Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d044578_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:232292247:232295663:1 gene:Zm00001d044578 gene_biotype:protein_coding transcript_biotype:protein_coding description:CONTAINS InterPro DOMAIN/s: RNAse P Rpr2/Rpp21 subunit (InterPro:IPR007175); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (sou /.../CBI BLink).
Sequence	ATGGGAAAGAAGATTCGCAACACCGATGGCACCTCGACGCCGGCCAGGCCCATGAATCAG GCCGTGTCGCTCCGCGAGGAGACCTCCGGGAGGACGCGCGTAGACGATGCCTCCCTGCTG AGGGTCAAGCATTTGCAGAGGCTAGCGGCGTGGGCGGGCCCGGAGGCCGGGGTGCGCCCG ATCGGCGCGCTGCTGGGGCGCCGCCTCGCCGCGAGCGCCGAGGCCGCCGGAGTACCCCTC AACGCCGCCACTTTCCTTTGCCAGAGGTGTGAGACAATCTTAAAGCCAGGCTTCAACTGC ACTGTCCGCATAAGGAACAAGAGAAATAAAGCAAAACGTCGGAAGAAATCAAACTGTTGT CAGAACAGTGTTTCCTATGCATGCCATTTCTGTGGAGATCAGAACCTAATATTGGGTAGT GGGAAGGGTGTTGTTCAGAGCCTGTTACTGTCAAGAGGGCATGCTACCATGAACTCATCC CATATAATTGTGAGAGGAAACGGTAGCAACACAAGAGCACATGATAAGAAAGAAGTGCTT GAGCTTTCTCAAGCAGCAATTTTGCAAGTGGAATCGTCATCTCTGTTGAGGCAGTCGACT ACTGAAAGTGACGAGCATGGCGAAAGGTTAAATTGTAATCTTGATGAACAGATGCGTGAA ACTAGCCATATTTTTCCTGAGAAGGTTAGGATATGTGAAGCTACTTTGCAAGCAGAACTT GCACCTGGTTCATCATTTGTCACGCCTCAGAAAATGAAACCACCGGTGGTGACTGTTGCA AAAGATTCAGCAGGACTACTCAAGACAGGAAGTGGCATGATTTCTGGCTCAGCCATTGAC GCCCTCTCAGGCTCCAGCAAGTCTGCCTCGAATGGCTCTAGAAATAATGTGAAATATGCA GCAAGAGATTCTTCTCAGGTTTCTGGCAGCTCAAGGAAGCGGGCAAGGAAGGGTTGGACA ACGCTGAAACAGATGGCTGAGAAGGATGAGCTCGAGAGGAAGGAGAAGATGGGGAATTTT GTAATCCCGTTCTTCATGCAGTAA

Peptide Sequence

PEP ID	Zm00001d044578_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:232292247:232295663:1 gene:Zm00001d044578 transcript:Zm00001d044578_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:CONTAINS InterPro DOMAIN/s: RNAse P Rpr2/Rpp21 subunit (InterPro:IPR007175); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (sou /.../CBI BLink).
Sequence	MGKKIRNTDGTSTPARPMNQAVSLREETSGRTRVDDASLLRVKHLQRLAAWAGPEAGVRP IGALLGRRLAASAEAAGVPLNAATFLCQRCETILKPGFNCTVRIRNKRNKAKRRKKSNCC QNSVSYACHFCGDQNLILGSGKGVVQSLLLSRGHATMNSSHIIVRGNGSNTRAHDKKEVL ELSQAAILQVESSSLLRQSTTESDEHGERLNCNLDEQMRETSHIFPEKVRICEATLQAEL APGSSFVTPQKMKPPVVTVAKDSAGLLKTGSGMISGSAIDALSGSSKSASNGSRNNVKYA ARDSSQVSGSSRKRARKGWTTLKQMAEKDELERKEKMGNFVIPFFMQ

Transcript Sequence

Transcript ID	Zm00001d044578_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:232292247:232295663:1 gene:Zm00001d044578 gene_biotype:protein_coding transcript_biotype:protein_coding description:CONTAINS InterPro DOMAIN/s: RNAse P Rpr2/Rpp21 subunit (InterPro:IPR007175); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (sou /.../CBI BLink).
Sequence	AACCGTTCTTGCTGACAGAGTACCCACAGGTCCTGCACCAGCGGCGGCATGGGAAAGAAG ATTCGCAACACCGATGGCACCTCGACGCCGGCCAGGCCCATGAATCAGGCCGTGTCGCTC CGCGAGGAGACCTCCGGGAGGACGCGCGTAGACGATGCCTCCCTGCTGAGGGTCAAGCAT TTGCAGAGGCTAGCGGCGTGGGCGGGCCCGGAGGCCGGGGTGCGCCCGATCGGCGCGCTG CTGGGGCGCCGCCTCGCCGCGAGCGCCGAGGCCGCCGGAGTACCCCTCAACGCCGCCACT TTCCTTTGCCAGAGGTGTGAGACAATCTTAAAGCCAGGCTTCAACTGCACTGTCCGCATA AGGAACAAGAGAAATAAAGCAAAACGTCGGAAGAAATCAAACTGTTGTCAGAACAGTGTT TCCTATGCATGCCATTTCTGTGGAGATCAGAACCTAATATTGGGTAGTGGGAAGGGTGTT GTTCAGAGCCTGTTACTGTCAAGAGGGCATGCTACCATGAACTCATCCCATATAATTGTG AGAGGAAACGGTAGCAACACAAGAGCACATGATAAGAAAGAAGTGCTTGAGCTTTCTCAA GCAGCAATTTTGCAAGTGGAATCGTCATCTCTGTTGAGGCAGTCGACTACTGAAAGTGAC GAGCATGGCGAAAGGTTAAATTGTAATCTTGATGAACAGATGCGTGAAACTAGCCATATT TTTCCTGAGAAGGTTAGGATATGTGAAGCTACTTTGCAAGCAGAACTTGCACCTGGTTCA TCATTTGTCACGCCTCAGAAAATGAAACCACCGGTGGTGACTGTTGCAAAAGATTCAGCA GGACTACTCAAGACAGGAAGTGGCATGATTTCTGGCTCAGCCATTGACGCCCTCTCAGGC TCCAGCAAGTCTGCCTCGAATGGCTCTAGAAATAATGTGAAATATGCAGCAAGAGATTCT TCTCAGGTTTCTGGCAGCTCAAGGAAGCGGGCAAGGAAGGGTTGGACAACGCTGAAACAG ATGGCTGAGAAGGATGAGCTCGAGAGGAAGGAGAAGATGGGGAATTTTGTAATCCCGTTC TTCATGCAGTAAGTGGGATGCTAAAATATTTGCCGGCATTGTGATCGTTTGGTCATTAGT TTATCTATTGAGAAGGACAGTGTTTTTTTTTGCCGGCTAGATTTTGCAGTATTAAAGATA CGAGGTTAACAAAGTTTGGTTGAATTAACAACATGTGATTAAAGGGG