Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d044665_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:3:234410699:234416548:1 gene:Zm00001d044665 gene_biotype:protein_coding transcript_biotype:protein_coding description:V-type proton ATPase subunit C
Sequence

ATGGCAACCCGCTACTGGATCGTCTCTCTCCCCGTGCAGTCTCCCGGCGCCACCGCGACC
TCGCTTTGGTCGCGCCTGCAGGATGGCATCTCCCGCCACTCCTTCGACACCCCGCTGTAC
CGGTTCAACGTCCCGGACCTCCGCGTCGGCACCCTCGACTCCCTCCTCGCGCTCAGCGAT
GACCTCGTCAAGTCAAACGTGTTCGTCGAGGGCGTTTCGCACAAGATCCGGAGGCAGATC
GAAGACCTCGAGCGCGCCGGAGGCGTCGACAGCGGGGCCCTCACCGTCGATGGCGTTCCC
GTCGACACCTACCTCACCAGGTTCGTGTGGGATGAGGGCAAGTACCCCACAATGTCGTCG
CTCAAGGAGATCGTCGGCAGCATCCAGTCGCAGGTCGCCAAGATCGAGGATGACATGAAG
CTCTATGAAGACAATGAGTACGCACTCTACACCATAACACTTTTTGCTAAGGTTGTTGAC
AACTTTAAGGTCCGTGCTCGCGAGAAGGGTTTCCAGGTTCGTGATTTTGAGTATAGTCCT
GAAGCACAAGAAAGTAGAAAGCAGGAGATGGAGAAGTTACTGCTAGAGCAGGAAGTTATG
AGGACCTCGCTTCTGCAATGGTGCTATGCCAGCTACAGTGAGGTTTTCAGTTCCTGGATG
CACTTCTGCGCCGTGCGCATATTTGTAGAGAGCATTCTTAGATACGGTCTGCCACCATCG
TTCCTGTCTGCCGTTCTTGCTCCGTCTACAAAGGGCGAGAAGAAAGTGAGGAGCATCTTA
GAGGACCTTTGCGGCAATGTCCATAGTATTTATTGGAAAGGCGAAGATGACGTGGCAGTT
GCTGGTCTGGGAGGTGAATCAGAGGTCCATCCTTACGTCTCATTCACCATAAACTTTGTT
TGA

Peptide Sequence

PEP ID

Zm00001d044665_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:3:234410699:234416548:1 gene:Zm00001d044665 transcript:Zm00001d044665_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:V-type proton ATPase subunit C
Sequence

MATRYWIVSLPVQSPGATATSLWSRLQDGISRHSFDTPLYRFNVPDLRVGTLDSLLALSD
DLVKSNVFVEGVSHKIRRQIEDLERAGGVDSGALTVDGVPVDTYLTRFVWDEGKYPTMSS
LKEIVGSIQSQVAKIEDDMKLYEDNEYALYTITLFAKVVDNFKVRAREKGFQVRDFEYSP
EAQESRKQEMEKLLLEQEVMRTSLLQWCYASYSEVFSSWMHFCAVRIFVESILRYGLPPS
FLSAVLAPSTKGEKKVRSILEDLCGNVHSIYWKGEDDVAVAGLGGESEVHPYVSFTINFV

Transcript Sequence

Transcript ID

Zm00001d044665_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:234410699:234416548:1 gene:Zm00001d044665 gene_biotype:protein_coding transcript_biotype:protein_coding description:V-type proton ATPase subunit C
Sequence

GGCCCGGCGTCGTTCACTCCAACAAGGCCCAGACCAACCTCACTGATCCTCTCTCCCTCC
TCGCCGAGACGACGAGATCCATCGCCATCAGAGAATCCTAGCCCACCCAGACCAGGTGCC
CCACGGCGGTGCCGGCGATGGCAACCCGCTACTGGATCGTCTCTCTCCCCGTGCAGTCTC
CCGGCGCCACCGCGACCTCGCTTTGGTCGCGCCTGCAGGATGGCATCTCCCGCCACTCCT
TCGACACCCCGCTGTACCGGTTCAACGTCCCGGACCTCCGCGTCGGCACCCTCGACTCCC
TCCTCGCGCTCAGCGATGACCTCGTCAAGTCAAACGTGTTCGTCGAGGGCGTTTCGCACA
AGATCCGGAGGCAGATCGAAGACCTCGAGCGCGCCGGAGGCGTCGACAGCGGGGCCCTCA
CCGTCGATGGCGTTCCCGTCGACACCTACCTCACCAGGTTCGTGTGGGATGAGGGCAAGT
ACCCCACAATGTCGTCGCTCAAGGAGATCGTCGGCAGCATCCAGTCGCAGGTCGCCAAGA
TCGAGGATGACATGAAGCTCTATGAAGACAATGAGTACGCACTCTACACCATAACACTTT
TTGCTAAGGTTGTTGACAACTTTAAGGTCCGTGCTCGCGAGAAGGGTTTCCAGGTTCGTG
ATTTTGAGTATAGTCCTGAAGCACAAGAAAGTAGAAAGCAGGAGATGGAGAAGTTACTGC
TAGAGCAGGAAGTTATGAGGACCTCGCTTCTGCAATGGTGCTATGCCAGCTACAGTGAGG
TTTTCAGTTCCTGGATGCACTTCTGCGCCGTGCGCATATTTGTAGAGAGCATTCTTAGAT
ACGGTCTGCCACCATCGTTCCTGTCTGCCGTTCTTGCTCCGTCTACAAAGGGCGAGAAGA
AAGTGAGGAGCATCTTAGAGGACCTTTGCGGCAATGTCCATAGTATTTATTGGAAAGGCG
AAGATGACGTGGCAGTTGCTGGTCTGGGAGGTGAATCAGAGGTCCATCCTTACGTCTCAT
TCACCATAAACTTTGTTTGAGCATTACTGGTGTTACGCCGTCAAGTAAATCGAAACGATG
GAATGGTTCTGTACATTGCTAGTGTTACGGCAATTCTTTGTTGATCTGTCAGCTTTTATC
TGATCATGTAATTTATATATTGGATATATAAGCCGATCAATAATGTAGCTTTTGAGGAGA
CTGGAAGTAGATGGATCACGATCACCATGTAATTTGTAAAATGGGGCTACTGTTACTGTA
ATAAAGGCACATGTCAAATATCTTC