Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d044689_T009
CDS Infomation

cds chromosome:B73_RefGen_v4:3:234975989:234981397:-1 gene:Zm00001d044689 gene_biotype:protein_coding transcript_biotype:protein_coding description:PAP/OAS1 substrate-binding domain superfamily
Sequence

ATGCTGATTAAAGACTGGTGTTACTATGAAACTCGCATTCTTGGTGCACACCATGGATTG
ATATCTACCTACGCTTTGGAGATTTTAGTGCTATACATTTTCCATATCTTCCATAAGTCT
TTGAATGGCCCATTAGCTGTCCTCTATAGGTTTCTCGATTACTATAGTCAATTTGATTGG
GATGCTAAGGGAATCAGCTTGTTTGGTCCTGTTTCCTTATCTTCACTACCTGATCTAGTT
ACTGACCCTCCAGTTATTCATGATGATGGTTTTCTTCTGCGGGAAAAGTTTCTCAGAGAA
TGTGCAGATGCATTTAGTGTCCCCCCTAGAAACTCTGAGAAAGATGCACAACTATTTTCT
CGGAAGTTTTTAAATATAGTAGATCCACTGAAACAAAGTAATAATCTTGGACGCAGTGTC
AGCAGAGGAAATTTTTACCGAATACGTAGTGCATTTGATTTTGGTGCTCGTAAGCTTGGG
AAGATTCTTCAAAGGCCTGTCTGTTATACTGTTGATGAAGTGAATCAGTTCTTTGGGAAC
ACATTAAAGAGAAATCGTATTGGGTTCAGACAAGATGTTTTAGTGAGCTCATCTGATGAT
GGTACATTGACTTATCATGCCACCAACGGTTCCTTGTCTCTAGGCTTGGATTGCAAAAGA
GTCAACAACTGCAGTGCACCTTTATACAGCAATCCCTGTGGTGATTTCTCTTATCGGTTT
AATAACATCAACATTTCAGATTCCATCAATCATGATGACTCAATAAAACAGAAACAATGT
AACTCTATTGCTGGAGAGAAAGCGATAAAGTCTATTTCTGATGGGTTGCTAGATAGTGAA
GGCTCAAGTCATGCTAGTACTGATGATTCAGTAAGTGTGAGGAACAGTGGTGACTTCTAT
GAAGCTTTAACAACTATCTCGCCATCTGGGAGACGTTATGCCCCACATCAATTTTACCAA
TTAGAAAATGGTAAGGTGGTTGTTAGACATAACACAAACATGTCACACCATGGGATGCCA
ACAAAGCAGTTCACAAGCAGATCTTACCACTCTTTTGAAGATGCCAAGTATCACAATGAG
TTTTCAGGAAGCTTTCTGCCACCCATTGAGCATAATGCTTACTCTTCTGCTGGCTTTGTT
AATGTTCTGGCCACCTCTAACTCAGCATGTACACATGAAAATTCACAACTTGGTGGAGCC
AATAATAACATCTTGAAAGATCTCACTGGAGATTTTGAGACATACTTCCATAATCTTCAG
TATGCGCAAGGGTTCCAGCAAGATAATCCAGTAAACCCGTTTTCCTCTGGAAGGCCTGCT
CCACCATCCCTGCAATGTCAGAACACGTGCCCTTCAAATGGTCGAGGAAGAAAAAATCCA
TATTCATATGCTAGCATGAATGGTGCAGTCCCTTGCCCTCCTTACCCATCTGGCTATCTT
GTGTGGAGTCCATTTATTCAACCAGATGATCCTATGGCTATGAGGACCCGTGGAACAGGC
ACCTACTTTTCTGACCGAAAATTGCGCAAGAATAGGCCACCCACTGGACGTGTGGAGAGA
GGAAGAAATCAGTTCGCTTCAAATAATTATCAAAGGTTCCATCACCATGTCAGAACAGAT
ATGCCTGCAGATATGGGATCTGGTCTGGAATTGAGGCATGAGCTACCACAGATACATATT
CCTGGTGCAACTGATCATGGAATGCCATCTCCAATGAGTATACCAATGTCATCGTCATCT
CTTAACTCTCCAAGAGATCAATTGAAGGTACCAGCTCATTCTCCATCTTCCCAGGTTCGA
AGGAATAATTTCCATGGCAATGGTTTCATGCTCCTGCAAGACAGTAAGCTTGAGTCCAGG
ACCTTTAACAGTAAACTTGAGTCTGGGATATTGGGGCCGTTGCCTTTAGAAGTTACCTCC
AAAGACCATGCTAGCAGATCAGAATCCGCTTCCAGCAATCAAGTTTCTGGACCTGTGAGT
ACTGTTTCTGCTCCTCGAAACACTACTACGACAGATTCCAATCTAATGAGGTATGTATGG
CATATTATTTTCATCGCCAGCACTAACAATAATTGTATGGCAGAAATGATGTTTAATGTA
GTGGGCATTTCCATGTTACAACAATTAGATGTTTTACTCCTTGTAGTTTGGTACTTTGGT
GTTTCTGCAAAGTTATTTAGATAG

