Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d044479_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:3:229347725:229352050:1 gene:Zm00001d044479 gene_biotype:protein_coding transcript_biotype:protein_coding description:TPR repeat-containing thioredoxin TTL1
Sequence	ATGCGCGGCGCCGGCATGGCCCCCGCCAGGAGCAGCATTGACTCCTCTTCGTTCCTCGGA CACTCCTCGAGGTCGCCGGCAAGCTTTCCGGCAAGCAGTGGGAGCCTCCAGGAGGTGACC CGCTTGGGGAACGAGTGGTACAAAAAGGGTAAGTACGGGGAGGCACTGCGGCACTACGAG CGCGCCGTGGCGCTGTGTCCCGAGAGCGCCGCATGCCGCGGCAACCGCGCGGCCGCGCTC ATAGGACTCGGTCGCCTTGCCGACGCGCTTCGTGAATGCGAGGAGGCTGTCCGACTCGAC CCGGCCAGCGGCCGCGGCCACAGCCGCGTCGCAGGCATTTGCCTCCGATTGGGGATGATT GACAAGGCGCGGAGGCACTTCACCCAGGCGGGTCATCTTCAGCAGTCAGACCCCACCGAC TGGCAGAAGCTGCAGGAGGTGGAGGTGCATCTGGGAAGATGCACAGATGCAAGGAAAATT GGGGATTGGAAGAGCACGCTGAGGGAGGCTGATGCTGCCATTGCTGCTGGTGCTGACTCC TCTCAGTTGCTTCTTGCCTTGAGGTCAGAAGCACTTCTCCACCTTCACAAGCTGGAGGAG GCTGAGTCGACTCTTGCGAGCTTTCTGAAATTGGACAGTGCATTGCCCTCATCATTGACA GCAGCAGAACTCTCGGGCATGCTTGCTGAGTCATACGTACATATTGTTCGAGCGCAGATT GACATGGCATTGGGGAGGTTTGATGCTGCTGTTGCTGCAGCTGAGAAGGCTAGAGATCTT GATCCCGGGAATGCAGAAATCGGGATGGTTTTGAATAACGTGAGACTAGTTGCAAAAGCC AGAGAGCAAGGAAATGATCTCTTCAAAGCTGCCAAGTTTTCAGATGCATCCATGGCTTAT GGTGAAGGGCTCAAGTATGATCCCTCAAATTCAGTGCTCCACTGCAATCGAGCTGCTTGT TGGTCAAAGCTAGAAAAGTGGGAAAAGGCTGTTGATGACTGCAATGAGGCACTAAGAATA CAACCAAGCTATACAAAAGCTCTCTTAAGGCGAGCTGCATCATATGCTAAGCTTGAGCGT TGGGTGGATTGTGTGCGGGACTATGAGGCGCTTCGGAAGGAGCTTCCCAGTGACAAGGAG GTTGCTGAGGCATTGTTCCATGCTCAAATTTCCTTGAAGGCGACTCGTGGTGAGGATGTA TCAAATATGAAGTTTGGAGGAGAGGTAGAGATAGTTTCCAGTGTAGAGCAACTCCGTGCT GCCATAAGTTCACCTGGGGTATCTGTTGTCTACTTCATGTCGGCAATGAATCAGCAGTGC ACACAAATTACACCTTCAGTCAACACTCTATGCACTGAATGCCCCTCGGTGAATTTTCTC AAGGTTAACATCGACAGCAGCCCAATGGTGGCAAAGGCAGAGAACGTGCGGATAGTCCCG ACGTTCAAGATATACAAAGGAGGGGTGAAGGTGAAGGAGATGATCTGCCCGAGCTTGCAT GTTCTGCGCTACTCCGTGCGGCACTATTCTGTATCCAGTTCTTGA

Peptide Sequence

PEP ID	Zm00001d044479_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:3:229347725:229352050:1 gene:Zm00001d044479 transcript:Zm00001d044479_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:TPR repeat-containing thioredoxin TTL1
Sequence	MRGAGMAPARSSIDSSSFLGHSSRSPASFPASSGSLQEVTRLGNEWYKKGKYGEALRHYE RAVALCPESAACRGNRAAALIGLGRLADALRECEEAVRLDPASGRGHSRVAGICLRLGMI DKARRHFTQAGHLQQSDPTDWQKLQEVEVHLGRCTDARKIGDWKSTLREADAAIAAGADS SQLLLALRSEALLHLHKLEEAESTLASFLKLDSALPSSLTAAELSGMLAESYVHIVRAQI DMALGRFDAAVAAAEKARDLDPGNAEIGMVLNNVRLVAKAREQGNDLFKAAKFSDASMAY GEGLKYDPSNSVLHCNRAACWSKLEKWEKAVDDCNEALRIQPSYTKALLRRAASYAKLER WVDCVRDYEALRKELPSDKEVAEALFHAQISLKATRGEDVSNMKFGGEVEIVSSVEQLRA AISSPGVSVVYFMSAMNQQCTQITPSVNTLCTECPSVNFLKVNIDSSPMVAKAENVRIVP TFKIYKGGVKVKEMICPSLHVLRYSVRHYSVSSS

