Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d044570_T064
CDS Infomation	cds chromosome:B73_RefGen_v4:3:231982572:232013922:1 gene:Zm00001d044570 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pre-mRNA-processing protein 40A
Sequence	ATGCCAGTTGCAGGGAAGATTAATGTCACTCCAGTGGAGGAGAAAACAAGTGAAGAAGAA CCTGTAGTCTATGCCACTAAGATGGAAGCAAAAAATGCGTTCAAGTCCCTGCTTGAGTCG GTAAATGTGGAGTCTGATTGGACATGGGATCAGACTATGAGAGTCATCATAAATGACAAA AGATATGGTGCTTTGAAAACTCTTGGAGAGAGAAAGCAAGCTTTCAATGAGTACTTGAAC CAGCGCAAAAAGTTTGAAGCCGAAGAAAAACGTATCAAACAGAGGAAAGCACGTGATGAT TTCCTTGCAATGTTGGAAGAACGCAAGGAGCTTACATCATCAACAAGATGGAGCAAAGCA ATACTTATGTTTGAAGATGATGAAAGATTCAAAGCAGTTGAACGTCCAAGGGAGCGTGAA GATTTATTTGAGAACTATCTTGTGGAACTGCATAAGAAGGAAAAAGCCAAGGCTGCTGAA GAACACAAAAGATATGTAGCAGAATACAGAGCTTTTCTAGAATCATGTGACTTCATCAAG GCAAGTACTCAGTGGAGAAAAGTTCAGGAACGTCTGGAGGACGATGAACGTTATTCCCGA CTTGAGAAGTTTGATCGGTTGGATATTTTTCAAGAGTACATTCGACACCTAGAGAAAGAA GAGGAAGAGCAGAAGCGGGTACAAAAGGATCAAGTGAGAAGACAAGAGAGGAAAAACCGT GATGGGTTTCGTAAAATGCTGGAAGAACATGTTGCTGATGGCACACTTAATGCAAGAACT CGGTGGCGTGATTACTGTGCACAGATAAAAGATTCACAGTCCTACTTGGCTGTAGCGTCA AACACATCTGGCTCTACACCGAAAGAGTTATTTGATGACGTGATCGAGGAACTTGACAAA CAGTATCAAGAAGACAAGACCCAAATTAAAGAAGTGGTGAAATCTGGAAAGATTCCTATG ACAACATCATGGACATTAGAGGAATTCCAAACTGCTATTCTGGAGGATGATGCTCTTAAA GGAATATCAACCATCAACATCAAGCTTATCTATGATGATCAGCTTGAAAGGCTCAAGGAA AAAGAGCAAAAGGAGGCTAAGAAGCGCCAGCGTTTGGGTGAAAATTTTTCAGATCTTTTG TATTCCATCAAGGAAATATCAGCTTCTTCAACATGGGATGATTCTAAACAGCTTTTCGAG GATAGCCAAGAGTTCAGGGCCTTGGACAGTGAGACTTATGCTAGAGAGCTTTTTGAAGAG TGCGTTGTCCACCTGAAAGAAAGGTTAAAAGAGAAAGAACGTTTGAGGGAGGAAGAAAAG GCAAAAAGAGAGAAAGAGCGTGAGGAGAAAGAGAAGAAGAAAGAGAAAGAGAAAGAAAGG AAGGAGAAAGAACGCAAAGAAAAAGAAAGAGACCACCGGGAGGAGAGAGAAAAGGAGAAA GGGAAGGATCGATCAAGGAGAGATGAAATGGAGTTTGATGGTGCTGATTTGAACACCCAT GGTACAAAAGATAAGAAAAGAGATAAAGAAAAAGAAAAGAAACATAAGAGACGTCACCAT GACACAGATGATGTAAGCTCTGAGAGGGATGATAAAGACGATGCTAAGAAGTCTCGGAGG CATAGCAGCAGTGATCGCAAGAAATCTAGGAAGCATGCACATGGCTCAGATTCAGATAGT GAAAACCGGCACAAAAGACATAAAAAGGACCGAGATAGTAGTAGAAGAAATGGAGCACAT GAGCTGGAAGATGGTGAACTTGGAGAGGATGGGGAGATCTATTAG

