Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d044480_T008
CDS Infomation

cds chromosome:B73_RefGen_v4:3:229381350:229383562:1 gene:Zm00001d044480 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting-associated protein 32 homolog 1
Sequence

ATGGCATTTACTCTTGATATGCTGGAGAAGAAAGAGAAGGTGCTGGACAAAAAAGCAGCC
GCTGAGCTTGAGAGAGCCAAGGAGTTCTCCAAAGCTAAGAATAAAAGAGCGGCTATCCAA
TCCTTGAAGAGGAAAAAACTTTATGAACAACAAATTGAGCAACTCGGAAATTTTCAGTTG
AGAATTCATGATCAGATGATCATGTTAGAAGCAGCTAAAGCTACAACAGAGACTGTTGAT
GCGTTGAGAACTGGAGCTGCAGCTATGAAAGCAATGCAAAAAGCAACAAACATTGATGAT
GTCGACAAGACCATGGATGAAATTAATGAACAGACTGAAAATATGAAACAAATTCAAGAT
GCTTTGTCAACTCCTCTTGGAGCTTCTGCTGATTTTGACGAGGATGAACTGGAAGCGGAA
CTTGAAGAACTGGAAGGAGCAGAGTTGGAATCTCAGCTTCTGGAGCCTGTTGCAGCTCTT
CCTGTGCATCCAGTGCATGTCCCAGGCAACAAGCAACCAGCTCGCCCTGCTCCACAGAAA
GCTACAGCTGAAGATGATGAGCTTGCTGCACTGCAAGCTGAAATGGCACTGTGA

Peptide Sequence

PEP ID

Zm00001d044480_P008
PEP Infomation

pep chromosome:B73_RefGen_v4:3:229381350:229383562:1 gene:Zm00001d044480 transcript:Zm00001d044480_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting-associated protein 32 homolog 1
Sequence

MAFTLDMLEKKEKVLDKKAAAELERAKEFSKAKNKRAAIQSLKRKKLYEQQIEQLGNFQL
RIHDQMIMLEAAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEINEQTENMKQIQD
ALSTPLGASADFDEDELEAELEELEGAELESQLLEPVAALPVHPVHVPGNKQPARPAPQK
ATAEDDELAALQAEMAL

Transcript Sequence

Transcript ID

Zm00001d044480_T008
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:229381350:229383562:1 gene:Zm00001d044480 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting-associated protein 32 homolog 1
Sequence

AACTTCATCTCAACTTGTGGGATGCTTAAGTTCTTCCATGGCATTTACTCTTGATATGCT
GGAGAAGAAAGAGAAGGTGCTGGACAAAAAAGCAGCCGCTGAGCTTGAGAGAGCCAAGGA
GTTCTCCAAAGCTAAGAATAAAAGAGCGGCTATCCAATCCTTGAAGAGGAAAAAACTTTA
TGAACAACAAATTGAGCAACTCGGAAATTTTCAGTTGAGAATTCATGATCAGATGATCAT
GTTAGAAGCAGCTAAAGCTACAACAGAGACTGTTGATGCGTTGAGAACTGGAGCTGCAGC
TATGAAAGCAATGCAAAAAGCAACAAACATTGATGATGTCGACAAGACCATGGATGAAAT
TAATGAACAGACTGAAAATATGAAACAAATTCAAGATGCTTTGTCAACTCCTCTTGGAGC
TTCTGCTGATTTTGACGAGGATGAACTGGAAGCGGAACTTGAAGAACTGGAAGGAGCAGA
GTTGGAATCTCAGCTTCTGGAGCCTGTTGCAGCTCTTCCTGTGCATCCAGTGCATGTCCC
AGGCAACAAGCAACCAGCTCGCCCTGCTCCACAGAAAGCTACAGCTGAAGATGATGAGCT
TGCTGCACTGCAAGCTGAAATGGCACTGTGATCAGGTTTCCACTGAAGAGGTGAAATGTG
TATATGAATTGCGTTATGCTGAAAGCTGAGTCAGGCTTTATTGTATTTGCCATGTGTGTA
TAATCTTGGTGGATATTTGGCAACCGTCAACCGAAGCAGCGAAAGGCCGCTACAGCCGGT
ATTTGTTTCAGTGATTGGGCTCTGTTTTCTTTCCACAGACAATTTAGTTAATGTCGCCCG
GTTAGGTCTATGCTAACTATTCAGGTCACCAACGTGCATTGTTTGTCACAGTATTTTTCA
GTTACCCATATTGTTTGGAGCCATGTAAGAGTGTTGGAACGTTTAAAGCCTCAGGGTTCA
TATTTGATGTGACGGAGGGAGTATTACATAAAGTCAGTTGTTCGGATTTGCAGCTGTAAT