Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d044506_T012
CDS Infomation	cds chromosome:B73_RefGen_v4:3:230165560:230184963:1 gene:Zm00001d044506 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein MICRORCHIDIA 6
Sequence	ATGGATCCTGAGGCACTGAGACGTTGCATGAGCTTCGGATTTTCAGATAAACAGTCTGAT GCTTTCATTGGGCAATATGGCAATGGTTTCAAGACTAGTACGATGCGGCTTGGAGCAGAT GTGATTGTTTTTACACAAAACCAAAATAACTGGGTGCCAACTAGAAGTATCGGCCTTCTT TCTTACACATTTTTGATGGAAACAGGTTGCGATGATGTGCTGGTGCCAACGGTAGACTAT CAGTATGATCTAACAACAACTTCATATGTTCAGATGTTGCGTCATGATCAGAAGCTCTTC TCTTCTAATTTGGCAATCCTTCTCAAATGGTCCCCTTTTTCTACTGAAGCTGAGTTGCTT AAACAATTTGATGATATGGGAGATCATGGAACAAAGATAATTGTATTCAACCTCTGGTTC AATGATGATGGGGATATGGAGCTTGATTTCAACTCTGACAAAAAGGATATCCTCATTACT GGGGCCCACAAGAAGGTGAAAACAAACAGTTTGGACAAGATTGCTGCACAGAACTACGTC TCAACTCGGCTTCGCTATTCTCTTAGAGCATATGCATCTATCTTGTATCTTCATGTACCT GATACTTTCAGAATTATCCTGCGGGGATGTGATGTGGAACCACATAATGTAGTTAATGAT TTGATGTATCGGGAGTGCGTGTTGTATAAACCACAAATTGCTGGACTTACAGAGTCATCG GTAATCACAACCATTGGGTTTGTTAAAGGTGCACCAGATATAGATGTACAAGGGTTTAAT GTATATCACAAAAACCGTCTAATATTGCCCTTCTGGAAAGTTGCAAACAACTCATACGGG AAAGGACGAGGAGTTGTTGGCATTCTGGAGGCCAACTTTATCAAACCTACCCATGACAAG CAGGATTTTGAGAAGTCAGTCCTTTATCAAAGACTTGAGTTCCGCTTGAAAGAAATGACT TACGAATACTGGGACCTTCATTGCCATCGTGTTGGATATGACAACAAAAAATTACCTAAA GCAACCCGTGCTATTAATCGTGCCAATCATATGAACGGTGGCAGTTCCCCAACAAGTGCT CCACCTCGGTTGCTTGCAGTTGATATTCCAACAAGCAGCTCTAGTATACCTAGATTATCA GCCTCTGCAGCAAGAGAAAAGATCAGTAGTCTCGATTCTCTTCCCAAGAGCATGATTGGA TTGAAGAGGAAGTTTAATCCTTTCGGTGCTGTGGCGGCCAGTGCTGATCAGGATGGACTA CATCATATGGATAAAATAGATGTTTCTCAACGAAGACGGTTTAATGAATACAAAACTTTG ACCCTGGAGAATGACAAGTTGCGAAATGAATGCTTACAATACGAGGGATCAGAGAAACAA CTTGTCCTGAAGGAACAAAAGCTCCGATCTGAAATTGCTGAGGTGGAAAAGAAGTATCAG GAATTGTTGGGAGAGCTCAGATCATTGGATGTGAAGAAAGAGAAACAATGA

Peptide Sequence

PEP ID	Zm00001d044506_P012
PEP Infomation	pep chromosome:B73_RefGen_v4:3:230165560:230184963:1 gene:Zm00001d044506 transcript:Zm00001d044506_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein MICRORCHIDIA 6
Sequence	MDPEALRRCMSFGFSDKQSDAFIGQYGNGFKTSTMRLGADVIVFTQNQNNWVPTRSIGLL SYTFLMETGCDDVLVPTVDYQYDLTTTSYVQMLRHDQKLFSSNLAILLKWSPFSTEAELL KQFDDMGDHGTKIIVFNLWFNDDGDMELDFNSDKKDILITGAHKKVKTNSLDKIAAQNYV STRLRYSLRAYASILYLHVPDTFRIILRGCDVEPHNVVNDLMYRECVLYKPQIAGLTESS VITTIGFVKGAPDIDVQGFNVYHKNRLILPFWKVANNSYGKGRGVVGILEANFIKPTHDK QDFEKSVLYQRLEFRLKEMTYEYWDLHCHRVGYDNKKLPKATRAINRANHMNGGSSPTSA PPRLLAVDIPTSSSSIPRLSASAAREKISSLDSLPKSMIGLKRKFNPFGAVAASADQDGL HHMDKIDVSQRRRFNEYKTLTLENDKLRNECLQYEGSEKQLVLKEQKLRSEIAEVEKKYQ ELLGELRSLDVKKEKQ

