Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d044498_T012
CDS Infomation	cds chromosome:B73_RefGen_v4:3:229727235:229748483:-1 gene:Zm00001d044498 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc protease PQQL-like
Sequence	ATGGATCTGCTCCCGCCGCCGACGGACGCGCCGGATGCCGGCGGCCCCAGCGCCGGCGGG TCAGGCCGGGGGCTGCGCCGCGGGATCGGGTTCCGGTCGCTGAAGCTGGTCAGCGTTGCC ATGGACGAGACCCTGCCCGTCGACCCCGTCGGCGCCACCTACGGCCGCCTCGCCAACGGC CTCACCTACTACGTCCGCTCAAACCCAAAGCCACGCATGCGCGCCGCGCTCTCGCTTGCC GTCAAGGTCGGGTCGGTGGTAGAGGAGGAGGACGAGCGCGGTGTGGCGCACATCGTTGAG CACCTCGCCTTCAGCGCCACCGCGCGATATACCAACCACGACATCGTCAAGTTCCTCGAG AGCATAGGGGCCGAGTTCGGTGCCTGCCAGAACGCGCTCACCTCATCGGATGAGACTATT TACGAGCTGCTCGTACCCGTCGACAAGCCAGGCCTGCTCTCCCAGGCTATATCTGTCCTC GCAGAGTTCAGCTCAGAGGTTAGGGTGTCAGCAGAGGATCTGGAGAAAGAGAGGGGTGCT GTGCTGGAGGAGTACAGGGGTGGACGCAATGCAGCAGGCCGGATGCAGGACTCCCACTGG GCACTGTTGTTTGATGGTTCTAAGTATGCAGAGCGCCTGCCAATTGGTACTGAGAAGGTG ATACGAACTGTTACACATGAGACCGTGAAGCGGTTTTATCAGAAGTGGTACCATCTAAGC AATATGGCGGTATTTGCAGTGGGTGATTTCCCAGATACACAGGCTGTCGTGGAGTTGATA AATGAGCATTTTGGGCACAAAGCTCCAGCTCCCCACCCTCCTCCAGTTATACCAGAATTT TCAGTTCCATCGCATGAGGAACCACGCTTTTCATGTTTTGTGGAATCTGAAGCTGCAGGG TCGGCTGTTGTTATCAGCTGCAAGATGCCTGCTGGTGGAATTAAAACAGTAAAGGACTAC AAAGATTCACTGGCAGAGTCCATGTTTCATTGTGCGCTAAACCAGAGGCTCTTCAAAATA TCTCGTAGAAAGGATCCTCCTTATTTTTCTTGCTCCTCAGCTGCAGATGCTCTCGTCTGT CCAGTTAAGGCTTACATTATGACATCTAGTTGTCGGGAAAGGGGAACAGTTGAAGCTCTC GAGTCCATGCTTCTTGAGGTTGCTAGGGTACGGCTTCATGGATTTTCTGACCGTGAGATA TCCATTGTACGCGCCCTAATGATGTCAGAGATGGAATCTGCATATTTGGAGCGTGATCAA ATGCAATCTACCAGCTTACGGGATGAGTTTTTGCAGCATTTTCTTCGTGAGGAACCTGTT GTTGGGATTGAATATGAAGCACAGTTACAAAAGACTCTTCTTCCCCATATTTCTTCTGCG GAAGTGGCAAAATTTGCAGAAAACTTTTCAACGGCCAGCAGCTGTGTTATCAAGATAGTT GAACCTCGAGCTCATGCTTCTTTGGAGGATCTGAAAGCAGTTGTGCTGAAAGTCAACAGT ATGGAAGAAGATAAATCTATTTTTCCATGGGATGAAGAACAAATTCCAGAAGAAATTGTT GCCCAAGCTCCAGAGCCAGGGACTATAATTGCTAAAGTGGAGCACCCAGGCATAGGTGCT ACTGAGATGATACTTTCAAATGGCATGCGGATTTGTTACAAGTATACTGATTTTCTTGAT GACCAGGTTGTTTTTACTGGCTTTGCCTATGGTGGTCTGTCAGAATTATCTGAAGCTGAG