Peptide Sequence

PEP ID	Zm00001d044570_P064
PEP Infomation	pep chromosome:B73_RefGen_v4:3:231982572:232013922:1 gene:Zm00001d044570 transcript:Zm00001d044570_T064 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pre-mRNA-processing protein 40A
Sequence	MPVAGKINVTPVEEKTSEEEPVVYATKMEAKNAFKSLLESVNVESDWTWDQTMRVIINDK RYGALKTLGERKQAFNEYLNQRKKFEAEEKRIKQRKARDDFLAMLEERKELTSSTRWSKA ILMFEDDERFKAVERPREREDLFENYLVELHKKEKAKAAEEHKRYVAEYRAFLESCDFIK ASTQWRKVQERLEDDERYSRLEKFDRLDIFQEYIRHLEKEEEEQKRVQKDQVRRQERKNR DGFRKMLEEHVADGTLNARTRWRDYCAQIKDSQSYLAVASNTSGSTPKELFDDVIEELDK QYQEDKTQIKEVVKSGKIPMTTSWTLEEFQTAILEDDALKGISTINIKLIYDDQLERLKE KEQKEAKKRQRLGENFSDLLYSIKEISASSTWDDSKQLFEDSQEFRALDSETYARELFEE CVVHLKERLKEKERLREEEKAKREKEREEKEKKKEKEKERKEKERKEKERDHREEREKEK GKDRSRRDEMEFDGADLNTHGTKDKKRDKEKEKKHKRRHHDTDDVSSERDDKDDAKKSRR HSSSDRKKSRKHAHGSDSDSENRHKRHKKDRDSSRRNGAHELEDGELGEDGEIY

Transcript Sequence

Transcript ID	Zm00001d044570_T064
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:231982572:232013922:1 gene:Zm00001d044570 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pre-mRNA-processing protein 40A
Sequence	CAGAAACAACGATGAAAATTCATCTCTGACCACTGGGGCTGACGCAGAGGATGGTACATC GGCTGAAGATTTGGAGGAGGCCAAAAAGACCATGCCAGTTGCAGGGAAGATTAATGTCAC TCCAGTGGAGGAGAAAACAAGTGAAGAAGAACCTGTAGTCTATGCCACTAAGATGGAAGC AAAAAATGCGTTCAAGTCCCTGCTTGAGTCGGTAAATGTGGAGTCTGATTGGACATGGGA TCAGACTATGAGAGTCATCATAAATGACAAAAGATATGGTGCTTTGAAAACTCTTGGAGA GAGAAAGCAAGCTTTCAATGAGTACTTGAACCAGCGCAAAAAGTTTGAAGCCGAAGAAAA ACGTATCAAACAGAGGAAAGCACGTGATGATTTCCTTGCAATGTTGGAAGAACGCAAGGA GCTTACATCATCAACAAGATGGAGCAAAGCAATACTTATGTTTGAAGATGATGAAAGATT CAAAGCAGTTGAACGTCCAAGGGAGCGTGAAGATTTATTTGAGAACTATCTTGTGGAACT GCATAAGAAGGAAAAAGCCAAGGCTGCTGAAGAACACAAAAGATATGTAGCAGAATACAG AGCTTTTCTAGAATCATGTGACTTCATCAAGGCAAGTACTCAGTGGAGAAAAGTTCAGGA