Transcript Sequence

Transcript ID	Zm00001d044479_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:229347725:229352050:1 gene:Zm00001d044479 gene_biotype:protein_coding transcript_biotype:protein_coding description:TPR repeat-containing thioredoxin TTL1
Sequence	GAGGATATCCTTCAATACATCCACCTCACGAGGAATCCGCACTCGCGTTTGCTCCGCAAT TTATTGCTCAGGGTTCTTGCTGGGTGGTGGTGGCGGCGGGTGGTGCAAGCAGTACTCGTT CACAAGAGCAAGCTGTTTTTGTGTGCGTGGTTTTATGCCTGCTTGCTTGGCGAGGGGAAG AGGAGGCGGCGGAGTACTGGGAGTTGAAGGGTGCAGGTACCGGCATTGCTGAGGCGGCGT GGGGAGATCCGGCGATGTCGGAGGCCGACCGGATACGCCACCGCGCTCCCGCCCGGACGT GCTCGGATCCGGCACCGGCCACTATGGCCACGGAAGCATCATGCGCGGCGCCGGCATGGC CCCCGCCAGGAGCAGCATTGACTCCTCTTCGTTCCTCGGACACTCCTCGAGGTCGCCGGC AAGCTTTCCGGCAAGCAGTGGGAGCCTCCAGGAGGTGACCCGCTTGGGGAACGAGTGGTA CAAAAAGGGTAAGTACGGGGAGGCACTGCGGCACTACGAGCGCGCCGTGGCGCTGTGTCC CGAGAGCGCCGCATGCCGCGGCAACCGCGCGGCCGCGCTCATAGGACTCGGTCGCCTTGC CGACGCGCTTCGTGAATGCGAGGAGGCTGTCCGACTCGACCCGGCCAGCGGCCGCGGCCA CAGCCGCGTCGCAGGCATTTGCCTCCGATTGGGGATGATTGACAAGGCGCGGAGGCACTT CACCCAGGCGGGTCATCTTCAGCAGTCAGACCCCACCGACTGGCAGAAGCTGCAGGAGGT GGAGGTGCATCTGGGAAGATGCACAGATGCAAGGAAAATTGGGGATTGGAAGAGCACGCT GAGGGAGGCTGATGCTGCCATTGCTGCTGGTGCTGACTCCTCTCAGTTGCTTCTTGCCTT GAGGTCAGAAGCACTTCTCCACCTTCACAAGCTGGAGGAGGCTGAGTCGACTCTTGCGAG CTTTCTGAAATTGGACAGTGCATTGCCCTCATCATTGACAGCAGCAGAACTCTCGGGCAT GCTTGCTGAGTCATACGTACATATTGTTCGAGCGCAGATTGACATGGCATTGGGGAGGTT TGATGCTGCTGTTGCTGCAGCTGAGAAGGCTAGAGATCTTGATCCCGGGAATGCAGAAAT CGGGATGGTTTTGAATAACGTGAGACTAGTTGCAAAAGCCAGAGAGCAAGGAAATGATCT CTTCAAAGCTGCCAAGTTTTCAGATGCATCCATGGCTTATGGTGAAGGGCTCAAGTATGA TCCCTCAAATTCAGTGCTCCACTGCAATCGAGCTGCTTGTTGGTCAAAGCTAGAAAAGTG GGAAAAGGCTGTTGATGACTGCAATGAGGCACTAAGAATACAACCAAGCTATACAAAAGC TCTCTTAAGGCGAGCTGCATCATATGCTAAGCTTGAGCGTTGGGTGGATTGTGTGCGGGA CTATGAGGCGCTTCGGAAGGAGCTTCCCAGTGACAAGGAGGTTGCTGAGGCATTGTTCCA TGCTCAAATTTCCTTGAAGGCGACTCGTGGTGAGGATGTATCAAATATGAAGTTTGGAGG AGAGGTAGAGATAGTTTCCAGTGTAGAGCAACTCCGTGCTGCCATAAGTTCACCTGGGGT ATCTGTTGTCTACTTCATGTCGGCAATGAATCAGCAGTGCACACAAATTACACCTTCAGT CAACACTCTATGCACTGAATGCCCCTCGGTGAATTTTCTCAAGGTTAACATCGACAGCAG CCCAATGGTGGCAAAGGCAGAGAACGTGCGGATAGTCCCGACGTTCAAGATATACAAAGG AGGGGTGAAGGTGAAGGAGATGATCTGCCCGAGCTTGCATGTTCTGCGCTACTCCGTGCG GCACTATTCTGTATCCAGTTCTTGAGAAGCTTTAGGTACCGGTACCCCAATTTCCCATTT TTCACTAATGCATAGAGCTCCCCGTCAAACTTGCAAACACCACTAGCAGCCTCCAGAACA TTTTCACCACCAGCATAACTACTCCCCTCCCCTATTGAGCATGAGCATAACGGGCTAAGA CTGTCTGGTGGAAGAGCCCCCCCTCAATTCCCCACCTCTCCTGTCAATTTCGCCTTTTCA CCGTTCATATACCAACCCATTCAATTCAATATCTTTGTTCATGTTCCGGGCTCTCTCCAC CTCAATTTGTACTTTGAATACTCCATTTGGATTCACCTCATCATAGTCCATAGGCCAGTA CCCTGCTTCTCAAGGAAAAGGGAAATGTTTGTAATGTCGTGTAGGGTTTAGCGGTAGCGT CTATCCATTAGGGGAGGGGGACGGCGGGAGCCTGGGGGGTTGTAGTTTTTCGTTACATGT ACATACCTTATAGGAAAAAAACATGAGATAAATCCATTGGAAGATTTGTTCCCTGGAGAA AAGAGAAATGGTGGCATCGGATTGAGATGAGATTTTGGCGGTTGGGGTCAGGTAACAGAG CTACTAGCTGTTTTGAGTTCCTATTAGTCTTTATCTACCTATATCTATCTTTAGAGGGAG AGAGAGAGAGAGAGGTGTTAAGTTAACTGATGATGCAGACATGGTTTGGTGTCCATTGAA GACGATGATGTCATGTCCTTTTGCTGCTTCTGTTGGTTTTATGGCGCTGATGATACCATA TATATGCTACCATTTCCATGAATAAAAAAAAAACATTGCAACATTCGTTCGTTTTTTTGG CTGTTGTTTCT