TATACTTCATGCTCAATGGGTTCGACCATAGCAGGAGAAATTGGCACTTTTGGCTACAGA CCTTCTGTCTTGATGGACATGCTTGCTGGCAAGAGAGCCGAAGTTGGTACAAAAGTGGGG GCCTACATGAGAACATTTTCTGGCGATTGCTCACCTTCAGATCTTGAGACAGCTTTGCAG CTTGTTTATCAACTATTTACAACAAATGTGGAGCCAAGGGAGGAAGAAGTAAAAATAGTG ATGCAAATGGCAGAGGAAGCAATCTATGCTCAAGAGCGCGATCCATACACAGCATTTGCG AATCGTGTTCGTGAAATAAATTATGGGAACTCATACTTTTTTAAGCCAATTAGAATAAGT GACTTGAAGAAAGTGGATCCAATCAGAGCGTGTGAATATTTCAACAATTGTTTCAAGGAT CCATCAGCTTTTACGGTGGTAATAGTTGGAAAAATAGACCCAGCCATCTCACTTCCACTG GTTCTGCAGTACTTGGGTGGAATACCTAGGGTACAGGATGCTACTCAACCACTTAGTCGT GATGATCTAAGAGGATTGCCATTTAAGTTTCCTGCAACCATCATTAGAGAAGTTGTCCGC AGCCCTATGGTTGAAGCACAGTGCTTTGTACAACTAGCATTTCCTGTTGTTCTTAAGAAC ACAATGATGACTGAAGATATTCACTATGTTGGGTTTCTTAGTAAACTTCTGGAAACAAAA ATCATGCAAGTACTTCGCTTCAAATATGGGCAGATCTATTCAGTTAATGTAGCTGTCTTC TTGGGGGGCAACAAACCCTCAAGAACTGGAGATGTTCGTGGAGATATAAGCGTGAATTTC TCATGTGATCCAGACATATCATCTAAACTGGTTGATTTTGTTCTGGAGGAGATATCATGC CTACAAACAGAAGGTCCTTCTGAAGAAGATGTATTGTCCATCCTCGAAATTGAACAAAGA GCTCATGAAAATGGATTACAGGTTTAG

Peptide Sequence

PEP ID	Zm00001d044498_P012
PEP Infomation	pep chromosome:B73_RefGen_v4:3:229727235:229748483:-1 gene:Zm00001d044498 transcript:Zm00001d044498_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc protease PQQL-like
Sequence	MDLLPPPTDAPDAGGPSAGGSGRGLRRGIGFRSLKLVSVAMDETLPVDPVGATYGRLANG LTYYVRSNPKPRMRAALSLAVKVGSVVEEEDERGVAHIVEHLAFSATARYTNHDIVKFLE SIGAEFGACQNALTSSDETIYELLVPVDKPGLLSQAISVLAEFSSEVRVSAEDLEKERGA VLEEYRGGRNAAGRMQDSHWALLFDGSKYAERLPIGTEKVIRTVTHETVKRFYQKWYHLS NMAVFAVGDFPDTQAVVELINEHFGHKAPAPHPPPVIPEFSVPSHEEPRFSCFVESEAAG SAVVISCKMPAGGIKTVKDYKDSLAESMFHCALNQRLFKISRRKDPPYFSCSSAADALVC PVKAYIMTSSCRERGTVEALESMLLEVARVRLHGFSDREISIVRALMMSEMESAYLERDQ MQSTSLRDEFLQHFLREEPVVGIEYEAQLQKTLLPHISSAEVAKFAENFSTASSCVIKIV EPRAHASLEDLKAVVLKVNSMEEDKSIFPWDEEQIPEEIVAQAPEPGTIIAKVEHPGIGA TEMILSNGMRICYKYTDFLDDQVVFTGFAYGGLSELSEAEYTSCSMGSTIAGEIGTFGYR PSVLMDMLAGKRAEVGTKVGAYMRTFSGDCSPSDLETALQLVYQLFTTNVEPREEEVKIV MQMAEEAIYAQERDPYTAFANRVREINYGNSYFFKPIRISDLKKVDPIRACEYFNNCFKD PSAFTVVIVGKIDPAISLPLVLQYLGGIPRVQDATQPLSRDDLRGLPFKFPATIIREVVR SPMVEAQCFVQLAFPVVLKNTMMTEDIHYVGFLSKLLETKIMQVLRFKYGQIYSVNVAVF LGGNKPSRTGDVRGDISVNFSCDPDISSKLVDFVLEEISCLQTEGPSEEDVLSILEIEQR AHENGLQV

