Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d044593_T009
CDS Infomation	cds chromosome:B73_RefGen_v4:3:232900805:232904935:-1 gene:Zm00001d044593 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear pore complex protein NUP98A
Sequence	ATGTCATATCTCTGCTCTGCACATGTTATAGGGTCTTTGTTCGGACAGAAGCCAAGTTTT GGGGGTTTTGGATCATCTCCTAGCCAGTCAAGTCCTTTTGGTAGCACGTTCCAGCAAACA CAACCAACATTTGGAACGACGCCGGCATTTGGTACCATGACTACTCCTGCATTTGGTACA AGTACACCAGCCTTTGGCACCACAACTGCACCAGCCTTCGGTGCCACGACTACCCCAGCA TTTGGTTCAACATCAACATCTTTATTCGGTGCTTCTAGCACCCCAGTGTTTGGTTCTACA GCCTTTGGCACATCTGCTACTGGTTTTGGAACTTCAGGGACTACAGCATTCGGTGTGAGT AGTACTACTACAGGTTTTGGATCTTCAAGCACACCTTCATTTGGCACATCAGCTAGCGTG TTCGGTTTTGGTTCTTCACCATCTTTTGGACAAACAACAGTTTCTTCTGGCAGCACTCCC TTTGGAACAACTCCTTCACCCTTTGGTGCACCAGTTCCTGCATTTGGCTCGCAGACAGCA GCACCAGCTTTTGGACAACCTCAGTTTGCTAATCAAGCTGGAGGAACCAGAATAAAACCT TATTCTCAAACACCAGATGTTGACAGTGCTACTAGTGGTACTCAGCCTGCTGCAAAACTT GATTCCATATCGGCAATGCCTGAATACAAAGACAAGAGTCATGAAGAATTGAGGTGGGAA GACTACCAGCGTGGAGATAAGGGTGGACCAAACACTTCTGGAACTCAAGCAGTGGCACCT AGCTTTCCGTCACTAATACAACAGAATGCTCCAAACCCATTTTCGACAAGCAATCCATTT TCAACAAACAATCCATTTGCTCCTAAGCCTGCTCCAACTATTACTTCACCATTCAACACC TCATTTAACAATGCATCAGTTACAAGTTCGAGCCCATTCACATCATCCCCTAGTACCACA ATGTTTGGGCAAACAGGTGTTTCTACACTTTCAGCAAGTAATTCGCCATCATTGTTTGGA AATACCAATCCAGCTCCTGTTACATCATCATTATTTGCCACATCAGTGACAAATAATCCA AGTCCATTCGGCACTGGCTCATTATTCGCTAACACTCAATCAGCCCCATTATTTCCCTCA GCATTTGCTCAACCGACATCAAGTACACCGGCTTTCTCCTCTGGCAGCCTATTTGGCTCA ACTAATCCGGGCAGTCTGTTTAGCAGCAGCGGTCCTTCACTTTTTTCAACACCAACATTT CAACCATCGGCCCCTGCTCAAACTTCGAACTTATTCTCCTTCCAACCTCCAATTCAACCA GCAGCTTCTACAGGTGGATTCCCTGGTTTTTCCAATACTACAAACCAAGCCTTGATGGGA CAGCCGTATGATCTTCTGCTACTTTTCAAATGCACACCATTATTCCTTTCCTATTTAGTA ATTTCTTTTGATGTTTTAAAACGCTGA

Peptide Sequence

PEP ID	Zm00001d044593_P009
PEP Infomation	pep chromosome:B73_RefGen_v4:3:232900805:232904935:-1 gene:Zm00001d044593 transcript:Zm00001d044593_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear pore complex protein NUP98A
