Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d044859_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:9:5605959:5608685:-1 gene:Zm00001d044859 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative inositol polyphosphate phosphatase (Synaptogenin-like) family protein
Sequence	ATGTCCAACGTCTTCGACATGAAAGGGAGGGACATGAATGGTGCAGATGCGCAGAGCTGC AATGCAGCACGGGCGCGGTTGAAGAGCGCGAGCCTGCACCATGTGGATTTGCCCAGCAAC AGGCAAAAGGATGACACACGCCAGTACCAGATGTTTGTTGCCACATGGAATGTTGGAGGA AAGACTCCGAGCAACAGGCTCAACTTGCAAGATTTTCTCCAGGTTGAAGAATCGCCTGAC ATTTACGTCTTGGGGTTTCAGGAGATAGTTCCCCTGACCGCCGGAAACGTGCTGGTCGTG GAGGACAACGAGCCGGCGTCCAGGTGGCTGGGGCTCATCCACCAGGCGCTGAACGAGACC CAGGAGCAGCCCGACGACGACGACGACCCGCCGCCGCCGGAGCCGCCCGCAGACTCCCGG CGCCACCACCGCCGCCGCGACTCCTCGCTCTTCTTCCAGACGCCGTCGCTCAAGGTGCTC AGCAACAGCTACCGCGTCGACAGCGCGCTCGTCAAGACCTGCAACTGCTCCACCGAGCCG TCGTCCATGCGCCGCCGGGCAGCGGAGATACGCGCGTCCGTGTACCGCGCCGATGCAGAG GCCGAAGCGGCCGCCGGCGACGGCGAGACATCCACCAGCGGGTGCAACAACGACACGGAA GCAGCAAGCCACGGCGGTGGCGCTGGCACGCCGACGGCGCAGTGCGAGCCTGGCTGCGGC GGCGGCGGCAGCATAAGCTACTGCCTGATCGGGAGCAAGCAGATGGTGGGGCTGTTCCTG TCGGTGTGGGTGAAGAGGGAGCTGGTGGAGCACGTCGGCCACCTCCGCGTCGACTGCGTC GGCAGGGGCATCATGGGCTGGCTCGGCAACAAGGGCTGCATTGCCATCAGCATGACGCTG CACCGCACCAGCCTCTGCTTCGTCTGCAGCCACCTGGCCTCCGGCGAGAAGGAGGGCGAC GAGCTGCGCCGCAACGCCGACGTCGCCGAGATCCTCCGGAGCGCGCACTTCCCCCGCGCC TGCAAGCTGCCGGCCAGCCATAGAGTCCCCGAAAAGATTCTTGAGCACGACCGGATGATA TGGCTTGGGGACCTGAACTACCGAGTGTCGCTAAGCTACGAAGAGACGAGAACGTTGCTC GAGGAGAATGACTGGGACGAGCTTCTGAAGAAAGATCAGCTGATAATCGAGAGAGAAGCA GGAAGGGTGTTCAGTGGCTGGAACGAGGGCAAGATCTGCTTCGCGCCCACGTACAAGTAC ACGCACAACTCCGACGCGTACGCCGGCGAGACGGCCAAGTCCAAGAAGAAGCGGAGGACG CCGGCATGGTGCGACCGGATACTGTGGCGCGGCGACGGCATCGAGCAGCTGCAGTACCTG CGCGGCGAGTCCAGGTTCTCCGACCACCGGCCGGTCTGTGGCGTGTTCGCCGTCGAGCTG GACGCCGACGATGGCAGCAAGATCAGGAGAGCGTACTACTCCGTGAACGCGCGGATCGGC TATGACAAGACGGCGGCGTAG

Peptide Sequence

PEP ID	Zm00001d044859_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:9:5605959:5608685:-1 gene:Zm00001d044859 transcript:Zm00001d044859_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative inositol polyphosphate phosphatase (Synaptogenin-like) family protein
Sequence	MSNVFDMKGRDMNGADAQSCNAARARLKSASLHHVDLPSNRQKDDTRQYQMFVATWNVGG KTPSNRLNLQDFLQVEESPDIYVLGFQEIVPLTAGNVLVVEDNEPASRWLGLIHQALNET QEQPDDDDDPPPPEPPADSRRHHRRRDSSLFFQTPSLKVLSNSYRVDSALVKTCNCSTEP SSMRRRAAEIRASVYRADAEAEAAAGDGETSTSGCNNDTEAASHGGGAGTPTAQCEPGCG GGGSISYCLIGSKQMVGLFLSVWVKRELVEHVGHLRVDCVGRGIMGWLGNKGCIAISMTL HRTSLCFVCSHLASGEKEGDELRRNADVAEILRSAHFPRACKLPASHRVPEKILEHDRMI WLGDLNYRVSLSYEETRTLLEENDWDELLKKDQLIIEREAGRVFSGWNEGKICFAPTYKY THNSDAYAGETAKSKKKRRTPAWCDRILWRGDGIEQLQYLRGESRFSDHRPVCGVFAVEL DADDGSKIRRAYYSVNARIGYDKTAA