Peptide Sequence

PEP ID

Zm00001d044689_P009
PEP Infomation

pep chromosome:B73_RefGen_v4:3:234975989:234981397:-1 gene:Zm00001d044689 transcript:Zm00001d044689_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:PAP/OAS1 substrate-binding domain superfamily
Sequence

MLIKDWCYYETRILGAHHGLISTYALEILVLYIFHIFHKSLNGPLAVLYRFLDYYSQFDW
DAKGISLFGPVSLSSLPDLVTDPPVIHDDGFLLREKFLRECADAFSVPPRNSEKDAQLFS
RKFLNIVDPLKQSNNLGRSVSRGNFYRIRSAFDFGARKLGKILQRPVCYTVDEVNQFFGN
TLKRNRIGFRQDVLVSSSDDGTLTYHATNGSLSLGLDCKRVNNCSAPLYSNPCGDFSYRF
NNINISDSINHDDSIKQKQCNSIAGEKAIKSISDGLLDSEGSSHASTDDSVSVRNSGDFY
EALTTISPSGRRYAPHQFYQLENGKVVVRHNTNMSHHGMPTKQFTSRSYHSFEDAKYHNE
FSGSFLPPIEHNAYSSAGFVNVLATSNSACTHENSQLGGANNNILKDLTGDFETYFHNLQ
YAQGFQQDNPVNPFSSGRPAPPSLQCQNTCPSNGRGRKNPYSYASMNGAVPCPPYPSGYL
VWSPFIQPDDPMAMRTRGTGTYFSDRKLRKNRPPTGRVERGRNQFASNNYQRFHHHVRTD
MPADMGSGLELRHELPQIHIPGATDHGMPSPMSIPMSSSSLNSPRDQLKVPAHSPSSQVR
RNNFHGNGFMLLQDSKLESRTFNSKLESGILGPLPLEVTSKDHASRSESASSNQVSGPVS
TVSAPRNTTTTDSNLMRYVWHIIFIASTNNNCMAEMMFNVVGISMLQQLDVLLLVVWYFG
VSAKLFR

Transcript Sequence

Transcript ID

Zm00001d044689_T009
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:234975989:234981397:-1 gene:Zm00001d044689 gene_biotype:protein_coding transcript_biotype:protein_coding description:PAP/OAS1 substrate-binding domain superfamily
Sequence

