Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d044585_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:3:232636644:232638021:1 gene:Zm00001d044585 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable pectinesterase 67
Sequence

ATGGCCCGGCCGCGCCTCCTCCTCACCTTCCTGCTCGCCGCGGCGGCCGTGCTGACCACG
GTGCCCGGCGTCGCGCTCGCCAAGTCGAAGCTCGCCAAGAAGAGCGACGACGTCGTGAAC
GGGCCCCTCCTGACCGAGAAGATCCAGGCGAAGAAGACGCTGATCGTGGGGCCGGACGAG
GAGTTCAAGACCGTGCAGTCCGCCATCGACGCGGTGCCCGCCGGAAACGCCGAGGGCAAA
GTTGTGATACCGGAGAACAAGCCCTTCATCTTCGTGAGGGGCAACGGCAAAGGCCGGACC
TCCATCTCCCACGAGTCCGCCTCTTCCGACAACGCCGAGTCCGCCGCGTTCACCGTGAAC
TCGGACAACGTCATCGTCTTCGGCGTCAGCTTCAGGAACAGCGCCCGCGTCGGCCTGGTG
AACGACCCGGAGATCCGTTCCGTGGCGGCGATGGTGGCCGGCGACAAGGTGGCCTTCTAC
CACTGCGCGTTCTACAGCCCCCACCACACCCTGTTCGACAGCGCCGGCCGCCACTACTAC
GAGAGCTGCTACATCCAGGGCAACATCGACTTCATCTTCGGCAGCGGCCAGTCCATCTTC
CAGTGCCCCGAGATCTTCGTGAGGCCTGACCGGCGGACGGAGATCCGCGGCTCCATCACC
GCGCAGGTGCGGCAGGAGGAGGACAGCAGCGGCTTCGTCTTCCTCAAGGGCAAGGTGTAC
GGCGTCGGGGAGGTGTACCTGGGCCGCGTCACCGCGCCCGACTCGCGCGTCATCTTCGCA
GACACCTACCTCTCCAAGACCATCCACCCGGCCGGCTGGACAACCATAGGCTACAGCGGC
AGCACCGACAAGGTGACGCTCGCCGAGTTCAACTGCACTGGGCCGGGCGCTGACGTGACG
AACCGCGTGCCATGGTCGCGGAGGTTCTCTCCCGACGACGCGGCCAAGTACCTCACCATC
GACTTCATCAACGGCAAGGACTGGCTGCCGGCGTACTACTACTGA

Peptide Sequence

PEP ID

Zm00001d044585_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:3:232636644:232638021:1 gene:Zm00001d044585 transcript:Zm00001d044585_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable pectinesterase 67
Sequence

MARPRLLLTFLLAAAAVLTTVPGVALAKSKLAKKSDDVVNGPLLTEKIQAKKTLIVGPDE
EFKTVQSAIDAVPAGNAEGKVVIPENKPFIFVRGNGKGRTSISHESASSDNAESAAFTVN
SDNVIVFGVSFRNSARVGLVNDPEIRSVAAMVAGDKVAFYHCAFYSPHHTLFDSAGRHYY
ESCYIQGNIDFIFGSGQSIFQCPEIFVRPDRRTEIRGSITAQVRQEEDSSGFVFLKGKVY
GVGEVYLGRVTAPDSRVIFADTYLSKTIHPAGWTTIGYSGSTDKVTLAEFNCTGPGADVT
NRVPWSRRFSPDDAAKYLTIDFINGKDWLPAYYY

Transcript Sequence

Transcript ID

Zm00001d044585_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:232636644:232638021:1 gene:Zm00001d044585 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable pectinesterase 67
Sequence

ATGGCCCGGCCGCGCCTCCTCCTCACCTTCCTGCTCGCCGCGGCGGCCGTGCTGACCACG
GTGCCCGGCGTCGCGCTCGCCAAGTCGAAGCTCGCCAAGAAGAGCGACGACGTCGTGAAC
GGGCCCCTCCTGACCGAGAAGATCCAGGCGAAGAAGACGCTGATCGTGGGGCCGGACGAG
GAGTTCAAGACCGTGCAGTCCGCCATCGACGCGGTGCCCGCCGGAAACGCCGAGGGCAAA
GTTGTGATACCGGAGAACAAGCCCTTCATCTTCGTGAGGGGCAACGGCAAAGGCCGGACC
TCCATCTCCCACGAGTCCGCCTCTTCCGACAACGCCGAGTCCGCCGCGTTCACCGTGAAC
TCGGACAACGTCATCGTCTTCGGCGTCAGCTTCAGGAACAGCGCCCGCGTCGGCCTGGTG
AACGACCCGGAGATCCGTTCCGTGGCGGCGATGGTGGCCGGCGACAAGGTGGCCTTCTAC
CACTGCGCGTTCTACAGCCCCCACCACACCCTGTTCGACAGCGCCGGCCGCCACTACTAC
GAGAGCTGCTACATCCAGGGCAACATCGACTTCATCTTCGGCAGCGGCCAGTCCATCTTC
CAGTGCCCCGAGATCTTCGTGAGGCCTGACCGGCGGACGGAGATCCGCGGCTCCATCACC
GCGCAGGTGCGGCAGGAGGAGGACAGCAGCGGCTTCGTCTTCCTCAAGGGCAAGGTGTAC
GGCGTCGGGGAGGTGTACCTGGGCCGCGTCACCGCGCCCGACTCGCGCGTCATCTTCGCA
GACACCTACCTCTCCAAGACCATCCACCCGGCCGGCTGGACAACCATAGGCTACAGCGGC
AGCACCGACAAGGTGACGCTCGCCGAGTTCAACTGCACTGGGCCGGGCGCTGACGTGACG
AACCGCGTGCCATGGTCGCGGAGGTTCTCTCCCGACGACGCGGCCAAGTACCTCACCATC
GACTTCATCAACGGCAAGGACTGGCTGCCGGCGTACTACTACTGA