Transcript Sequence

Transcript ID	Zm00001d044859_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:5605959:5608685:-1 gene:Zm00001d044859 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative inositol polyphosphate phosphatase (Synaptogenin-like) family protein
Sequence	CTCGCTCGATAGCTTGGATGGGCAGAGCACCCTTCGCGGCAGACTCGAGGCGGCAGAAAT GGCGGAAATCTCCGGGTTCCTCCTCAAGCAACAGACCACGTGAACTACGACGAGGAGCCA GGCAACGGGCGCCATGTCCAACGTCTTCGACATGAAAGGGAGGGACATGAATGGTGCAGA TGCGCAGAGCTGCAATGCAGCACGGGCGCGGTTGAAGAGCGCGAGCCTGCACCATGTGGA TTTGCCCAGCAACAGGCAAAAGGATGACACACGCCAGTACCAGATGTTTGTTGCCACATG GAATGTTGGAGGAAAGACTCCGAGCAACAGGCTCAACTTGCAAGATTTTCTCCAGGTTGA AGAATCGCCTGACATTTACGTCTTGGGGTTTCAGGAGATAGTTCCCCTGACCGCCGGAAA CGTGCTGGTCGTGGAGGACAACGAGCCGGCGTCCAGGTGGCTGGGGCTCATCCACCAGGC GCTGAACGAGACCCAGGAGCAGCCCGACGACGACGACGACCCGCCGCCGCCGGAGCCGCC CGCAGACTCCCGGCGCCACCACCGCCGCCGCGACTCCTCGCTCTTCTTCCAGACGCCGTC GCTCAAGGTGCTCAGCAACAGCTACCGCGTCGACAGCGCGCTCGTCAAGACCTGCAACTG CTCCACCGAGCCGTCGTCCATGCGCCGCCGGGCAGCGGAGATACGCGCGTCCGTGTACCG CGCCGATGCAGAGGCCGAAGCGGCCGCCGGCGACGGCGAGACATCCACCAGCGGGTGCAA CAACGACACGGAAGCAGCAAGCCACGGCGGTGGCGCTGGCACGCCGACGGCGCAGTGCGA GCCTGGCTGCGGCGGCGGCGGCAGCATAAGCTACTGCCTGATCGGGAGCAAGCAGATGGT GGGGCTGTTCCTGTCGGTGTGGGTGAAGAGGGAGCTGGTGGAGCACGTCGGCCACCTCCG CGTCGACTGCGTCGGCAGGGGCATCATGGGCTGGCTCGGCAACAAGGGCTGCATTGCCAT CAGCATGACGCTGCACCGCACCAGCCTCTGCTTCGTCTGCAGCCACCTGGCCTCCGGCGA GAAGGAGGGCGACGAGCTGCGCCGCAACGCCGACGTCGCCGAGATCCTCCGGAGCGCGCA CTTCCCCCGCGCCTGCAAGCTGCCGGCCAGCCATAGAGTCCCCGAAAAGATTCTTGAGCA CGACCGGATGATATGGCTTGGGGACCTGAACTACCGAGTGTCGCTAAGCTACGAAGAGAC GAGAACGTTGCTCGAGGAGAATGACTGGGACGAGCTTCTGAAGAAAGATCAGCTGATAAT CGAGAGAGAAGCAGGAAGGGTGTTCAGTGGCTGGAACGAGGGCAAGATCTGCTTCGCGCC CACGTACAAGTACACGCACAACTCCGACGCGTACGCCGGCGAGACGGCCAAGTCCAAGAA GAAGCGGAGGACGCCGGCATGGTGCGACCGGATACTGTGGCGCGGCGACGGCATCGAGCA GCTGCAGTACCTGCGCGGCGAGTCCAGGTTCTCCGACCACCGGCCGGTCTGTGGCGTGTT CGCCGTCGAGCTGGACGCCGACGATGGCAGCAAGATCAGGAGAGCGTACTACTCCGTGAA CGCGCGGATCGGCTATGACAAGACGGCGGCGTAGAGCTTCTGCGAGCCACCGTAGTGGAA TGTTGTGTGTAGGCAAGATGACTAGACCAGTACAGATTGTACAGACCATTGATGCATGGC AGTGGCAGCTCAAGTCTGAGGAGCACGCTTTCGTTGTGTATTTGTGTGCCGTCTGTGCCT GGCGGAAAAGATCCAACGGTGTCCGGTGTCCCCTACAACACATGCAGATAGCAATTCTTT TCTCTTGTCCTCTTTTTTTTTTAAAAAAAAAGCAGGACTTACCAAACCATAGTATCACAT GTTCTTCCTCATCATGGTGTTATGGGCAGAGTCTGCAAGGAGGTGGTTACATT