ATAAGAGCTCATGTTTTTAAACCCTTGTCGTTTGTTGCTGGGGGCTTTAGGTGTCAAGTG
TTTATTGGTGGTGACGAGTATAAACGTGTAACGGTGTGGATATACTTTGTCGGTTGCGCG
CTTGAGTCTCCATGTGATTTGGTGGGAATGACCTTTAATGTGAGCGCGAACTATCTGTCG
GCACGTGTTCGAATACCGCATTAAACACAATGAGGTTGTTGACAGTGGATTGGAGGGCTG
GGGCGCTGGGCCACACCTGTTATCTTAATGTCTGTTTTAGTGACGTGTCCCTTCATACAT
TGTTCATGTTGTTTTGAAGGAGAAGCTGTGCTCTTTTGTTATGCCTCAGTCCAGGTGTCA
GGACATCTTGAGTTGGATTGAAGATGATATGTTAAGATCTATTGTAGGATCGTATTATAT
AAAATATAAGAGTTTTTAAGATCGGGCCTACCTGATTCTGTCTAAGACACATTATTTAAA
TGTAGCATGTATTCCATTAATTATACATTCTTAAATTGTGTTTTAGAAGCATTGCAAATC
GTGGTACAAATGAATGATCTTTGTGTTTGTACAAATACAAATGTTGAATATGTAATTTTT
GTGATTGAGACACGTTTCTGCATTTATAGTTAATTACTCATAAATAGTTGCTAGTATTGA
TTGTATCGTGCAAGGACTATGCAAATAGCCACGATAGTTTTACCAAGTTTATTCTACCAT
TGTTGTAATGTGATAATTGTACCAAACTATGATCCTATTCCAATCTATGAGTGAATCTGT
AGATAAATGTGGGTGTATATGGTGTAAGGGTTTAAGATTTGGCTCATGTCTTTGACTTGG
CTGTCGTTTTTGAGGATGTTTTGGATTGCTGTTCATATGAGTGCACCCAATCCCATAGAT
CTGTCGAACACGTGTCACAATTTGAGGTAAATTGGCTACAAGGTCTACAGGGAGGGATAA
ATTCAGTTATTTAACAAGCCACTGAAGCATGTTTTAGTGCATTGCTTACTAGATAGTATT
TCACATGTGCATGTTTAGCTAGTATTGGTGCTTTTCTGCATGCGCCCGAGTGAGATATCG
CAGTTTTACTAAGGTTGGTGCTGCTCTGGTGCTGTCTCAATGCTACATTAATGCCACATC
AGAGGGATTGTACTGCAAACTTAACCTTTATGTTTGTAAAACATAGGTCTTTCCATTTGG
ATCTGTTCCATTGAAAACTTATCTTCCTGATGGAGACATTGACTTGACTACATTCGGCCC
TGCAATTTCTGATGAAAAATTAGCAAATGAAGTATGTGCTATTCTAAAATCAGAAGAGCA
TAGGAAAGATTCTGAATTTGATGTCAAAGATGTCCAGTATATCCATGCTGAGGTCAAACT
GGTGAAATGTGTAGTACAGAACATTATAGTAGATATCTCTGTGAATCAGATTGGGGGACT
CTGTACACTTTGTTTTCTGGAGAAGGTTGATGAGAATTTTGGAAAGAAACACCTCTTCAA
AAGAAGCGTAATGCTGATTAAAGACTGGTGTTACTATGAAACTCGCATTCTTGGTGCACA
CCATGGATTGATATCTACCTACGCTTTGGAGATTTTAGTGCTATACATTTTCCATATCTT
CCATAAGTCTTTGAATGGCCCATTAGCTGTCCTCTATAGGTTTCTCGATTACTATAGTCA
ATTTGATTGGGATGCTAAGGGAATCAGCTTGTTTGGTCCTGTTTCCTTATCTTCACTACC
TGATCTAGTTACTGACCCTCCAGTTATTCATGATGATGGTTTTCTTCTGCGGGAAAAGTT
TCTCAGAGAATGTGCAGATGCATTTAGTGTCCCCCCTAGAAACTCTGAGAAAGATGCACA
ACTATTTTCTCGGAAGTTTTTAAATATAGTAGATCCACTGAAACAAAGTAATAATCTTGG
ACGCAGTGTCAGCAGAGGAAATTTTTACCGAATACGTAGTGCATTTGATTTTGGTGCTCG
TAAGCTTGGGAAGATTCTTCAAAGGCCTGTCTGTTATACTGTTGATGAAGTGAATCAGTT
CTTTGGGAACACATTAAAGAGAAATCGTATTGGGTTCAGACAAGATGTTTTAGTGAGCTC
ATCTGATGATGGTACATTGACTTATCATGCCACCAACGGTTCCTTGTCTCTAGGCTTGGA
