Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d044683_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:234824366:234825497:1 gene:Zm00001d044683 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable chalcone--flavonone isomerase 3
Sequence

ATGGACGACTGTGACGAAGAGCAACGTCGTTGCGCAGTGGGCTCGGAGACGGAGACGGTC
AACGTGGAAGGCATCCCGTTCCCGGCGGAGATCACCGTCGGCAACCCTCTCTCCCTCCTA
GGCACAGGTATCACGGACATCGAGATCCACTTCCTGCAGATCAAGTACAACGCCATCGGA
GTCTACCTCCACAACGCCGGCGGCGGCGACAGCACCACGCCCACGCTGCTGGGCCACCTC
GGGGCCTGGAAGGGCAAGACGGCGGAGGAGCTCCTAGCGGACGCCGCCTTCTGGGCCGCG
CTGGTCGCGGCCCCCGTCGAGAAGCTGTTCCGCGTCGTGGTCATCAAGGAGATCAAGGGC
TCGCAGTACGGCGTGCAGCTTGAGAGCTCCGTCCGCGACCGCCTCGCCGCCGCCGACCTC
TACGAGGACGACGAAGAGGAGGCGCTCGAGAAGGTCGCCGACTTCTTCCAGTCCAAGTAC
TTCAAGCCGGGCTCCGTCGTCACCTTCCACTTCCCGGCACCGGCCTCCGCCTCCCCGGGA
CCCGCGGCGGAGATCACCTTCGCGACGGAGGGCAAGGGCGACGCCAGGATCGCGGTGGAG
AACGGGAACGTCGCCGGGATGATCCAGACCTGGTACCTCGGCGGCGACTCCGCGGTGTCC
CCCAGCACCGTCCGCAGCCTGGCCAACCGTTTCGCCGCGCTGCTCGCCGTCGCCGCGTGA

Peptide Sequence

PEP ID

Zm00001d044683_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:234824366:234825497:1 gene:Zm00001d044683 transcript:Zm00001d044683_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable chalcone--flavonone isomerase 3
Sequence

MDDCDEEQRRCAVGSETETVNVEGIPFPAEITVGNPLSLLGTGITDIEIHFLQIKYNAIG
VYLHNAGGGDSTTPTLLGHLGAWKGKTAEELLADAAFWAALVAAPVEKLFRVVVIKEIKG
SQYGVQLESSVRDRLAAADLYEDDEEEALEKVADFFQSKYFKPGSVVTFHFPAPASASPG
PAAEITFATEGKGDARIAVENGNVAGMIQTWYLGGDSAVSPSTVRSLANRFAALLAVAA

Transcript Sequence

Transcript ID

Zm00001d044683_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:234824366:234825497:1 gene:Zm00001d044683 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable chalcone--flavonone isomerase 3
Sequence

ATGGACGACTGTGACGAAGAGCAACGTCGTTGCGCAGTGGGCTCGGAGACGGAGACGGTC
AACGTGGAAGGCATCCCGTTCCCGGCGGAGATCACCGTCGGCAACCCTCTCTCCCTCCTA
GGCACAGGTATCACGGACATCGAGATCCACTTCCTGCAGATCAAGTACAACGCCATCGGA
GTCTACCTCCACAACGCCGGCGGCGGCGACAGCACCACGCCCACGCTGCTGGGCCACCTC
GGGGCCTGGAAGGGCAAGACGGCGGAGGAGCTCCTAGCGGACGCCGCCTTCTGGGCCGCG
CTGGTCGCGGCCCCCGTCGAGAAGCTGTTCCGCGTCGTGGTCATCAAGGAGATCAAGGGC
TCGCAGTACGGCGTGCAGCTTGAGAGCTCCGTCCGCGACCGCCTCGCCGCCGCCGACCTC
TACGAGGACGACGAAGAGGAGGCGCTCGAGAAGGTCGCCGACTTCTTCCAGTCCAAGTAC
TTCAAGCCGGGCTCCGTCGTCACCTTCCACTTCCCGGCACCGGCCTCCGCCTCCCCGGGA
CCCGCGGCGGAGATCACCTTCGCGACGGAGGGCAAGGGCGACGCCAGGATCGCGGTGGAG
AACGGGAACGTCGCCGGGATGATCCAGACCTGGTACCTCGGCGGCGACTCCGCGGTGTCC
CCCAGCACCGTCCGCAGCCTGGCCAACCGTTTCGCCGCGCTGCTCGCCGTCGCCGCGTGA
TTTATACCGGTCGGCGGGCCGGTTGGTCGAGTTGCGTTGGATTTGAGTTCGTGAATGTCC
GTCCTGTACGCGTGTTGTCTCGTGTGTGTTGTCGTTTGCAGCGAATTTGCAAGTAATAAT
AATAAAAATTATGTCCGGTAGGTTGTGCAGATTGTCGTTGTGGAAACTGTAATATGAGAT
AGAAAATTTGACGGTCTCTCGACCTCGAATCCATGGATCATGGATGCACTACACTTCTCA
ATAAACGCTCTTCATAATTTTGCCTCCCCC