Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d044771_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:9:1977977:1979089:-1 gene:Zm00001d044771 gene_biotype:protein_coding transcript_biotype:protein_coding description:Metalloendoproteinase 5-MMP
Sequence	ATGGCCAGCACACCCTCTCCTCTCCTCATGCTTGCCGCCATGGCGGTGGTGGCGGCGACG CTTGCCGTGGCGCCAGTCTCGTCAGCGGACCTGCCATCCGGTGTCGCATCCATCACGTCC AAGATCCCAAACCCATGGTCGGCCTTCCAGAACCTCACGGGCTGCCACTTGGGCGAGCAG CAGCAGGGCCTCGCCAAGGTCAAGGACTACCTCTCCCGCTTCGGCTACCTGCCCCCCGAG TCGTCCGGGTCGTTCAACGACGTCTTCGACGCCGACCTGGAGGAGGCCATCAAGGTGTAC CAGCGCAACTTCGGCCTGGGCATCACGGGCGTGATGGACGCGTCCACGGTGGCCCAGATG ATGGCTCCGCGGTGCGGCGTCGCCGACATCATCAACGGCACGTCCACCATGGGCGGCGGC AGCGCCTCGGCCTCGGCGGCGCACGCGCGCGGCCGGAACCTCTTCACCTACTTCCCGGGG TCCCCGTCGTGGCCGCGCTCCAGGAAGAGCCTGACGTACGCGGTCACGCAGACCTCGCTG ACCTCCATCGACCGCGCGACGCTGAGCCAGGTGTTGGCGCGGGCCTTCGCGCGGTGGTCG GCGGCCACGACGCTGACCTTCACGGAGACGGCGTCGGAGCGAGACGCGGACATCACCATC GGCTTCTACGCGGGGGACCACGGCGACGGCGAGGCGTTCGACGGGCCGCTGGGCACGCTG GCGCACGCCTTCTCGCCGACGGACGGGCGCTTCCACCTGGACGCGGCCGAGGCGTGGGAC GCCAGCGGCGACGTGGCGCGCGCGGCCTCCGACGTGGCCGTCGACCTCGAGTCCGTCGCC GTGCACGAGATCGGCCACCTCCTCGGCCTGGGCCACTCGGCCGAGCCCGCCGCCATCATG TTCCCCACCATCACCTCGCGCACCAGCAAGGTGGACCTGGCCCAGGACGACGTCGCCGGC ATCCAGAACCTGTACGGCGGCAACCCCAACTTCAAGGGCGTCGCGCCGCCCGCCACCAGC AGCCGGGACATGGACAGCGGCGCGACCACGAGCTCCCGGGGGCCGTGGACCGCCGCCGTT GCCGTGGCCGCTGGGCTCTTGGTAGCGTTGTAG

Peptide Sequence

PEP ID	Zm00001d044771_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:9:1977977:1979089:-1 gene:Zm00001d044771 transcript:Zm00001d044771_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Metalloendoproteinase 5-MMP
Sequence	MASTPSPLLMLAAMAVVAATLAVAPVSSADLPSGVASITSKIPNPWSAFQNLTGCHLGEQ QQGLAKVKDYLSRFGYLPPESSGSFNDVFDADLEEAIKVYQRNFGLGITGVMDASTVAQM MAPRCGVADIINGTSTMGGGSASASAAHARGRNLFTYFPGSPSWPRSRKSLTYAVTQTSL TSIDRATLSQVLARAFARWSAATTLTFTETASERDADITIGFYAGDHGDGEAFDGPLGTL AHAFSPTDGRFHLDAAEAWDASGDVARAASDVAVDLESVAVHEIGHLLGLGHSAEPAAIM FPTITSRTSKVDLAQDDVAGIQNLYGGNPNFKGVAPPATSSRDMDSGATTSSRGPWTAAV AVAAGLLVAL

Transcript Sequence

Transcript ID	Zm00001d044771_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:1977977:1979089:-1 gene:Zm00001d044771 gene_biotype:protein_coding transcript_biotype:protein_coding description:Metalloendoproteinase 5-MMP
Sequence	ATGGCCAGCACACCCTCTCCTCTCCTCATGCTTGCCGCCATGGCGGTGGTGGCGGCGACG CTTGCCGTGGCGCCAGTCTCGTCAGCGGACCTGCCATCCGGTGTCGCATCCATCACGTCC AAGATCCCAAACCCATGGTCGGCCTTCCAGAACCTCACGGGCTGCCACTTGGGCGAGCAG CAGCAGGGCCTCGCCAAGGTCAAGGACTACCTCTCCCGCTTCGGCTACCTGCCCCCCGAG TCGTCCGGGTCGTTCAACGACGTCTTCGACGCCGACCTGGAGGAGGCCATCAAGGTGTAC CAGCGCAACTTCGGCCTGGGCATCACGGGCGTGATGGACGCGTCCACGGTGGCCCAGATG ATGGCTCCGCGGTGCGGCGTCGCCGACATCATCAACGGCACGTCCACCATGGGCGGCGGC AGCGCCTCGGCCTCGGCGGCGCACGCGCGCGGCCGGAACCTCTTCACCTACTTCCCGGGG TCCCCGTCGTGGCCGCGCTCCAGGAAGAGCCTGACGTACGCGGTCACGCAGACCTCGCTG ACCTCCATCGACCGCGCGACGCTGAGCCAGGTGTTGGCGCGGGCCTTCGCGCGGTGGTCG GCGGCCACGACGCTGACCTTCACGGAGACGGCGTCGGAGCGAGACGCGGACATCACCATC GGCTTCTACGCGGGGGACCACGGCGACGGCGAGGCGTTCGACGGGCCGCTGGGCACGCTG GCGCACGCCTTCTCGCCGACGGACGGGCGCTTCCACCTGGACGCGGCCGAGGCGTGGGAC GCCAGCGGCGACGTGGCGCGCGCGGCCTCCGACGTGGCCGTCGACCTCGAGTCCGTCGCC GTGCACGAGATCGGCCACCTCCTCGGCCTGGGCCACTCGGCCGAGCCCGCCGCCATCATG TTCCCCACCATCACCTCGCGCACCAGCAAGGTGGACCTGGCCCAGGACGACGTCGCCGGC ATCCAGAACCTGTACGGCGGCAACCCCAACTTCAAGGGCGTCGCGCCGCCCGCCACCAGC AGCCGGGACATGGACAGCGGCGCGACCACGAGCTCCCGGGGGCCGTGGACCGCCGCCGTT GCCGTGGCCGCTGGGCTCTTGGTAGCGTTGTAG