Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d044555_T019
CDS Infomation

cds chromosome:B73_RefGen_v4:3:231675879:231685374:1 gene:Zm00001d044555 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium permeable stress-gated cation channel 1
Sequence

ATGGCTACAATTCAAGATATAGGACTCTCTGCGGCTATCAACATAATGGGTGCTGTACTG
TTCCTAGTTGCATTTGCTTTCCTTCGACTGCAGCCAATCAATGATAGGGTTTACTTCCCA
AAATGGTACCTCAAAGGTGCAAGAGAGAGTCCAAGTCATGGGGGTACATTTGTCCGGAAG
TTTGTCAATTTGGACATGCGTTCATACTTGAAATTTTTAAGTTGGGTGCCTGCTGCTCTC
AAAATGCCTGAGGATGAGTTGATTAGCCATGCCGGTCTGGATTCAGCTGTGTATCTGAGG
ATTTACTTGGTCGGACTTAAAATATTTGCTCCAATCTCAGTTCTAGCTTTCATTGTTCTT
GTCCCTGTTAATTGGACCAATGATACTCTGCAATTCTCGAAGTTAGAGCACAGCAATGTT
GATAAGCTTTCAATATCAAACATACCAGTTGGATCAAAAAGGTTTATAGCCCACTTGGCA
ATGGCGTATGTTTTCACATTTTGGACCTGCTATGTACTGTTACGTGAGTATGAAGTAGTT
GCAAAGATGAGACTGCGATTTCTTTCATCAGAGAAACGCAGACCAGATCAGTTCACGGTC
CTTGTGCGGAATATACCGCCTGATCCAGATGAATCAATTAGTGAGCTTGTGGAACATTTC
TTTCTTGTGAATCATCCTGGTCACTATCTGACACATCAGGTGGTTTACAATGCAAATAAA
CTTGCTAAATTGGTGAAAGAGAAAGCAAAGATGCATAATTGGCTTGACTACTATCAGCTG
AGATTTGAAAGGAATGCATCTAAAAGGCCTACTACTAAGACTGGTTTTCTTGGTTGTTTT
GGTACGAAGGTGGATGCCATTGAATACTACACATCAGAAATTGAGAGGATAGAAAATGAA
AATACCTATCATGAATTATCAGATTTAAACCCTCATCTAAATGATATTCAGGAAGCAGAA
GAGCGTGAAAAAATTGTAAAGGATCCCAAATCCATTGTACCAGCAGCATTTGTTTCCTTC
CGATCACGTTGGGGTGCAGCAGTTTGTGCTCAGACACAGCAAACCAGTAACCCAACTGTT
TGGTTGACAGAATGGGCTCCAGAACCTCGTGATGTGTACTGGGATAATTTGTCTATTCCA
TTTGTCTCCCTTACAGTTCGAAGGCTGATAATTGCAGTGGCATTCTTCTTCCTGAACTTC
TTTTATGTGTTCCCAATAGCATTTGTTCAGTCTCTTGCAAATCTTGAAGGGATTGAGAAG
GCAGCGCCGTTTCTGAAGCCTCTGATTGAAGAGCATACTATTAAATCATTCATCCAAGGT
TTCCTTCCGGGAATTGCTCTGAAGATCTTCCTTATATTGCTCCCAAGCATATTAATGTTT
ATGTCTAAGGTTGAAGGATTGACCTCAATATCTTCACTGGAGAGAAGATCTGCATCAAAG
TATTATATTTTCATATTCTTCAATGTGTTTCTGGCAAGCATTATTGCAGGATCTGCTTTA
GAGCAGCTAAAAAGCTATATTCATCAGTCAGCAAATGAAATACCAAGGACGATTGGTGAA
GCAATTCCAATGAAGGCAACCTTTTTTATAACATATACAATGGTTGATGGTTGGGCTGGG
GTAGCTGGTGAGATATTGAGATTGAAGCCACTAGTGATCTTCCACCTGAAAAACTTTTTC
TTGGTCAAGACTGAGAAAGACAGGGAAGAGGCAATGGACCCTGGAAGTATTGGTTTTGAC
TCAAGCGAACCTCAAATTCAGCTGTATTTCTTACTTGGTCTTGTCTATGCGGCAGTGACA
CCATTTTTGCTCCCTTTTGTATTGATATTCTTTGGGTTTGCGTACGTTGTATACCGCCAC
CAGATAATAAATGTGTATAATCAAGAATACGAGAGTGCAGCAGCATTTTGGCCAAGTGTT
CATGGACGCATAATCACAGCGTTGATTGTATCACAGCTGCTTCTCCTTGGGTTACTTAGC
ACAAAAGGCGCTGGCCAGTCAACACCTGTGCTCCTTGTTCTTCCTGTAGTGACCTTCTAT
TTCCACAAGTACTGCAACAACCGCTACAAACCGACTTTTGTGAAATGCCCATTGCAGGAG
GCGATGAAGAAGGATACCCTGGAACGTGCCAGAGAGCCAGGATTTGACCTCAAAGGATAC
CTAATGAATGCCTACATCCACCCGGTGTTCAAAGGTGATGGGGACGACGACAAGTTCTCA
GTCGCAGATGAACCAGAAGCCGAGCAAGTCCTGGTGGCAACCAAGCGGCAGTCCAGGCGG
AACACCCCCGTGCCCAGTAAATACAATGGGTCGGAATCACCTTCGCTTCCTGAAATTGTA
AATGACCAACGGCTATAA