Sequence	MSYLCSAHVIGSLFGQKPSFGGFGSSPSQSSPFGSTFQQTQPTFGTTPAFGTMTTPAFGT STPAFGTTTAPAFGATTTPAFGSTSTSLFGASSTPVFGSTAFGTSATGFGTSGTTAFGVS STTTGFGSSSTPSFGTSASVFGFGSSPSFGQTTVSSGSTPFGTTPSPFGAPVPAFGSQTA APAFGQPQFANQAGGTRIKPYSQTPDVDSATSGTQPAAKLDSISAMPEYKDKSHEELRWE DYQRGDKGGPNTSGTQAVAPSFPSLIQQNAPNPFSTSNPFSTNNPFAPKPAPTITSPFNT SFNNASVTSSSPFTSSPSTTMFGQTGVSTLSASNSPSLFGNTNPAPVTSSLFATSVTNNP SPFGTGSLFANTQSAPLFPSAFAQPTSSTPAFSSGSLFGSTNPGSLFSSSGPSLFSTPTF QPSAPAQTSNLFSFQPPIQPAASTGGFPGFSNTTNQALMGQPYDLLLLFKCTPLFLSYLV ISFDVLKR

Transcript Sequence

Transcript ID	Zm00001d044593_T009
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:232900805:232904935:-1 gene:Zm00001d044593 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear pore complex protein NUP98A
Sequence	GCTACATTTGTTTTCAGTAGCTACTCATGCAGAATTATGCTAGTTCATGTTTTACTAGGT TGGCTTAACATGATCTGCTGTATTATTTGTGATGTCATATCTCTGCTCTGCACATGTTAT AGGGTCTTTGTTCGGACAGAAGCCAAGTTTTGGGGGTTTTGGATCATCTCCTAGCCAGTC AAGTCCTTTTGGTAGCACGTTCCAGCAAACACAACCAACATTTGGAACGACGCCGGCATT TGGTACCATGACTACTCCTGCATTTGGTACAAGTACACCAGCCTTTGGCACCACAACTGC ACCAGCCTTCGGTGCCACGACTACCCCAGCATTTGGTTCAACATCAACATCTTTATTCGG TGCTTCTAGCACCCCAGTGTTTGGTTCTACAGCCTTTGGCACATCTGCTACTGGTTTTGG AACTTCAGGGACTACAGCATTCGGTGTGAGTAGTACTACTACAGGTTTTGGATCTTCAAG CACACCTTCATTTGGCACATCAGCTAGCGTGTTCGGTTTTGGTTCTTCACCATCTTTTGG ACAAACAACAGTTTCTTCTGGCAGCACTCCCTTTGGAACAACTCCTTCACCCTTTGGTGC ACCAGTTCCTGCATTTGGCTCGCAGACAGCAGCACCAGCTTTTGGACAACCTCAGTTTGC TAATCAAGCTGGAGGAACCAGAATAAAACCTTATTCTCAAACACCAGATGTTGACAGTGC TACTAGTGGTACTCAGCCTGCTGCAAAACTTGATTCCATATCGGCAATGCCTGAATACAA AGACAAGAGTCATGAAGAATTGAGGTGGGAAGACTACCAGCGTGGAGATAAGGGTGGACC AAACACTTCTGGAACTCAAGCAGTGGCACCTAGCTTTCCGTCACTAATACAACAGAATGC TCCAAACCCATTTTCGACAAGCAATCCATTTTCAACAAACAATCCATTTGCTCCTAAGCC TGCTCCAACTATTACTTCACCATTCAACACCTCATTTAACAATGCATCAGTTACAAGTTC GAGCCCATTCACATCATCCCCTAGTACCACAATGTTTGGGCAAACAGGTGTTTCTACACT TTCAGCAAGTAATTCGCCATCATTGTTTGGAAATACCAATCCAGCTCCTGTTACATCATC