Transcript Sequence

Transcript ID	Zm00001d044506_T012
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:230165560:230184963:1 gene:Zm00001d044506 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein MICRORCHIDIA 6
Sequence	GCCATTGCCGAGCTCCTTGACAATGCAATCGATGAGGTGAACAATGGGGCAACATTTGTC CGTGTTAATAAATTTAAAAACCCACGAGATGGGAACCCCTCATTGTTGGTTCAAGATGAT GGAGGGGGGATGGATCCTGAGGCACTGAGACGTTGCATGAGCTTCGGATTTTCAGATAAA CAGTCTGATGCTTTCATTGGGCAATATGGCAATGGTTTCAAGACTAGTACGATGCGGCTT GGAGCAGATGTGATTGTTTTTACACAAAACCAAAATAACTGGGTGCCAACTAGAAGTATC GGCCTTCTTTCTTACACATTTTTGATGGAAACAGGTTGCGATGATGTGCTGGTGCCAACG GTAGACTATCAGTATGATCTAACAACAACTTCATATGTTCAGATGTTGCGTCATGATCAG AAGCTCTTCTCTTCTAATTTGGCAATCCTTCTCAAATGGTCCCCTTTTTCTACTGAAGCT GAGTTGCTTAAACAATTTGATGATATGGGAGATCATGGAACAAAGATAATTGTATTCAAC CTCTGGTTCAATGATGATGGGGATATGGAGCTTGATTTCAACTCTGACAAAAAGGATATC CTCATTACTGGGGCCCACAAGAAGGTGAAAACAAACAGTTTGGACAAGATTGCTGCACAG AACTACGTCTCAACTCGGCTTCGCTATTCTCTTAGAGCATATGCATCTATCTTGTATCTT CATGTACCTGATACTTTCAGAATTATCCTGCGGGGATGTGATGTGGAACCACATAATGTA GTTAATGATTTGATGTATCGGGAGTGCGTGTTGTATAAACCACAAATTGCTGGACTTACA GAGTCATCGGTAATCACAACCATTGGGTTTGTTAAAGGTGCACCAGATATAGATGTACAA GGGTTTAATGTATATCACAAAAACCGTCTAATATTGCCCTTCTGGAAAGTTGCAAACAAC TCATACGGGAAAGGACGAGGAGTTGTTGGCATTCTGGAGGCCAACTTTATCAAACCTACC CATGACAAGCAGGATTTTGAGAAGTCAGTCCTTTATCAAAGACTTGAGTTCCGCTTGAAA GAAATGACTTACGAATACTGGGACCTTCATTGCCATCGTGTTGGATATGACAACAAAAAA TTACCTAAAGCAACCCGTGCTATTAATCGTGCCAATCATATGAACGGTGGCAGTTCCCCA ACAAGTGCTCCACCTCGGTTGCTTGCAGTTGATATTCCAACAAGCAGCTCTAGTATACCT AGATTATCAGCCTCTGCAGCAAGAGAAAAGATCAGTAGTCTCGATTCTCTTCCCAAGAGC ATGATTGGATTGAAGAGGAAGTTTAATCCTTTCGGTGCTGTGGCGGCCAGTGCTGATCAG GATGGACTACATCATATGGATAAAATAGATGTTTCTCAACGAAGACGGTTTAATGAATAC AAAACTTTGACCCTGGAGAATGACAAGTTGCGAAATGAATGCTTACAATACGAGGGATCA GAGAAACAACTTGTCCTGAAGGAACAAAAGCTCCGATCTGAAATTGCTGAGGTGGAAAAG AAGTATCAGGAATTGTTGGGAGAGCTCAGATCATTGGATGTGAAGAAAGAGAAACAATGA ACTCTCCACTTCAGCGCCTGTTGTACAATTAATTGCTCTTTTTTCTTTCCTGACCTGTGA AGATGATGACTGGATTACTTCCCGAGACGTGCAGGGAACTGGTCCCTTGGACAAATGTTA TCTACCGATTACCATTCGCTTGGTAGTTTCGTTGGATAGCTGTAGAGGTGTAATTTCGTT TCACTAATCTTCCTAGGGTCCTGTGATGGTGGAAGAAAGTGAGCATGTAGTCTGTTGTAA AATTATGCAACTTGTATCTGAATGTACAGCAGCGGTTTCAATGTTAATGGCCCTCTGTTT CCAG