKLLMLVLAAVIKAGAAREHEIL AEIRDAVFSFIRKMEPKKVMDTMLVSRVKILYIRSLLAKSPELQSIKVSPVERFLEKSNT GRSRSSSRGSSPGRSPVHHHGHGSRTALVDEHVHGFKVNIKQEKKSKFSSIVLKLRGIEE ETWRQHVTGGKLREITEEAKAFSIGNKALAALFVHTPAGELQRQIRAWLAENFEFLSVTG ADAAGGAAGQLELLSTAIMDGWMAGLGTAQPPTTDALGQLLSEYTKRVYTSQLQHLKDIA GTLATEEADDPAHVSKLRSALESVDHKRRKIMQQMRTDTALLTKEEGGSPIRNPLTAAED ARLASLISLDNILKQVKEVIRQSSTGPMRKSKRKALLELLDDLLTQMPSLLDIDHPCAQK QIMEARKVVESLQEDPDDPAPQSNALGEGEVSQWNVLQFNTGTTAPFIIKCGANSSGELV IKADLRVQEPKGGEVIRVVPRPTVLADLSFEEIKGVFEQLPEAVSLLALARTADGTRARY SRLYRTLASKVTALKETVAEMERGGVFKDVR

Transcript Sequence

Transcript ID	Zm00001d044903_T042
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:6773024:6796452:-1 gene:Zm00001d044903 gene_biotype:protein_coding transcript_biotype:protein_coding description:Kinesin-like protein KCA2
Sequence	GTCCACAGCCACAGCCATCGCCACCTCCACCACCACCTCCTTCTCCTCCTCCTCCCGCAT CTCCTCATTGCAAAACCTCGGTTCATTTTCCTGTCGCGATCTAGGGTTTCCGGTCGCTGC GGCGCCAATGGCGGACTCGCGCCGCACCTGGTCCTGGGACGTGTCGGGGTTCGAGCCGCC GCAGCCGGCGACGACGCAGGCAGCGTCGGCACCGACCGCTATGCCGCGGGCTCCGCCGAC GGCCATGATGCCCCGCCCCTCCGCTGGGGCTCCCCGCGCCTCGGCCGGCGCAGTGCCCGT TGCCGACCAGCTGGACCAGCTCGTGGACAGCGTCCAGCTTGCTAGAGAGGACTGCTTGGA GCTTAGACAGGAAGCTAGCGACCTCCTTGAGTATTCTAATGCAAAATTGGGCCGTGTCAC CCGTTATCTTGGATTTCTTGCCGACAGAACTCGAAAATTAGATCAAGCTGCCCTTGAGAC TGAAGCTAGAATCACCCCTTTGATTCATGAGAAGAAAAGGCTTTTCAATGACCTATTGAC CTTGAAAGGCAATGTCAAAGTGTTTTGTCGTTGTAGACCACTATTTGAAGATGAGGGTCC ATCAGTACTAGAGTTTCCGGATGATTTTAGTATCCGTGTAAACACAGGAGATGAATCTTT AACCAATCCTAAGAAGGATTATGAGTTTGATAGGGTATATGGACCCCACATCGGGCAAGG CGCTCTTTCCAGGAAGGATCTAGTCACGATCGTGGTTTATATCTGCGGAGCTTTGAAGAA CTGTTTGATCTTTCAAACTCGGATACTACTTCTACAGCACATTTTAACTTTTATTTTACT GCCTGTGAGCTCTACAATGATCAGGTTAGGGATTTGCTATCAGAATCTAGTAGCACTGTC CCAAAAGTTCGAATGGGGGTCCAAGAATCCTTTGTGGAGCTTGTTCAAGAGAAGGTTGAA AATCCACTAGAGTTTTCTGCGGCACTAAAGATAGCACTTCAAAACCGATCAGTAAATTCG CCAAAGGCCATGGTTTCTCACCTGATCATTACCATTCATATACACTACAGAAACTATGTA ACAGGGGAGCATCTATACAGTAAGCTTTCTCTAGTGGATTTGCCAGCAAGTGAATGCTTG CTTGAAGAAGATGCCAACAGGGACAATGTAACAGATTTCTTGCATGTCTCAAAGTCACTT TCTGTGTTGGGTGATGCATTTGCCTCTTTAAGCGCAAAGAAGGAGCCTGTTCTATATGGG AATTCAAGAATCACACAAATCTTAGCTGACTCTCTAGGAAGTAGCTCAAAGATCTTGCTG ATCGTGCATGTAAGTCCAAGTGCTTCAAATTTGTCAAGAACTTTATCCACACTCAGTTTT TCTGCAAGAGCAAGAAATGCTGAGCTGAGCCTTGGGAATCGTGACACAATAAAGAAATGG AAAGACGTGGCAAATGATTCACGCAAACAATTGCATGACAAAGAAAAGGAGGTTCTAGAC CTGCGGCAAGAAGTTATTGGGTTAAAACATTCTCTAAAAGAGGCTAACGACCAGTGCATA