Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d044656_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:234154462:234158359:1 gene:Zm00001d044656 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat protein kinase family protein
Sequence	ATGGATCCATCTCCCCGCCAATGTCATGCACACACACTCCTCCTCCTCCTGTGCACCAGC GTCCTCGTTTTCCTCTCAAACAACTCAGCGTTCTCGTCGGCACAGCCCGGCAACAGGTCA GAGGCTGACCGCCAAGCCCTGCTCTGCTTCAAATCCGGCATCTCCGACGACCCTCGCCGC GTCCTCACGTCATGGAGCGCCGACTCGCTCAGCTTCTGCGGCTGGCGAGGGGTCAGCTGC AGCTCCAGCCTCCCACTCCGAGTGCTGTCCCTAGAACTAAGGTCTGTGCGGCTCCACGGA ACACTGCTACACAATTGCATGGCGAACCTCACTTCGCTGGTGAGGTTGGATCTTTCAGGC AACCATATTTCCGGAACCATACCTGAGGAGGTGGCCACGCTTCCAGGCCTCCAGACTCTG ATGCTTGCCGGCAACATCCTTTCAGGTAGCATCCCTCCGTCACTGGGTGTAGCATCACCT TCTCTTAGGTATGTTAATCTTGCAGGAAATAATCTTAGCGGAGTTATTCCTGATTCCTTA CCCAAAGCTCCATCGCTTCGTGTGCTGAACCTGTCCATGAATATCCTAGCGGGAATGATC CCAGTTACCATATTCAACAGTAATTCATCCAAACTTGTCACAGTGGACCTCCAGCTGAAT CATCTTACTGGACCCATTCCTTCCCTCCAAAACCCCACGTCTCTGCAATTTCTTGGCCTT ACTGGAAACGTTCTTTCTGGAAGGGTTCCACCATCCTTAGGAAATGTTTCATCCTTAAAC ACCATCCTGCTGGCAGAGAACAACTTGTCAGGACCGATTCCAGAAGCCTTAGGCCATATC CTGAACTTGAACATTCTAGATCTAAGTGAAAACATGTTATCAGGGAATGTCCCTCGTTTC CAGAAAGCCACCTCTCTGCAACTTCTTGGCCTTAATGGAAATATTCTTTCTGGAAGGATT CCAGCATCCTTAGGAAATGTTTCATCCTTAAACACCATCCGGCTGGCATACAACACCTTG TCAGGACCGATTCCAGAAGCCTTAGGTCATATCCTGAACTTGAACATTCTAGATCTAAGT GAAAACATGTTATCAGGGAATGTCCCAGCGGCGATATACAATGTCTCATCATTCAGATAT CTTCACTTGGGCAACAATTTGCTTGATGGGCAGATACTTCCTAACACTGGCCACTCACTC CCAAACCTCATGTCACTGATCATGAGAGGCAACAGATTCACTGGAGTGGTCCCGTCTTCA CTGGCCAACATGTCAAAGCTCCAAGAAATAGATCTCTCAAGAAATTTACTAAACGGCTCG GTTCCATCTCTAGGATCCCTGAGCAACTTGAGTCGACTGATTCTTGGAAGCAACATGCTG CAGGCCGAAGACTGGGTGTTTCTGACCTCTCTGACAAATTGCAGCCAACTATCAATGTTA TCCATAGACGGGAATTCTCTGGAAGGAAGCCTTCCAGAATCAGTCGGCAATCTTTCGAGA AACCTGGAACGGCTTAACTTTAGAGGTAACTGGATTTCAGGAACGATACCAGCTGCGATA GGCAACCTTGTGAATCTCACTCTGCTTGCCATGGACCACAACATGCTTTCAGGAAGCATT CCCTCAACTATTGGTAATCTAAAAAACTTGGTTGTCCTAGCACTGTCCACGAATAGATTG TCAGGTGAAATGCCATCGACAATTGGCGATCTCCCTCAGCTGAACCAGCTTTACATGGAC GATAACTTGTTGTCCGGAAACATACCGGCAAGTCTAGGACAGTGCAAAAGGTTGAATATG TTAAACTTATCAGTCAATAACCTTGATGGATCCATACCAAGTGAAATCCTGAACATTTCT TCGCTTTCTTTAGGGTTGGACTTGTCAAACAACAACCTTAATGGAACAATACCGCCACAG ATCGGAAACCTGATCAATCTCGGCCTGCTGAATGTTTCCAGCAACAGATTATCTGGTGAG ATACCAACTGAACTTGGACAGTGTGTTTTATTGTCATACCTTCAGATGGAAAGCAACATG