TTGCAAAAGAGTCAACAACTGCAGTGCACCTTTATACAGCAATCCCTGTGGTGATTTCTC
TTATCGGTTTAATAACATCAACATTTCAGATTCCATCAATCATGATGACTCAATAAAACA
GAAACAATGTAACTCTATTGCTGGAGAGAAAGCGATAAAGTCTATTTCTGATGGGTTGCT
AGATAGTGAAGGCTCAAGTCATGCTAGTACTGATGATTCAGTAAGTGTGAGGAACAGTGG
TGACTTCTATGAAGCTTTAACAACTATCTCGCCATCTGGGAGACGTTATGCCCCACATCA
ATTTTACCAATTAGAAAATGGTAAGGTGGTTGTTAGACATAACACAAACATGTCACACCA
TGGGATGCCAACAAAGCAGTTCACAAGCAGATCTTACCACTCTTTTGAAGATGCCAAGTA
TCACAATGAGTTTTCAGGAAGCTTTCTGCCACCCATTGAGCATAATGCTTACTCTTCTGC
TGGCTTTGTTAATGTTCTGGCCACCTCTAACTCAGCATGTACACATGAAAATTCACAACT
TGGTGGAGCCAATAATAACATCTTGAAAGATCTCACTGGAGATTTTGAGACATACTTCCA
TAATCTTCAGTATGCGCAAGGGTTCCAGCAAGATAATCCAGTAAACCCGTTTTCCTCTGG
AAGGCCTGCTCCACCATCCCTGCAATGTCAGAACACGTGCCCTTCAAATGGTCGAGGAAG
AAAAAATCCATATTCATATGCTAGCATGAATGGTGCAGTCCCTTGCCCTCCTTACCCATC
TGGCTATCTTGTGTGGAGTCCATTTATTCAACCAGATGATCCTATGGCTATGAGGACCCG
TGGAACAGGCACCTACTTTTCTGACCGAAAATTGCGCAAGAATAGGCCACCCACTGGACG
TGTGGAGAGAGGAAGAAATCAGTTCGCTTCAAATAATTATCAAAGGTTCCATCACCATGT
CAGAACAGATATGCCTGCAGATATGGGATCTGGTCTGGAATTGAGGCATGAGCTACCACA
GATACATATTCCTGGTGCAACTGATCATGGAATGCCATCTCCAATGAGTATACCAATGTC
ATCGTCATCTCTTAACTCTCCAAGAGATCAATTGAAGGTACCAGCTCATTCTCCATCTTC
CCAGGTTCGAAGGAATAATTTCCATGGCAATGGTTTCATGCTCCTGCAAGACAGTAAGCT
TGAGTCCAGGACCTTTAACAGTAAACTTGAGTCTGGGATATTGGGGCCGTTGCCTTTAGA
AGTTACCTCCAAAGACCATGCTAGCAGATCAGAATCCGCTTCCAGCAATCAAGTTTCTGG
ACCTGTGAGTACTGTTTCTGCTCCTCGAAACACTACTACGACAGATTCCAATCTAATGAG
GTATGTATGGCATATTATTTTCATCGCCAGCACTAACAATAATTGTATGGCAGAAATGAT
GTTTAATGTAGTGGGCATTTCCATGTTACAACAATTAGATGTTTTACTCCTTGTAGTTTG
GTACTTTGGTGTTTCTGCAAAGTTATTTAGATAGTTGTGATGTTGACGGTCGGGCATTAA
TACATAGAGTAAATTATACTGCATGTAATTTTTTTTTGATTATATCGTACTGGGTTCCTT
GGTCTTGACTCTTGAGAACCACACGTGCGTACCATTTTGATGGGAGGCAATTCAAGTTGT
CATTGGTCACATTATTATTACTATGTGAATCAAGAAAGAATTGGTGTCCTTGGATTCTGA
TGTCTTTTCAGATTTGTAAAAGCTTACTGATGTACTTGATAAATACACATCTAGATCATG
TTTTGTGCTGAGTTTACTGCGTTTATTACAACGTCTGACCCTGCACTGTACAATTCACAG
GGATGGCGCTCAATCATATCGCCTCAAGGACAGCAGAGACTTCCCCCCACTGTCCAGTTG
AATGTTGATGGCGGTACACTGTAGTATGAACTGAGAGGTGACTGTCAACGCCGCACTTGA
TCACCAGGCAAAATTACCGATGAATGGTCTGTGCTGAACCGCAGCAGTGGCACCGAGTTG
TTGCTCCCTGAAACCAGACAACATGTTGTATATCCTGCCATTTTCTTCCCGTACTCCAGG
CGTCAGATTCACCTTGTCCCTGCGATCAGCCTTACACCCTCATT