Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d044703_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:235308100:235309596:-1 gene:Zm00001d044703 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome P450 94C1
Sequence

ATGACCGTCCTCGCCTCCTCCCTCTGCTTGGTGGCGCTGGCCCTGGTGCTCCTGCTCCTT
CGGCGCTGGCCGTGGTGCAGCTGCCATGTCTGCCGGGCGTACCTGACGGGGTCGTGGGAG
CGGGACTTCACCAACCTCGGTGACTGGTACGCGCACCTCATCCGGGAGTCGGCCACCGGC
ACCGTCCACGTCCACGTGCTGGGCTGCACCGTCACCGCCAACCCGGCCAACGTGGAGTAC
ATGCTCAAGACCAACTTCGACAACTTCCCCAAGGGCGAGACCTTCGCAACGCTCCTTGGG
GACCTCCTCGGCTGCGGCATCTTCAACGTGGACGGCCACGCGTGGCGCTACCAGCGCAAG
ATGGCCAGCCTGGAGCTCGGCAGCGTGGCCGTGCGGTCCTACGCCTTCGGGATCATCGCC
AGGGAGGTGGAGGCCCGGCTCATGCCGCTCCTCGCCGGCGCCGCCGACGCCGGCGCGGTG
GTCGACCTGCAGGACGTGTTCCGACGCTTCGCCTTCGACACCATCTGCAAGATCTCCTTC
GGCCTCGACCCGGGCTGCCTCGAGCGGGAGATGCCCATGTCCAAGCTCGCCGACGCCTTC
GACACCGCCACGCGCCTCTGCGCCATGCGCGGCGCCGCCGCGTCGCCGTTGCTCTGGAGG
GCCAAGCGCCTGCTCAACGTCGGCTCGGAGAGGGAGCTCAGGGAGGCCATCCGTCTGGTC
GACGAGCTCGCGGCTGCCGTGATCCGGGAGCGCCGCAAGCTGGGCGTCGCCAGCAGCCAC
GACCTCCTGTCGCGCTTCATGGTGGCCTCGGCCGGCGGCGACGCGCACCCCGGCGTTGAC
GATAAGTACCTCCGCGACATCGTAGTCAGCTTCCTCCTCGCGGGGCGCGACACCGTGTCC
TCGGCGCTCACCACGCTCTTCATGCTCCTGTCCAAGAACCCGGCCGTGGTGGCCGCCATG
CGCGCCGAGGCCGGGGACGGCGACGGCGACGGCGACTCAGCGCCGCTCACCTACGAGCAC
CTCAAGCGCCTGCACTACACCCACGCGGTGCTGTACGAGAACATGCGCCTGTTCCCGCCG
GTGCAGTTCGACTCCAAGTTCTGCGCCGGGCCCGACGTGCTCCCCGACGGCATCTACGTG
TCCGGCGGCACGCGCGTGATGTACCACCCCTACGCCATGGGCCGGATGCCGCGCATCTGG
GGCGCCGACCACGACGCGTTCCGCCCGGACCGCTGGCTCACGGGCGCCGGCGGTTCCTTC
GTCCCCGAGAGCCTGTACAAGTACCCGGTGTTCCAGGCGGGCCTCCGCGTGTGCCTCGGC
AAGGAGCTCGCCATCACGGAGATGAAGGCGGTCGGGGTGGCCGTGGTGAGGGCGTTCGAC
GTCCACGTCGTCGGGGACAGTGGCAGCGCCGCCTGCGCGCCAAAGTTCGTGTCGGGGCTC
ACCGCGTCCATTAGCGGCGGGCTCCCAGTGAGGATTAGTAGAAGAGTTCGAAGCTAG

Peptide Sequence

PEP ID

Zm00001d044703_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:235308100:235309596:-1 gene:Zm00001d044703 transcript:Zm00001d044703_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome P450 94C1
Sequence

