Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d044843_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:9:4935211:4937001:1 gene:Zm00001d044843 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCCATCGCCGCCGCCGTCCACGGCAGCGGCGGCGGCGCTGCAGCTGGAGCCCCTCCTC CCGCACTTGTCCACGCTTTCCCATTACAAGCAGTTCCACGCGCGCCTCCATGCCTTGGGC ACGCTCCATTCCTACCCTTCCCTCCGCGCGCGCTTCCTCGACCGCCTAGCGCTCTTGCCG CACGCCGACGCGCTTCCGCACGCGCTACTCCTCCTCCGCTCCCTCCCGTCCCCCGCAACC AACGACTTCAACGCCGCCCTGCGCGGCCTAGCCGCCTCCCCGCACCCTGCGCGCTCTCTC CTCCTCCTTGCCGGCCGCCTCCTCCCTGCTCCCGCCCCGCCACGGCCTCGCCTCGATGCG CTCTCCCTCTCCTTCGCGCTGAAGGCCACAGCCCGATGCTCCGACGCGTTCGCCACACTC CAGCTCCACGCGACCCTTTTTCGCCTCGGTGTGGCTGCTGATGTCCGCCTGATGACCACG CTGCTGGACTCCTATGCCAAGTGCGGCGACGTCGCGTCCGCACGGAAGGTGTTTGACGAA ATGCCCGTGCGCGACGTGGCCACATGGAACGCGCTGCTCGCAGGGCTGGCGCAGGGGACG GAGCCGAATCTCGCTCTATTGCTATTCCGCAGGCTGGCAGGGAGCTTTCGGGAGTTGCCG CCAAGGGAGGAGCCAAATGCGGTGACTGTTGTCGCTGCACTTTCTGCATGTGCACAACTT GGAACCTTAAAGGATGGATTGGCTGTGCATGAGTTTGCTCGTACAATAGGAGCTGTGGAC AATGTTTGTGTCGGCAACGCACTTATTGACATGTACTCCAAGTGTGGCTCACTGAGCCGG GCTCTTGAAGTGTTCCATTCCATCAAGCTAGAAGACCGAACACTTGTGTCCTACAATGCT ACAATTCAGGCGCTTTCCATCCATGGGCATGGGGAAGATGCACTGAAGCTGTTTGATGAA ATGCCAGCTCGTATTGAACCGGACGAAATCACTTACCTTGCTGTGATGGGTGGGTGCAAC CATGCTGGGCTTGTTGATGATGGGCGCAGGGTTTTTGATTCCATGCGGGTTCCTCCCAAT ATGAAGCACTACGGGACCATTGTGGACCTCCTTGGCCGTGCAGGCCGCCTTGCTGAGGCA TATGACATGATTATGTCTATGCCATTTCCAGCGGATATTGTCCTCTGGCAGACATTGCTA GGTGCTGCCAAGATGCATGGTAATGTGGATCTAGCGGAGTTGGCTGCCACAAAGCTTGCT GATCTTGGCTCTAACGTTGATGGTGACTATGTGCTCCTGTCCAATGTATATGCATCCAAG TCCCGATGGGTGGATGTTGGTCGAGTCCGTGACACCATGCGAAGTAATGATGTGAAAAAA GTCCCTGGCTTCAGCTACACAGAAATAGATGGCGTAATGCATAAGTTCATAAATGGTGAC AAAGAACACATGAGGTGGAGGGAAATATATAGAGCATTAGATGAAATTGGGTCAAGAATC TGTGCTCTGGGGTATGAGCCAGAAACGAGCAATGTGCTACATGACATTGGGGAGGAGGAG AAGCAGTATGCTTTAAGCTACCACAGCGAGAAGCTGGCTATTGCATTTGGGTTAATTTCT ACACCACCTGGGGAGACTATTCGAGTGATCAAAAACCTCCGAACATGTGGAGACTGTCAT GTGGTGGCAAAACTTATCTCTAAAGCCTATAATCGGGTGATCATTATTCGGGACAGGGCA AGATTCCACCGTTTCGAAGATGGACATTGTTCCTGCAGAGATTACTGGTAA

Peptide Sequence

PEP ID	Zm00001d044843_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:9:4935211:4937001:1 gene:Zm00001d044843 transcript:Zm00001d044843_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MPSPPPSTAAAAALQLEPLLPHLSTLSHYKQFHARLHALGTLHSYPSLRARFLDRLALLP HADALPHALLLLRSLPSPATNDFNAALRGLAASPHPARSLLLLAGRLLPAPAPPRPRLDA LSLSFALKATARCSDAFATLQLHATLFRLGVAADVRLMTTLLDSYAKCGDVASARKVFDE MPVRDVATWNALLAGLAQGTEPNLALLLFRRLAGSFRELPPREEPNAVTVVAALSACAQL GTLKDGLAVHEFARTIGAVDNVCVGNALIDMYSKCGSLSRALEVFHSIKLEDRTLVSYNA TIQALSIHGHGEDALKLFDEMPARIEPDEITYLAVMGGCNHAGLVDDGRRVFDSMRVPPN MKHYGTIVDLLGRAGRLAEAYDMIMSMPFPADIVLWQTLLGAAKMHGNVDLAELAATKLA DLGSNVDGDYVLLSNVYASKSRWVDVGRVRDTMRSNDVKKVPGFSYTEIDGVMHKFINGD KEHMRWREIYRALDEIGSRICALGYEPETSNVLHDIGEEEKQYALSYHSEKLAIAFGLIS TPPGETIRVIKNLRTCGDCHVVAKLISKAYNRVIIIRDRARFHRFEDGHCSCRDYW