Transcript Sequence

Transcript ID	Zm00001d044498_T012
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:229727235:229748483:-1 gene:Zm00001d044498 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc protease PQQL-like
Sequence	AGCGCGGCACCGGCACCTGCCACCAGCGGCCATGGATCTGCTCCCGCCGCCGACGGACGC GCCGGATGCCGGCGGCCCCAGCGCCGGCGGGTCAGGCCGGGGGCTGCGCCGCGGGATCGG GTTCCGGTCGCTGAAGCTGGTCAGCGTTGCCATGGACGAGACCCTGCCCGTCGACCCCGT CGGCGCCACCTACGGCCGCCTCGCCAACGGCCTCACCTACTACGTCCGCTCAAACCCAAA GCCACGCATGCGCGCCGCGCTCTCGCTTGCCGTCAAGGTCGGGTCGGTGGTAGAGGAGGA GGACGAGCGCGGTGTGGCGCACATCGTTGAGCACCTCGCCTTCAGCGCCACCGCGCGATA TACCAACCACGACATCGTCAAGTTCCTCGAGAGCATAGGGGCCGAGTTCGGTGCCTGCCA GAACGCGCTCACCTCATCGGATGAGACTATTTACGAGCTGCTCGTACCCGTCGACAAGCC AGGCCTGCTCTCCCAGGCTATATCTGTCCTCGCAGAGTTCAGCTCAGAGGTTAGGGTGTC AGCAGAGGATCTGGAGAAAGAGAGGGGTGCTGTGCTGGAGGAGTACAGGGGTGGACGCAA TGCAGCAGGCCGGATGCAGGACTCCCACTGGGCACTGTTGTTTGATGGTTCTAAGTATGC AGAGCGCCTGCCAATTGGTACTGAGAAGGTGATACGAACTGTTACACATGAGACCGTGAA GCGGTTTTATCAGAAGTGGTACCATCTAAGCAATATGGCGGTATTTGCAGTGGGTGATTT CCCAGATACACAGGCTGTCGTGGAGTTGATAAATGAGCATTTTGGGCACAAAGCTCCAGC TCCCCACCCTCCTCCAGTTATACCAGAATTTTCAGTTCCATCGCATGAGGAACCACGCTT TTCATGTTTTGTGGAATCTGAAGCTGCAGGGTCGGCTGTTGTTATCAGCTGCAAGATGCC TGCTGGTGGAATTAAAACAGTAAAGGACTACAAAGATTCACTGGCAGAGTCCATGTTTCA TTGTGCGCTAAACCAGAGGCTCTTCAAAATATCTCGTAGAAAGGATCCTCCTTATTTTTC TTGCTCCTCAGCTGCAGATGCTCTCGTCTGTCCAGTTAAGGCTTACATTATGACATCTAG TTGTCGGGAAAGGGGAACAGTTGAAGCTCTCGAGTCCATGCTTCTTGAGGTTGCTAGGGT ACGGCTTCATGGATTTTCTGACCGTGAGATATCCATTGTACGCGCCCTAATGATGTCAGA GATGGAATCTGCATATTTGGAGCGTGATCAAATGCAATCTACCAGCTTACGGGATGAGTT TTTGCAGCATTTTCTTCGTGAGGAACCTGTTGTTGGGATTGAATATGAAGCACAGTTACA AAAGACTCTTCTTCCCCATATTTCTTCTGCGGAAGTGGCAAAATTTGCAGAAAACTTTTC AACGGCCAGCAGCTGTGTTATCAAGATAGTTGAACCTCGAGCTCATGCTTCTTTGGAGGA TCTGAAAGCAGTTGTGCTGAAAGTCAACAGTATGGAAGAAGATAAATCTATTTTTCCATG GGATGAAGAACAAATTCCAGAAGAAATTGTTGCCCAAGCTCCAGAGCCAGGGACTATAAT TGCTAAAGTGGAGCACCCAGGCATAGGTGCTACTGAGATGATACTTTCAAATGGCATGCG