Peptide Sequence

PEP ID

Zm00001d044555_P019
PEP Infomation

pep chromosome:B73_RefGen_v4:3:231675879:231685374:1 gene:Zm00001d044555 transcript:Zm00001d044555_T019 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium permeable stress-gated cation channel 1
Sequence

MATIQDIGLSAAINIMGAVLFLVAFAFLRLQPINDRVYFPKWYLKGARESPSHGGTFVRK
FVNLDMRSYLKFLSWVPAALKMPEDELISHAGLDSAVYLRIYLVGLKIFAPISVLAFIVL
VPVNWTNDTLQFSKLEHSNVDKLSISNIPVGSKRFIAHLAMAYVFTFWTCYVLLREYEVV
AKMRLRFLSSEKRRPDQFTVLVRNIPPDPDESISELVEHFFLVNHPGHYLTHQVVYNANK
LAKLVKEKAKMHNWLDYYQLRFERNASKRPTTKTGFLGCFGTKVDAIEYYTSEIERIENE
NTYHELSDLNPHLNDIQEAEEREKIVKDPKSIVPAAFVSFRSRWGAAVCAQTQQTSNPTV
WLTEWAPEPRDVYWDNLSIPFVSLTVRRLIIAVAFFFLNFFYVFPIAFVQSLANLEGIEK
AAPFLKPLIEEHTIKSFIQGFLPGIALKIFLILLPSILMFMSKVEGLTSISSLERRSASK
YYIFIFFNVFLASIIAGSALEQLKSYIHQSANEIPRTIGEAIPMKATFFITYTMVDGWAG
VAGEILRLKPLVIFHLKNFFLVKTEKDREEAMDPGSIGFDSSEPQIQLYFLLGLVYAAVT
PFLLPFVLIFFGFAYVVYRHQIINVYNQEYESAAAFWPSVHGRIITALIVSQLLLLGLLS
TKGAGQSTPVLLVLPVVTFYFHKYCNNRYKPTFVKCPLQEAMKKDTLERAREPGFDLKGY
LMNAYIHPVFKGDGDDDKFSVADEPEAEQVLVATKRQSRRNTPVPSKYNGSESPSLPEIV
NDQRL

Transcript Sequence

Transcript ID

Zm00001d044555_T019
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:231675879:231685374:1 gene:Zm00001d044555 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium permeable stress-gated cation channel 1
Sequence