ACGTCTGGAGGACGATGAACGTTATTCCCGACTTGAGAAGTTTGATCGGTTGGATATTTT TCAAGAGTACATTCGACACCTAGAGAAAGAAGAGGAAGAGCAGAAGCGGGTACAAAAGGA TCAAGTGAGAAGACAAGAGAGGAAAAACCGTGATGGGTTTCGTAAAATGCTGGAAGAACA TGTTGCTGATGGCACACTTAATGCAAGAACTCGGTGGCGTGATTACTGTGCACAGATAAA AGATTCACAGTCCTACTTGGCTGTAGCGTCAAACACATCTGGCTCTACACCGAAAGAGTT ATTTGATGACGTGATCGAGGAACTTGACAAACAGTATCAAGAAGACAAGACCCAAATTAA AGAAGTGGTGAAATCTGGAAAGATTCCTATGACAACATCATGGACATTAGAGGAATTCCA AACTGCTATTCTGGAGGATGATGCTCTTAAAGGAATATCAACCATCAACATCAAGCTTAT CTATGATGATCAGCTTGAAAGGCTCAAGGAAAAAGAGCAAAAGGAGGCTAAGAAGCGCCA GCGTTTGGGTGAAAATTTTTCAGATCTTTTGTATTCCATCAAGGAAATATCAGCTTCTTC AACATGGGATGATTCTAAACAGCTTTTCGAGGATAGCCAAGAGTTCAGGGCCTTGGACAG TGAGACTTATGCTAGAGAGCTTTTTGAAGAGTGCGTTGTCCACCTGAAAGAAAGGTTAAA AGAGAAAGAACGTTTGAGGGAGGAAGAAAAGGCAAAAAGAGAGAAAGAGCGTGAGGAGAA AGAGAAGAAGAAAGAGAAAGAGAAAGAAAGGAAGGAGAAAGAACGCAAAGAAAAAGAAAG AGACCACCGGGAGGAGAGAGAAAAGGAGAAAGGGAAGGATCGATCAAGGAGAGATGAAAT GGAGTTTGATGGTGCTGATTTGAACACCCATGGTACAAAAGATAAGAAAAGAGATAAAGA AAAAGAAAAGAAACATAAGAGACGTCACCATGACACAGATGATGTAAGCTCTGAGAGGGA TGATAAAGACGATGCTAAGAAGTCTCGGAGGCATAGCAGCAGTGATCGCAAGAAATCTAG GAAGCATGCACATGGCTCAGATTCAGATAGTGAAAACCGGCACAAAAGACATAAAAAGGA CCGAGATAGTAGTAGAAGAAATGGAGCACATGAGCTGGAAGATGGTGAACTTGGAGAGGA TGGGGAGATCTATTAGTCTTTCTGTTTGCTACCGAGATTCTACTTGTAGCATTCATCTCC AGTCTTGTTACACATGGATTTATTGCCATCTCTTGCCTGTTGAGTTGCGCACTTGGGCTG AAGCCTACCAGCTGGATTTTTGCTCTGCCGCACCTGTGATGCTACTGCTGGGGGGCAATG GATATAGCAATAACACCAGCTACTGCTGGGGGGCAATGGATGTAGCAATAACACCAGCCC ATGCTTGACACCTTTCTTTGGTCCTTCTGGCAGCTGACCAGGCTAAATTTTCATTTCCTT CAAAGTCCATGGTGCTGTCTGTGCTGAGGTAACAGATTGCTCAGTTTGCAACGAGTTTCT TTGTGAGTGATGTGCTTTTGGGAGAGCATGGAGTGTTTGATTTGTCGCTAATGTCATGTT AAGGCTTGTTCATTGTACTAGGATTTAGTTATCTATGGAAATTTGTCAAGGATTGCTGGG CTTGAAGATTCAGCGTGTTTGTATTATGGTTTTCATTTACTAGCTTATCCAGGTCTGCTC TTAAACCCGTAGGGCTTTGTACCCAGAAAAGTACTGGCTGCTTTCAGACGCAGGCATCCT GTTGGGGAGAGTTGGCAGCGTATCATCATTTTATTAGCATTCTAGC