CTTCTGTTCAATGAAGTTCAAAAAGCCTGGAGAGTTTCATCTTCACTCCAAGCTGATCTC AAGTCTGAAAATTTAATGCTTGCCGAGAAGCACAAGACTGAGAAAGAGCAGAATAACCAG CTAAGGGATCAGATTTCTCATCTTTTGAAAGTTGAACAAGAGCAAAACCTAAAGATGCAG GAACGGGATTTAACAATTCAGTCACTACAGACTAAACTCAAGTCCATTGAGTCTCAGCTT AATGAAGCCCTCAATGCTAGCGATGCTAGATCAACTATTGGGTCTGAATCTGCTTCAGTA ATTTCTTCCCCAAAGATAACAGAATCAACTGCTGACTCATCTTCAGTGACGAAAAGGCTT GAGGAGGAATTGGCAAAAAGGGATGCCCTTATTGAGAAATTACATGAAGAGAATGAGAAG CTTTTTGACAGACTTACAGAGAAGTCAGGATTAGGAAGTGCTCCACAGGCTTCAAGCCCT TCAGCAAACAAGCCAGCTAATGGTCAAGGAAGGGAGATAGGCAGGAGTGACAGCAGCAAA AGTCGATCACCAGATGTGTTTGCATCACCAGTGTCTCAGGATAAAACTGGAAACAGTGGA GCTATTGTAAAATCAAGCAATGAGCTAGCAAAAACTACACCTGCTGGGGAGTACCTTACG TCTGCACTAATGGATTTTGATCCTGACCAGTTTGAGGGATTTGCAGCAATAGCTGATGGT GCTAATAAGCTTTTGATGCTGGTCTTGGCTGCAGTTATCAAAGCTGGTGCAGCTAGGGAG CATGAGATACTTGCCGAGATCCGTGATGCTGTGTTTTCATTCATTCGAAAGATGGAACCG AAAAAAGTTATGGATACTATGTTAGTTTCAAGAGTCAAGATATTATACATCAGATCTTTG CTTGCTAAATCACCTGAACTACAGTCCATCAAGGTCTCTCCAGTTGAGCGTTTCTTGGAG AAATCAAATACTGGTCGAAGTAGAAGTTCTAGTAGGGGAAGTAGTCCTGGCAGATCTCCT GTTCACCACCATGGTCATGGTTCCCGAACTGCGCTTGTTGATGAACATGTGCATGGTTTC AAGGTGAACATTAAACAGGAAAAGAAATCAAAATTCTCCTCAATTGTTCTGAAGCTTCGT GGTATCGAGGAGGAGACATGGAGACAGCATGTTACTGGAGGGAAGCTCCGGGAAATTACT GAGGAAGCTAAGGCCTTTTCAATTGGAAACAAGGCTTTAGCTGCTCTCTTTGTTCACACG CCAGCTGGTGAATTACAGCGCCAAATTCGTGCATGGCTTGCTGAAAACTTTGAGTTTCTA TCTGTAACTGGTGCGGATGCTGCTGGAGGAGCCGCAGGACAGCTTGAACTGCTGTCAACC GCTATTATGGATGGCTGGATGGCTGGTCTTGGTACAGCGCAGCCCCCTACCACTGATGCT TTAGGCCAGCTTTTATCAGAATACACAAAGCGTGTTTACACATCTCAACTACAACACTTG AAGGACATAGCTGGCACATTGGCAACGGAGGAGGCTGATGATCCTGCACATGTCAGTAAA CTCCGCTCTGCTCTGGAGTCTGTGGATCACAAAAGGAGAAAGATCATGCAACAAATGCGA ACTGACACTGCCTTGTTAACAAAAGAAGAAGGTGGCTCACCAATTCGCAATCCTCTTACT GCTGCGGAGGATGCACGATTAGCATCTCTCATATCTCTAGATAACATCTTGAAGCAAGTC AAGGAAGTAATTAGACAAAGCTCTACAGGACCTATGAGAAAATCAAAGAGGAAAGCTTTG CTAGAGTTATTGGATGACCTCTTGACACAGATGCCCTCTCTTCTTGATATAGATCATCCA TGTGCTCAGAAGCAGATCATGGAGGCACGGAAAGTTGTCGAGTCACTGCAAGAAGACCCT GATGATCCTGCCCCACAGTCTAATGCATTGGGAGAGGGCGAGGTTTCACAGTGGAATGTA CTGCAGTTCAACACGGGAACGACTGCGCCTTTCATCATAAAGTGCGGAGCAAATTCCAGT GGTGAACTGGTGATTAAGGCTGATCTGCGAGTCCAGGAGCCTAAAGGTGGCGAGGTGATC CGTGTTGTTCCAAGACCAACAGTTCTTGCGGACTTGAGTTTTGAGGAAATAAAAGGTGTG TTTGAGCAATTGCCAGAGGCAGTTAGCTTGCTTGCCTTGGCACGAACAGCAGATGGTACA AGGGCCAGGTATTCAAGATTGTACAGAACCTTAGCCAGCAAAGTGACGGCCTTGAAAGAG ACTGTTGCAGAGATGGAGAGAGGTGGTGTTTTCAAAGATGTACGATAAATGCTGTGTTAT TGTAGAGTTATTTATGATATTGATGTTGTATATGGATGCCATTTGTCGGCATCCCTTG