ATTATTTGCCACATCAGTGACAAATAATCCAAGTCCATTCGGCACTGGCTCATTATTCGC TAACACTCAATCAGCCCCATTATTTCCCTCAGCATTTGCTCAACCGACATCAAGTACACC GGCTTTCTCCTCTGGCAGCCTATTTGGCTCAACTAATCCGGGCAGTCTGTTTAGCAGCAG CGGTCCTTCACTTTTTTCAACACCAACATTTCAACCATCGGCCCCTGCTCAAACTTCGAA CTTATTCTCCTTCCAACCTCCAATTCAACCAGCAGCTTCTACAGGTGGATTCCCTGGTTT TTCCAATACTACAAACCAAGCCTTGATGGGACAGCCGTATGATCTTCTGCTACTTTTCAA ATGCACACCATTATTCCTTTCCTATTTAGTAATTTCTTTTGATGTTTTAAAACGCTGATG AGTTATAACAAGGTGAAGGAAAAACAATATTATGATCAGTCTAATGTGGAGAATGGTGTA GGCAAAGAAGGGAAAAAACCTTGATGGTTCATGGAGACTAGCTTATATTTGATGCCATGA GACTGCTGGATTGTTATTTTATATCTGTAGTCTAAGAGCATGGTTTTGGCATAGATCATA ATTCAGAAATGAGTTTTTGGCAATGATTCCTGTTTTTTTTTCTTTTAACATGGTCTATCC TGCTGCATTTTTACCCAGAACTCCTACCCTGTCCAGTATGGTCATGCAGCCTGCTCCTGT TTCAAATCCATTTGGGATGCTTCCAGCAATGCCTCACATGTCCATTGGAAATGGTGGATC TTCACCTTCAGTTCAATATGGAATATCAAGTTTGCCGGTTGTGGAGAAGCTTCTTCCAAG TAGATCATTGTCCATGGCGTTTCCTAGGCATTTGGCACAGAGAAGGATAAAACTGCTGCC GAGAAAATATAATCCAATATCTGATGGCAAGGTTCCATTCTTTGCTGATGATGAAGAATC TCCAGCAACACCAAAGGCAGACGCTTTTTTTGTCCCTAGAGAGAACCCAAGGAATCTGGT AATTCGTCCAATTGAGCAGTGGCCTTCGCGGAGAGAAACTGACCGACAATTGACTGTGAA GAATGCTACTGATTTGAACAAATATGAAGATGCTTCCATTGAAAGTGAGCGTGGTAAGTC TGCCTCTGCCATGTCACCAAGCAGCAGGCCTCCTGCAGTGGAAAATGACAATCAGCATGA GGCTAGGGCCATGGCTCAACATGGGAATGGGAATGCTACTTCAGTCGAGAGGTTATTGCC TAAGCTTCCACGTGCAGATTACTTCACAGAGCCTAGTATAGAGGAGCTTGCGGCCAAAGA ACGTGCGGAGGCAGGCTACTGCGGTCGAGTGAGGGACTTTGTTGTGGGGCGACATGGCTA CGGCAGCATCATTTTTCTTGGGGAGACGGACGTGAGGTGCCTGGATCTGGAGTCAATAGT GGAGTTTAACAACCGGGAGGTGGTTGTTTACAAGGACGACAGCAAGAAGCCCCCTGTGGG TGAGGGGCTGAACAAGGCTGCGGAGGTGACTCTACTGAACATCAAGTGCGTAAATAAGAA GACTGGGGAGGAGTACTGTGAGGGGACAAGGGTGGAGAGGTACAGGGAGATGCTGATGAA GAAGGCGGAGGAGCAGGGCGCGGAGTTTGTGTCCTTTGATGCTGCCAAGGGAGAGTGGAA GTTCAGGGTGAAGCATTTCAGCGCCTATGGGCTCCCTTGTTGTTAAGTATTCTGTTTGTT TTGATGGAGCAGTGATAACTAAGTTGCACGCTTTACGCTCTTGTCAAATAGTATCATGCT TGATTCTGTTGTGCTGCTTTGTACAATGTTGCTGCTGTTAAAATGCTTGCAAATTGCACT GCTCTGCTGCTGAGAAC