TTTAGTGGGATTATTCCTCAGTCTCTCAGTGAACTAAAGGGCATAGAGCAGATGGATCTC TCTGAAAACAACTTGTCAGGTCAAATTCCAGAATTCTTCGAGAGCTTCAGGACCTTATAT CACCTTGATCTGTCACACAACAAACTGGTAGGACCAATTCCAACCAGTGGTATCTTCACA AATCCAAATGCTGTCATGTTGGACGATAACTTAGGATTATGTCAACAAAGTACCATATTT GCATTGCCGATCTGCCCCACCACATCATCAGTAACAAAAAGGAAAAACGATGCACGCCTG CTGCTCATAGTAGCCCCACCGGCTACTATCGCTTTGTTGTCATTTTTATGTGTTCTTGCC ACTGTTACGAAAGGAATAGCAACCCAACCACCTGAAAGCTTCAGAGAGACAATGAAGAAG GTGTCATATGGGGACATTCTTAAAGCCACAAATTGGTTCTCTCCAGTCAACAAGATTAGC TCAAGTCATACGGCATCAGTATACGTTGGCCGCTTTGAGTTTGATACAGACCTTGTTGCC ATCAAGGTATTTCATCTCGACGAGCAAGGTTCCCTTAATGGCTTTTTCAATGAGTGTGAA GTCTTAAAGCAGACCCGCCATCGCAATCTAATTCAAGCAATCACCTTGTGCTCGACAGTA GATTTTGAGAACAACGAATTCAAAGCTCTAGTATATGAGTTCATGGCAAATGGTAGCCTA GACATGTGGATACACCCAAGTCTGCACCAAGGTAGACGAAGGAGGGTGCTAAGTTTAGGT CAACGAATTAGTATCGCCGCAGATGTGGCTTCTGCTCTTGACTATCTGCACAACCAGTTG ATACCTCCATTGATCCACTGTGATTTAAAGCCTAGCAATGTTCTTTTGGATTATGACATG ACCTCACGCCTTGGTGACTTTGGGTCAGCAAAGTTTCTCTCTTCAAGTCTTACTAGCAGC AGTCCAGAAGGCTTTGTTGGCGCCTCAGGAACAATTGGGTATATTGCACCTGAGTATGGA ATGGGATGCAAAATCTCAACCGATGCTGATGTTTATGGTTTTGGAGTGCTCCTGCTAGAA TTGCTCACAGCAAAGCGACCAACTGACGAAATATTTGGCAACGACCTCAGCCTTCACAAG TATGTGGATATAGCATTCCCTGATAAAATCGATGAGATTTTAGACCCGCAGATGCAAAAT GAGGGCGAAGTTGTTTGTAATCTACGCATGCAAAACTATCTCATACCACTGGTTGAAATT GGCCTGATGTGCTCCATGGAATCACCAAAAGATAGACCAGGAATGCAAGCTGTTTGTGCC AAAATTATTGCCATCCAGGAAGCGTTTATTCAAACCTTTTGA

Peptide Sequence

PEP ID	Zm00001d044656_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:234154462:234158359:1 gene:Zm00001d044656 transcript:Zm00001d044656_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat protein kinase family protein
Sequence	MDPSPRQCHAHTLLLLLCTSVLVFLSNNSAFSSAQPGNRSEADRQALLCFKSGISDDPRR VLTSWSADSLSFCGWRGVSCSSSLPLRVLSLELRSVRLHGTLLHNCMANLTSLVRLDLSG NHISGTIPEEVATLPGLQTLMLAGNILSGSIPPSLGVASPSLRYVNLAGNNLSGVIPDSL PKAPSLRVLNLSMNILAGMIPVTIFNSNSSKLVTVDLQLNHLTGPIPSLQNPTSLQFLGL TGNVLSGRVPPSLGNVSSLNTILLAENNLSGPIPEALGHILNLNILDLSENMLSGNVPRF QKATSLQLLGLNGNILSGRIPASLGNVSSLNTIRLAYNTLSGPIPEALGHILNLNILDLS ENMLSGNVPAAIYNVSSFRYLHLGNNLLDGQILPNTGHSLPNLMSLIMRGNRFTGVVPSS LANMSKLQEIDLSRNLLNGSVPSLGSLSNLSRLILGSNMLQAEDWVFLTSLTNCSQLSML SIDGNSLEGSLPESVGNLSRNLERLNFRGNWISGTIPAAIGNLVNLTLLAMDHNMLSGSI PSTIGNLKNLVVLALSTNRLSGEMPSTIGDLPQLNQLYMDDNLLSGNIPASLGQCKRLNM