ACAGCAGGATCACTATCTTGCTTTCATTTGTATGGCTGCATGCTACCAACCCTTTTCTTT
TCAGTTTCTGATAGAAGTGCTGTCCGCCCGCCCATGTCCTAGTGTTAAAACATGATAAAT
TCAATAGAATTTTCTCCTAAGCTATTTAAAGGACAACTATGGCTACAATTCAAGATATAG
GACTCTCTGCGGCTATCAACATAATGGGTGCTGTACTGTTCCTAGTTGCATTTGCTTTCC
TTCGACTGCAGCCAATCAATGATAGGGTTTACTTCCCAAAATGGTACCTCAAAGGTGCAA
GAGAGAGTCCAAGTCATGGGGGTACATTTGTCCGGAAGTTTGTCAATTTGGACATGCGTT
CATACTTGAAATTTTTAAGTTGGGTGCCTGCTGCTCTCAAAATGCCTGAGGATGAGTTGA
TTAGCCATGCCGGTCTGGATTCAGCTGTGTATCTGAGGATTTACTTGGTCGGACTTAAAA
TATTTGCTCCAATCTCAGTTCTAGCTTTCATTGTTCTTGTCCCTGTTAATTGGACCAATG
ATACTCTGCAATTCTCGAAGTTAGAGCACAGCAATGTTGATAAGCTTTCAATATCAAACA
TACCAGTTGGATCAAAAAGGTTTATAGCCCACTTGGCAATGGCGTATGTTTTCACATTTT
GGACCTGCTATGTACTGTTACGTGAGTATGAAGTAGTTGCAAAGATGAGACTGCGATTTC
TTTCATCAGAGAAACGCAGACCAGATCAGTTCACGGTCCTTGTGCGGAATATACCGCCTG
ATCCAGATGAATCAATTAGTGAGCTTGTGGAACATTTCTTTCTTGTGAATCATCCTGGTC
ACTATCTGACACATCAGGTGGTTTACAATGCAAATAAACTTGCTAAATTGGTGAAAGAGA
AAGCAAAGATGCATAATTGGCTTGACTACTATCAGCTGAGATTTGAAAGGAATGCATCTA
AAAGGCCTACTACTAAGACTGGTTTTCTTGGTTGTTTTGGTACGAAGGTGGATGCCATTG
AATACTACACATCAGAAATTGAGAGGATAGAAAATGAAAATACCTATCATGAATTATCAG
ATTTAAACCCTCATCTAAATGATATTCAGGAAGCAGAAGAGCGTGAAAAAATTGTAAAGG
ATCCCAAATCCATTGTACCAGCAGCATTTGTTTCCTTCCGATCACGTTGGGGTGCAGCAG
TTTGTGCTCAGACACAGCAAACCAGTAACCCAACTGTTTGGTTGACAGAATGGGCTCCAG
AACCTCGTGATGTGTACTGGGATAATTTGTCTATTCCATTTGTCTCCCTTACAGTTCGAA
GGCTGATAATTGCAGTGGCATTCTTCTTCCTGAACTTCTTTTATGTGTTCCCAATAGCAT
TTGTTCAGTCTCTTGCAAATCTTGAAGGGATTGAGAAGGCAGCGCCGTTTCTGAAGCCTC
TGATTGAAGAGCATACTATTAAATCATTCATCCAAGGTTTCCTTCCGGGAATTGCTCTGA
AGATCTTCCTTATATTGCTCCCAAGCATATTAATGTTTATGTCTAAGGTTGAAGGATTGA
CCTCAATATCTTCACTGGAGAGAAGATCTGCATCAAAGTATTATATTTTCATATTCTTCA
ATGTGTTTCTGGCAAGCATTATTGCAGGATCTGCTTTAGAGCAGCTAAAAAGCTATATTC
ATCAGTCAGCAAATGAAATACCAAGGACGATTGGTGAAGCAATTCCAATGAAGGCAACCT
TTTTTATAACATATACAATGGTTGATGGTTGGGCTGGGGTAGCTGGTGAGATATTGAGAT
TGAAGCCACTAGTGATCTTCCACCTGAAAAACTTTTTCTTGGTCAAGACTGAGAAAGACA
GGGAAGAGGCAATGGACCCTGGAAGTATTGGTTTTGACTCAAGCGAACCTCAAATTCAGC
TGTATTTCTTACTTGGTCTTGTCTATGCGGCAGTGACACCATTTTTGCTCCCTTTTGTAT
TGATATTCTTTGGGTTTGCGTACGTTGTATACCGCCACCAGATAATAAATGTGTATAATC
AAGAATACGAGAGTGCAGCAGCATTTTGGCCAAGTGTTCATGGACGCATAATCACAGCGT
TGATTGTATCACAGCTGCTTCTCCTTGGGTTACTTAGCACAAAAGGCGCTGGCCAGTCAA
CACCTGTGCTCCTTGTTCTTCCTGTAGTGACCTTCTATTTCCACAAGTACTGCAACAACC
GCTACAAACCGACTTTTGTGAAATGCCCATTGCAGGAGGCGATGAAGAAGGATACCCTGG
AACGTGCCAGAGAGCCAGGATTTGACCTCAAAGGATACCTAATGAATGCCTACATCCACC
CGGTGTTCAAAGGTGATGGGGACGACGACAAGTTCTCAGTCGCAGATGAACCAGAAGCCG
AGCAAGTCCTGGTGGCAACCAAGCGGCAGTCCAGGCGGAACACCCCCGTGCCCAGTAAAT
ACAATGGGTCGGAATCACCTTCGCTTCCTGAAATTGTAAATGACCAACGGCTATAAAGAT
GTCTACAGTTTTCCTATGTATACTAGGTATATGCCCGTGCGTTGCCACGGAAGTTAAAAA
ATAGTATAAAACATGTATACCGAACACCATGTTCTAGACAATGCTAGTGAAACTGAAATA
AAAATAGCTACATAATTGCTTAAATAGTTATACAGCTCGTAGCACAAACAAAACAAAGTT
GGGCATAACGTTAAGTGACACTTTTCCTGTATCAGACTTGGACTATGTCCCGGCTAATGC
TTGTAGCCTTTGAATATTATCGGGACCCATTGATC