Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d044605_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:233291107:233293518:-1 gene:Zm00001d044605 gene_biotype:protein_coding transcript_biotype:protein_coding description:Omega-3 fatty acid desaturase

Sequence

ATGCAGATGACGGCGGATCAGGAATCGGCGGCCAAGGCGACGGAGGACGACACGATGAGC
GGCCGGCGGCGGGTGGACGACGACCACGACCACGACGTCGTCTTCGACGCCGGGAAACCG
CCGCCGTTCCGCATCGGCGACGTGCGGGCGGCGGTGCCGGAGCACTGCTGGCGCAAGAAC
CCCTGGCGGTCGCTGTGGTACGTGGCGCGGGACGTGGCGGTGGTGGCGGCGCTGGGCGCG
GCGGCGGCGGGCATGGACAGTTGGGCGGTGTGGCCGCTGTACTGGGCGGCGCAGGGGACC
ATGTTCTGGGCGCTCTTCGTGCTGGGACACGACTGTGGCCATGGCAGCTTCTCGGACAGC
GCGACGCTCAACAGCGTCGTGGGCCATCTCCTTCACTCCTTCATCCTCGTCCCTTACCAT
GGATGGAGGATCAGCCACAGAACACACCATCAGAACCACGGCCACATCCACAGGGACGAG
TCATGGCACCCGATCACGGAGAAGCTGTACCGGCAACTAGAGCCACGCACCAAGAAGCTG
AGATTCACGGTGCCCTTCCCGCTGCTCGCATTCCCCGTCTACCTCTTGTACAGGAGCCCC
GGCAAGTCGGGCTCCCACTTCCTTCCCAGCAGCGACCTGTTCAGCCCCAAGGAGAAGAGC
GACGTCATGGTGTCAACCACCTGCTGGTGCATCATGCTCGCCTCCCTCCTCGCCATGGCG
TGCGCGTTCGGCCCACTCCAGGTGCTCAAGATGTACGGCATCCCATACCTGGTGTTCGTG
ATGTGGCTTGACCTGGTGACGTACCTGCACCACCATGGGCACCATCAGCTTCCTCTCCCC
TGGTACCGCGGCCAGGAGTGGAGCTACCTGCGCGGCGGCCTCACCACGGTGGACAGGGAC
TACGGCTGGATCAACAACGTCCACCACGACATCGGCACCCACGTCATTCATCACCTCTTC
CCGCAGATCCCGCACTACCATCTCGTCGAAGCTACCAAGGCAGCCAAGCCGGTGCTGGGG
CGATACTACCGGGAGCCGCACAAGTCAGGGCCGCTTCCACTTCACCTCCTCGTCGTGCTC
CTCAGGAGCCTCAGAGTCGACCACTTCGTCAGCGACCACGGGGATGTCGTCTACTACCAA
ACCGACCATGACTTGAACACTAGCAGTGCTCATCGCTGGGCCAACCAAAACCACCATAAG
CAAAAATAA

Peptide Sequence

PEP ID

Zm00001d044605_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:233291107:233293518:-1 gene:Zm00001d044605 transcript:Zm00001d044605_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Omega-3 fatty acid desaturase

Sequence

MQMTADQESAAKATEDDTMSGRRRVDDDHDHDVVFDAGKPPPFRIGDVRAAVPEHCWRKN
PWRSLWYVARDVAVVAALGAAAAGMDSWAVWPLYWAAQGTMFWALFVLGHDCGHGSFSDS
ATLNSVVGHLLHSFILVPYHGWRISHRTHHQNHGHIHRDESWHPITEKLYRQLEPRTKKL
RFTVPFPLLAFPVYLLYRSPGKSGSHFLPSSDLFSPKEKSDVMVSTTCWCIMLASLLAMA
CAFGPLQVLKMYGIPYLVFVMWLDLVTYLHHHGHHQLPLPWYRGQEWSYLRGGLTTVDRD
YGWINNVHHDIGTHVIHHLFPQIPHYHLVEATKAAKPVLGRYYREPHKSGPLPLHLLVVL
LRSLRVDHFVSDHGDVVYYQTDHDLNTSSAHRWANQNHHKQK