LNLSVNNLDGSIPSEILNISSLSLGLDLSNNNLNGTIPPQIGNLINLGLLNVSSNRLSGE IPTELGQCVLLSYLQMESNMFSGIIPQSLSELKGIEQMDLSENNLSGQIPEFFESFRTLY HLDLSHNKLVGPIPTSGIFTNPNAVMLDDNLGLCQQSTIFALPICPTTSSVTKRKNDARL LLIVAPPATIALLSFLCVLATVTKGIATQPPESFRETMKKVSYGDILKATNWFSPVNKIS SSHTASVYVGRFEFDTDLVAIKVFHLDEQGSLNGFFNECEVLKQTRHRNLIQAITLCSTV DFENNEFKALVYEFMANGSLDMWIHPSLHQGRRRRVLSLGQRISIAADVASALDYLHNQL IPPLIHCDLKPSNVLLDYDMTSRLGDFGSAKFLSSSLTSSSPEGFVGASGTIGYIAPEYG MGCKISTDADVYGFGVLLLELLTAKRPTDEIFGNDLSLHKYVDIAFPDKIDEILDPQMQN EGEVVCNLRMQNYLIPLVEIGLMCSMESPKDRPGMQAVCAKIIAIQEAFIQTF

Transcript Sequence

Transcript ID	Zm00001d044656_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:234154462:234158359:1 gene:Zm00001d044656 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat protein kinase family protein
Sequence	ATGGATCCATCTCCCCGCCAATGTCATGCACACACACTCCTCCTCCTCCTGTGCACCAGC GTCCTCGTTTTCCTCTCAAACAACTCAGCGTTCTCGTCGGCACAGCCCGGCAACAGGTCA GAGGCTGACCGCCAAGCCCTGCTCTGCTTCAAATCCGGCATCTCCGACGACCCTCGCCGC GTCCTCACGTCATGGAGCGCCGACTCGCTCAGCTTCTGCGGCTGGCGAGGGGTCAGCTGC AGCTCCAGCCTCCCACTCCGAGTGCTGTCCCTAGAACTAAGGTCTGTGCGGCTCCACGGA ACACTGCTACACAATTGCATGGCGAACCTCACTTCGCTGGTGAGGTTGGATCTTTCAGGC AACCATATTTCCGGAACCATACCTGAGGAGGTGGCCACGCTTCCAGGCCTCCAGACTCTG ATGCTTGCCGGCAACATCCTTTCAGGTAGCATCCCTCCGTCACTGGGTGTAGCATCACCT TCTCTTAGGTATGTTAATCTTGCAGGAAATAATCTTAGCGGAGTTATTCCTGATTCCTTA CCCAAAGCTCCATCGCTTCGTGTGCTGAACCTGTCCATGAATATCCTAGCGGGAATGATC CCAGTTACCATATTCAACAGTAATTCATCCAAACTTGTCACAGTGGACCTCCAGCTGAAT CATCTTACTGGACCCATTCCTTCCCTCCAAAACCCCACGTCTCTGCAATTTCTTGGCCTT ACTGGAAACGTTCTTTCTGGAAGGGTTCCACCATCCTTAGGAAATGTTTCATCCTTAAAC ACCATCCTGCTGGCAGAGAACAACTTGTCAGGACCGATTCCAGAAGCCTTAGGCCATATC CTGAACTTGAACATTCTAGATCTAAGTGAAAACATGTTATCAGGGAATGTCCCTCGTTTC CAGAAAGCCACCTCTCTGCAACTTCTTGGCCTTAATGGAAATATTCTTTCTGGAAGGATT CCAGCATCCTTAGGAAATGTTTCATCCTTAAACACCATCCGGCTGGCATACAACACCTTG TCAGGACCGATTCCAGAAGCCTTAGGTCATATCCTGAACTTGAACATTCTAGATCTAAGT GAAAACATGTTATCAGGGAATGTCCCAGCGGCGATATACAATGTCTCATCATTCAGATAT CTTCACTTGGGCAACAATTTGCTTGATGGGCAGATACTTCCTAACACTGGCCACTCACTC CCAAACCTCATGTCACTGATCATGAGAGGCAACAGATTCACTGGAGTGGTCCCGTCTTCA CTGGCCAACATGTCAAAGCTCCAAGAAATAGATCTCTCAAGAAATTTACTAAACGGCTCG GTTCCATCTCTAGGATCCCTGAGCAACTTGAGTCGACTGATTCTTGGAAGCAACATGCTG CAGGCCGAAGACTGGGTGTTTCTGACCTCTCTGACAAATTGCAGCCAACTATCAATGTTA TCCATAGACGGGAATTCTCTGGAAGGAAGCCTTCCAGAATCAGTCGGCAATCTTTCGAGA