MTVLASSLCLVALALVLLLLRRWPWCSCHVCRAYLTGSWERDFTNLGDWYAHLIRESATG
TVHVHVLGCTVTANPANVEYMLKTNFDNFPKGETFATLLGDLLGCGIFNVDGHAWRYQRK
MASLELGSVAVRSYAFGIIAREVEARLMPLLAGAADAGAVVDLQDVFRRFAFDTICKISF
GLDPGCLEREMPMSKLADAFDTATRLCAMRGAAASPLLWRAKRLLNVGSERELREAIRLV
DELAAAVIRERRKLGVASSHDLLSRFMVASAGGDAHPGVDDKYLRDIVVSFLLAGRDTVS
SALTTLFMLLSKNPAVVAAMRAEAGDGDGDGDSAPLTYEHLKRLHYTHAVLYENMRLFPP
VQFDSKFCAGPDVLPDGIYVSGGTRVMYHPYAMGRMPRIWGADHDAFRPDRWLTGAGGSF
VPESLYKYPVFQAGLRVCLGKELAITEMKAVGVAVVRAFDVHVVGDSGSAACAPKFVSGL
TASISGGLPVRISRRVRS

Transcript Sequence

Transcript ID

Zm00001d044703_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:235308100:235309596:-1 gene:Zm00001d044703 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome P450 94C1
Sequence

ATGACCGTCCTCGCCTCCTCCCTCTGCTTGGTGGCGCTGGCCCTGGTGCTCCTGCTCCTT
CGGCGCTGGCCGTGGTGCAGCTGCCATGTCTGCCGGGCGTACCTGACGGGGTCGTGGGAG
CGGGACTTCACCAACCTCGGTGACTGGTACGCGCACCTCATCCGGGAGTCGGCCACCGGC
ACCGTCCACGTCCACGTGCTGGGCTGCACCGTCACCGCCAACCCGGCCAACGTGGAGTAC
ATGCTCAAGACCAACTTCGACAACTTCCCCAAGGGCGAGACCTTCGCAACGCTCCTTGGG
GACCTCCTCGGCTGCGGCATCTTCAACGTGGACGGCCACGCGTGGCGCTACCAGCGCAAG
ATGGCCAGCCTGGAGCTCGGCAGCGTGGCCGTGCGGTCCTACGCCTTCGGGATCATCGCC
AGGGAGGTGGAGGCCCGGCTCATGCCGCTCCTCGCCGGCGCCGCCGACGCCGGCGCGGTG
GTCGACCTGCAGGACGTGTTCCGACGCTTCGCCTTCGACACCATCTGCAAGATCTCCTTC
GGCCTCGACCCGGGCTGCCTCGAGCGGGAGATGCCCATGTCCAAGCTCGCCGACGCCTTC
GACACCGCCACGCGCCTCTGCGCCATGCGCGGCGCCGCCGCGTCGCCGTTGCTCTGGAGG
GCCAAGCGCCTGCTCAACGTCGGCTCGGAGAGGGAGCTCAGGGAGGCCATCCGTCTGGTC
GACGAGCTCGCGGCTGCCGTGATCCGGGAGCGCCGCAAGCTGGGCGTCGCCAGCAGCCAC
GACCTCCTGTCGCGCTTCATGGTGGCCTCGGCCGGCGGCGACGCGCACCCCGGCGTTGAC
GATAAGTACCTCCGCGACATCGTAGTCAGCTTCCTCCTCGCGGGGCGCGACACCGTGTCC
TCGGCGCTCACCACGCTCTTCATGCTCCTGTCCAAGAACCCGGCCGTGGTGGCCGCCATG
CGCGCCGAGGCCGGGGACGGCGACGGCGACGGCGACTCAGCGCCGCTCACCTACGAGCAC
CTCAAGCGCCTGCACTACACCCACGCGGTGCTGTACGAGAACATGCGCCTGTTCCCGCCG
GTGCAGTTCGACTCCAAGTTCTGCGCCGGGCCCGACGTGCTCCCCGACGGCATCTACGTG
TCCGGCGGCACGCGCGTGATGTACCACCCCTACGCCATGGGCCGGATGCCGCGCATCTGG
GGCGCCGACCACGACGCGTTCCGCCCGGACCGCTGGCTCACGGGCGCCGGCGGTTCCTTC
GTCCCCGAGAGCCTGTACAAGTACCCGGTGTTCCAGGCGGGCCTCCGCGTGTGCCTCGGC
AAGGAGCTCGCCATCACGGAGATGAAGGCGGTCGGGGTGGCCGTGGTGAGGGCGTTCGAC
GTCCACGTCGTCGGGGACAGTGGCAGCGCCGCCTGCGCGCCAAAGTTCGTGTCGGGGCTC
ACCGCGTCCATTAGCGGCGGGCTCCCAGTGAGGATTAGTAGAAGAGTTCGAAGCTAG