Transcript Sequence

Transcript ID	Zm00001d044843_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:4935211:4937001:1 gene:Zm00001d044843 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCCATCGCCGCCGCCGTCCACGGCAGCGGCGGCGGCGCTGCAGCTGGAGCCCCTCCTC CCGCACTTGTCCACGCTTTCCCATTACAAGCAGTTCCACGCGCGCCTCCATGCCTTGGGC ACGCTCCATTCCTACCCTTCCCTCCGCGCGCGCTTCCTCGACCGCCTAGCGCTCTTGCCG CACGCCGACGCGCTTCCGCACGCGCTACTCCTCCTCCGCTCCCTCCCGTCCCCCGCAACC AACGACTTCAACGCCGCCCTGCGCGGCCTAGCCGCCTCCCCGCACCCTGCGCGCTCTCTC CTCCTCCTTGCCGGCCGCCTCCTCCCTGCTCCCGCCCCGCCACGGCCTCGCCTCGATGCG CTCTCCCTCTCCTTCGCGCTGAAGGCCACAGCCCGATGCTCCGACGCGTTCGCCACACTC CAGCTCCACGCGACCCTTTTTCGCCTCGGTGTGGCTGCTGATGTCCGCCTGATGACCACG CTGCTGGACTCCTATGCCAAGTGCGGCGACGTCGCGTCCGCACGGAAGGTGTTTGACGAA ATGCCCGTGCGCGACGTGGCCACATGGAACGCGCTGCTCGCAGGGCTGGCGCAGGGGACG GAGCCGAATCTCGCTCTATTGCTATTCCGCAGGCTGGCAGGGAGCTTTCGGGAGTTGCCG CCAAGGGAGGAGCCAAATGCGGTGACTGTTGTCGCTGCACTTTCTGCATGTGCACAACTT GGAACCTTAAAGGATGGATTGGCTGTGCATGAGTTTGCTCGTACAATAGGAGCTGTGGAC AATGTTTGTGTCGGCAACGCACTTATTGACATGTACTCCAAGTGTGGCTCACTGAGCCGG GCTCTTGAAGTGTTCCATTCCATCAAGCTAGAAGACCGAACACTTGTGTCCTACAATGCT ACAATTCAGGCGCTTTCCATCCATGGGCATGGGGAAGATGCACTGAAGCTGTTTGATGAA ATGCCAGCTCGTATTGAACCGGACGAAATCACTTACCTTGCTGTGATGGGTGGGTGCAAC CATGCTGGGCTTGTTGATGATGGGCGCAGGGTTTTTGATTCCATGCGGGTTCCTCCCAAT ATGAAGCACTACGGGACCATTGTGGACCTCCTTGGCCGTGCAGGCCGCCTTGCTGAGGCA TATGACATGATTATGTCTATGCCATTTCCAGCGGATATTGTCCTCTGGCAGACATTGCTA GGTGCTGCCAAGATGCATGGTAATGTGGATCTAGCGGAGTTGGCTGCCACAAAGCTTGCT GATCTTGGCTCTAACGTTGATGGTGACTATGTGCTCCTGTCCAATGTATATGCATCCAAG TCCCGATGGGTGGATGTTGGTCGAGTCCGTGACACCATGCGAAGTAATGATGTGAAAAAA GTCCCTGGCTTCAGCTACACAGAAATAGATGGCGTAATGCATAAGTTCATAAATGGTGAC AAAGAACACATGAGGTGGAGGGAAATATATAGAGCATTAGATGAAATTGGGTCAAGAATC TGTGCTCTGGGGTATGAGCCAGAAACGAGCAATGTGCTACATGACATTGGGGAGGAGGAG AAGCAGTATGCTTTAAGCTACCACAGCGAGAAGCTGGCTATTGCATTTGGGTTAATTTCT ACACCACCTGGGGAGACTATTCGAGTGATCAAAAACCTCCGAACATGTGGAGACTGTCAT GTGGTGGCAAAACTTATCTCTAAAGCCTATAATCGGGTGATCATTATTCGGGACAGGGCA AGATTCCACCGTTTCGAAGATGGACATTGTTCCTGCAGAGATTACTGGTAA