AACCTGGAACGGCTTAACTTTAGAGGTAACTGGATTTCAGGAACGATACCAGCTGCGATA GGCAACCTTGTGAATCTCACTCTGCTTGCCATGGACCACAACATGCTTTCAGGAAGCATT CCCTCAACTATTGGTAATCTAAAAAACTTGGTTGTCCTAGCACTGTCCACGAATAGATTG TCAGGTGAAATGCCATCGACAATTGGCGATCTCCCTCAGCTGAACCAGCTTTACATGGAC GATAACTTGTTGTCCGGAAACATACCGGCAAGTCTAGGACAGTGCAAAAGGTTGAATATG TTAAACTTATCAGTCAATAACCTTGATGGATCCATACCAAGTGAAATCCTGAACATTTCT TCGCTTTCTTTAGGGTTGGACTTGTCAAACAACAACCTTAATGGAACAATACCGCCACAG ATCGGAAACCTGATCAATCTCGGCCTGCTGAATGTTTCCAGCAACAGATTATCTGGTGAG ATACCAACTGAACTTGGACAGTGTGTTTTATTGTCATACCTTCAGATGGAAAGCAACATG TTTAGTGGGATTATTCCTCAGTCTCTCAGTGAACTAAAGGGCATAGAGCAGATGGATCTC TCTGAAAACAACTTGTCAGGTCAAATTCCAGAATTCTTCGAGAGCTTCAGGACCTTATAT CACCTTGATCTGTCACACAACAAACTGGTAGGACCAATTCCAACCAGTGGTATCTTCACA AATCCAAATGCTGTCATGTTGGACGATAACTTAGGATTATGTCAACAAAGTACCATATTT GCATTGCCGATCTGCCCCACCACATCATCAGTAACAAAAAGGAAAAACGATGCACGCCTG CTGCTCATAGTAGCCCCACCGGCTACTATCGCTTTGTTGTCATTTTTATGTGTTCTTGCC ACTGTTACGAAAGGAATAGCAACCCAACCACCTGAAAGCTTCAGAGAGACAATGAAGAAG GTGTCATATGGGGACATTCTTAAAGCCACAAATTGGTTCTCTCCAGTCAACAAGATTAGC TCAAGTCATACGGCATCAGTATACGTTGGCCGCTTTGAGTTTGATACAGACCTTGTTGCC ATCAAGGTATTTCATCTCGACGAGCAAGGTTCCCTTAATGGCTTTTTCAATGAGTGTGAA GTCTTAAAGCAGACCCGCCATCGCAATCTAATTCAAGCAATCACCTTGTGCTCGACAGTA GATTTTGAGAACAACGAATTCAAAGCTCTAGTATATGAGTTCATGGCAAATGGTAGCCTA GACATGTGGATACACCCAAGTCTGCACCAAGGTAGACGAAGGAGGGTGCTAAGTTTAGGT CAACGAATTAGTATCGCCGCAGATGTGGCTTCTGCTCTTGACTATCTGCACAACCAGTTG ATACCTCCATTGATCCACTGTGATTTAAAGCCTAGCAATGTTCTTTTGGATTATGACATG ACCTCACGCCTTGGTGACTTTGGGTCAGCAAAGTTTCTCTCTTCAAGTCTTACTAGCAGC AGTCCAGAAGGCTTTGTTGGCGCCTCAGGAACAATTGGGTATATTGCACCTGAGTATGGA ATGGGATGCAAAATCTCAACCGATGCTGATGTTTATGGTTTTGGAGTGCTCCTGCTAGAA TTGCTCACAGCAAAGCGACCAACTGACGAAATATTTGGCAACGACCTCAGCCTTCACAAG TATGTGGATATAGCATTCCCTGATAAAATCGATGAGATTTTAGACCCGCAGATGCAAAAT GAGGGCGAAGTTGTTTGTAATCTACGCATGCAAAACTATCTCATACCACTGGTTGAAATT GGCCTGATGTGCTCCATGGAATCACCAAAAGATAGACCAGGAATGCAAGCTGTTTGTGCC AAAATTATTGCCATCCAGGAAGCGTTTATTCAAACCTTTTGATAAAAGGCAAGGTGACAA TAAAGATGCATGGAATTTTGGGAAGGCATAATGTAAGAAGGCCAGAGGCGAGCATTATTC AAACCATCTGGAGAAAAGTACCATGCAGTTTAACAAGAATGGAGCTCAACCTGCTAAACA GAACTGGGATAAAGTACGGCGAAAGATTTAAGGTGGGCAGCTAAATTTCTTATTCTCCAG CAAAAAGTTGAAAGACTGAGGCTAGGCGATGGTCAGTTAACTTGCCAAACACTGTTGAGA TTGCGATATGTAGAATCATTTTTATAGTTACTTGTTTTTCTCATCCAGTTGTGGCTTCCA AGGAATGAAGAACTGTCTAACGAATCTATATTTTTTCTGCAAATTGCATTGTATGATGTT CC