Transcript Sequence

Transcript ID

Zm00001d044605_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:233291107:233293518:-1 gene:Zm00001d044605 gene_biotype:protein_coding transcript_biotype:protein_coding description:Omega-3 fatty acid desaturase

Sequence

GCCGCGCCTGGAGACGGCACGCGCACACACACACACACACACACACATATTTTGAGAACG
GAGAGGGAGCGAGCCTCTTACGTTACGCCTTCCGTTCACGTCCTAGCAAATCAAACCAAT
TCCATCTCTCTCTTTCTCTCTCTCTCCCCGATCCATCTTGTCCAACTCCTCGATCGGCCG
TTCATATGTTTATGCGTTAGCAAACCAATTCCCATTCCATTACTCCGGCGGCGGCCGCAC
CACCGCCAAAAACCAATGCAGATGACGGCGGATCAGGAATCGGCGGCCAAGGCGACGGAG
GACGACACGATGAGCGGCCGGCGGCGGGTGGACGACGACCACGACCACGACGTCGTCTTC
GACGCCGGGAAACCGCCGCCGTTCCGCATCGGCGACGTGCGGGCGGCGGTGCCGGAGCAC
TGCTGGCGCAAGAACCCCTGGCGGTCGCTGTGGTACGTGGCGCGGGACGTGGCGGTGGTG
GCGGCGCTGGGCGCGGCGGCGGCGGGCATGGACAGTTGGGCGGTGTGGCCGCTGTACTGG
GCGGCGCAGGGGACCATGTTCTGGGCGCTCTTCGTGCTGGGACACGACTGTGGCCATGGC
AGCTTCTCGGACAGCGCGACGCTCAACAGCGTCGTGGGCCATCTCCTTCACTCCTTCATC
CTCGTCCCTTACCATGGATGGAGGATCAGCCACAGAACACACCATCAGAACCACGGCCAC
ATCCACAGGGACGAGTCATGGCACCCGATCACGGAGAAGCTGTACCGGCAACTAGAGCCA
CGCACCAAGAAGCTGAGATTCACGGTGCCCTTCCCGCTGCTCGCATTCCCCGTCTACCTC
TTGTACAGGAGCCCCGGCAAGTCGGGCTCCCACTTCCTTCCCAGCAGCGACCTGTTCAGC
CCCAAGGAGAAGAGCGACGTCATGGTGTCAACCACCTGCTGGTGCATCATGCTCGCCTCC
CTCCTCGCCATGGCGTGCGCGTTCGGCCCACTCCAGGTGCTCAAGATGTACGGCATCCCA
TACCTGGTGTTCGTGATGTGGCTTGACCTGGTGACGTACCTGCACCACCATGGGCACCAT
CAGCTTCCTCTCCCCTGGTACCGCGGCCAGGAGTGGAGCTACCTGCGCGGCGGCCTCACC
ACGGTGGACAGGGACTACGGCTGGATCAACAACGTCCACCACGACATCGGCACCCACGTC
ATTCATCACCTCTTCCCGCAGATCCCGCACTACCATCTCGTCGAAGCTACCAAGGCAGCC
AAGCCGGTGCTGGGGCGATACTACCGGGAGCCGCACAAGTCAGGGCCGCTTCCACTTCAC
CTCCTCGTCGTGCTCCTCAGGAGCCTCAGAGTCGACCACTTCGTCAGCGACCACGGGGAT
GTCGTCTACTACCAAACCGACCATGACTTGAACACTAGCAGTGCTCATCGCTGGGCCAAC
CAAAACCACCATAAGCAAAAATAATGGTTTCTCAAACACAGAGACGGCCTGATGGTTGCT
GTTGTTATTGCTCCAAGGACTCACAGTACAATATATAGGCATGCGTATGAGAAAGCCAAA
TAATTAAAGAGAAGGGAGGGATCCTCTAGCTGAAGCAATCAATTAATTACAGTATCCCAC
TAGATCGAGTTTGCTAAGCATTACTCCTACTATATACAATATGTACTGTTGCTTGTATTA
ATTAGCTAGATGTTGTGTTGGAGCCTTGGATGATGAAACTAAAGGATGAGCCACTGAAAT
TTGTACCATTTGTTCGGAACTTCATTTATATGGCTACTGATGATATATCACATCTACACA
GTTTTAGGATGATCACATCTAGAGTAAAATGCATAATCAATCT