GATTTGTTACAAGTATACTGATTTTCTTGATGACCAGGTTGTTTTTACTGGCTTTGCCTA TGGTGGTCTGTCAGAATTATCTGAAGCTGAGTATACTTCATGCTCAATGGGTTCGACCAT AGCAGGAGAAATTGGCACTTTTGGCTACAGACCTTCTGTCTTGATGGACATGCTTGCTGG CAAGAGAGCCGAAGTTGGTACAAAAGTGGGGGCCTACATGAGAACATTTTCTGGCGATTG CTCACCTTCAGATCTTGAGACAGCTTTGCAGCTTGTTTATCAACTATTTACAACAAATGT GGAGCCAAGGGAGGAAGAAGTAAAAATAGTGATGCAAATGGCAGAGGAAGCAATCTATGC TCAAGAGCGCGATCCATACACAGCATTTGCGAATCGTGTTCGTGAAATAAATTATGGGAA CTCATACTTTTTTAAGCCAATTAGAATAAGTGACTTGAAGAAAGTGGATCCAATCAGAGC GTGTGAATATTTCAACAATTGTTTCAAGGATCCATCAGCTTTTACGGTGGTAATAGTTGG AAAAATAGACCCAGCCATCTCACTTCCACTGGTTCTGCAGTACTTGGGTGGAATACCTAG GGTACAGGATGCTACTCAACCACTTAGTCGTGATGATCTAAGAGGATTGCCATTTAAGTT TCCTGCAACCATCATTAGAGAAGTTGTCCGCAGCCCTATGGTTGAAGCACAGTGCTTTGT ACAACTAGCATTTCCTGTTGTTCTTAAGAACACAATGATGACTGAAGATATTCACTATGT TGGGTTTCTTAGTAAACTTCTGGAAACAAAAATCATGCAAGTACTTCGCTTCAAATATGG GCAGATCTATTCAGTTAATGTAGCTGTCTTCTTGGGGGGCAACAAACCCTCAAGAACTGG AGATGTTCGTGGAGATATAAGCGTGAATTTCTCATGTGATCCAGACATATCATCTAAACT GGTTGATTTTGTTCTGGAGGAGATATCATGCCTACAAACAGAAGGTCCTTCTGAAGAAGA TGTATTGTCCATCCTCGAAATTGAACAAAGAGCTCATGAAAATGGATTACAGGTTTAGTT GAATCTGTAATGCTCTAATTAGTGCTGATGCAAATGGGTAGTTAATACTTTAGTTACAGC TCTTTGCATCTTTTACAAATTGCAGGAGAATTACTTCTGGTTGGATCGTATTCTACGGAG CTATCAATCAAGGCTTTTTTCTGGAGATATTGGATCCACCTTTGCGTTCCAAGAGGAGGG GCGTATAAAGGTTAGGGATGCTTTGACACCACAGAGCATGCAATCAGCCTTGCAACGAGT TATACCTTTCCCTTGCAGAAAGCAGTACACTGTGGTTATTCTTATGCCAAAGTCATCCTG TTGGGCGTCAGTGAAGTCAATGCTTAGCTGGAGTTCTAATGGGGTCAGCAGAGATGCTAA GATCCTCGCTGGCATGGCTGGTGCACTGGTGTTGGCAGTGAGTTTGTGGAGGTACTCTCG TAGTTCGTTAAAATCTTAGTGTTTGATACAACTGACCGCTTTTTGGGGACTTCCAGTCAG ATCTGAAAATGGATCAGGTTAGGAACTGATACGAGCTGTCGGTAGATAGATATTTGTTCT ACCTGAGCACCGACCCGGTGTTCGGAGATCTGGTAACAAAAGAGGCCATACTATGACAAA TTTGGTAGCTAACAGATTCGTTGCCGCATGTGTGCGTGCAGTCCTGTAATCTCATTCGTT GTACCGCGGCACATGTGCATTAGTCGTCGGTGTATAGTAATGACTATCCTCCCATTTGAT TTCATAGGCAGGACTGAAGTAGTGGTCACTGACCACCGTGGCGGGACGGTCGAAACTGGA AACCCAACATTGTGATAGCTTTACTGGTCCAATTTCTGTGGACGGCTTTGTACCTGTACG TTTTTCCGTTTCCTATGACCCAGAACGAGGAAAAATCTATAATGAGCAGGAAATGTGATA TT