Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d044432_T024
CDS Infomation

cds chromosome:B73_RefGen_v4:3:227759411:227771661:-1 gene:Zm00001d044432 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcriptional corepressor LEUNIG
Sequence

ATGAAGAGAAATTTGCAGGCAACTGCAAAGGCCTTCCAAGCAGAAGGAAAGGTCTCTTCA
GATCCAGTTGCCATTGATGCACCCGGTGGCTTTCTTTTCGAGTGGTGGTCGGTTTTCTGG
GATATATTCATAGCAAGAACTAACGAGAAGCATTCAGATGTTGCAGCCTCATATATTGAG
ACTCAGCTCATGAAGGCCAGGGAGCAACAGCAGCCACAAACACCTCAACAGAGGCAGCAG
CAACCACAGCATATACAAATGCAACAAATGCTGTTACAAAGAGCTGTGCATCAGCAGCAA
CAGCAGCAACAGCAGCAGCAGCAACAACAACAACAACAACAACAACAACCTCAGCAGCAG
CAGCAGCTGCAACAGCAGCGCAGAGATGGTTCTCATCTTCTCAATGGTTCTGCGAATGGA
ATTTCTGGAAACAATCCTTTAATGCGACAAAACCAAAGTACTGCAAATGTTATGGCAACA
AAAATGTATGAGGAAAGGTTAAAGGTACCTTCCCAGAGAGACTCTTTCGAAGAGGCATCA
TTGAAGCAAAGATACGGAGAGAACGCTGGGCAACTACTTGATTCAAATGAAGCATCATTG
TTGAAAGCAGCTTCAAGTGCACAATCCTCAGGGCAAATTTTGCATGGAACTGTTGGTGGC
TTATCAGGCACTCTGCAACAAGTTCAGGCCAGGAGCCCCCAACTTCCTGGGCCTGCTCAG
GGTATCAAGACAGAGATTAATCACGTTCTGACTCCCAGAGGTGCAGGCCCAGAAGGGTCA
TTTATAGGTGTCCAAGGATCTAATCAAGCTGGGAACAATTTGACTCTGAAAGGATGGCCA
CTCACGGGACTTGAGCAACTTAGGTCAGGAATTCTTCAGCAGAAGTCATTTATACAGAAT
CAACAGCAATTGCACCAGCAAATCCAGATGCTGACTCCACAGCAGCAGCAGCAGCTTATG
CTGCAGGCTCAGCAAAATATGTCTTCACCAACATCTAGTGACGTCGACAACAGAAGATTG
AGGATGATGCTAAATAGAAATGCTGTTCTTGGCCGGGATGGACAGACAAATAGTGGTAGT
GATATTATTCCAAATATTGGCTCTCCTAGTCAAAGTGGCGGAGATATAGATATGCTTATA
AAGAAGAAACTTGCTCAGCAGCAGCAACTATTACAACAGCAAAGCAATAGCCAACAGCTC
CCACAGCAACATCAGCTTCAGCAACCTGCTGTCTCTAGCCAGCAATCTCAAAGTTCAAAT
CAACATCTTCAACAAGAAAAACTAGGAATTGGAAGTATGCCTGTTGATGGGGGCATACCA
AACTCATTTGGGGGAGCTGAACAGACAGCGAAAAAGAGAAAGAAGCCAGGCTCATCCTCT
GGTAGAGCCAATAGTTCAGGCACAGCCAATACTGCTGGTCCCTCTCCAAGTTCTGCACCC
TCGACACCTTCCACTCATACACCAGGAGATGCAATGTCTGTGCCACAGCTGCAGCAGAAT
GGCGGTTCAGCTAAACCCATGGTAATGTTTGGCTCTGATGGAACTGGGAGCTTGACATCT
CCAGCAAACCCATTGGATGATGTGGACCGTTTGCTGGAAGATGGCTCATTGGATGATAAT
GTTGAATCTTTTCTATCACAGGATGACATGGATCCTAGGGACAACTTGGGGCGATGCATG
GATGCTAGCAAAGGTTTTGGTTTTTCTGAGGTTGCCAAAGCACGTGCAAGTGCAGCCAAA
GTTGTCTGTTGCCACTTCTCAGCTGATGGTAAGCTGCTTGCTACTGGTGGTCATGATAAA
AAGGTTACTTTGTGGTGTACAGATTCTCTGAAGCCTAAATCCTTCCTGGAAGAGCACTCG
TTTCTTATCACTGATGTTAGATTTAGCCCAAGCATGTCGCGCCTTGCAACATCCTCCTTC
GACAAAACTGTGCGGGTTTGGGATGCAGATAACACTGACTATTCACTCCGAACTTTCACG
GGCCATTCAGCATCTGTCATGTCACTTGATTTTCATCCAAACAAAGAGGATATGATATGC
TCCTGTGATGGTGATGGGGAAGTGCGCAGCTGGAGCATAAATAATGGTAGCTGTTTGACA
TGTGTTAAGGTGTTTAAGGCAGGTGCTACTCAGATGAGATTTCAACCTCGTAAGGGAAAG
TATCTAGCAGCTGCCTCAGAGAAAGCAATCTACATACTTGATGGGGAGACACAACATGCT
TGTAGAAGCCCCTTGCAGGGGCACAATAAGAATATTCAATCGCTTTGTTGGGACTCTGCT
GGTGAATATCTGGCTTCTGTCAGTGAAGACTCAGTCAGAATATGGTCATTCAGTTCTGGA
CGTGATGGTGAATTTGTGCACGAATTGAATCGCAGTGGAAATCAGTTCCACTCATGTGTT
TTCCACCCAACTTATCAATCCTTGTTAGTGATTGGTTGTTACGAGTCCTTGGAACTTTGG
GACATAAGGGAGAAGAACACCATGACCTTCAACAATGCGCATGACGGTTTGGTTGCAGCC
CTGGCAGCATCCAGTGCAACAGGGAAGGTTGCCTCAGTAAGCCATGATAGGACTCTCAAG
CTCTGGAAATGA

Peptide Sequence

PEP ID

Zm00001d044432_P024
PEP Infomation

pep chromosome:B73_RefGen_v4:3:227759411:227771661:-1 gene:Zm00001d044432 transcript:Zm00001d044432_T024 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcriptional corepressor LEUNIG
Sequence

MKRNLQATAKAFQAEGKVSSDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSDVAASYIE
TQLMKAREQQQPQTPQQRQQQPQHIQMQQMLLQRAVHQQQQQQQQQQQQQQQQQQQPQQQ
QQLQQQRRDGSHLLNGSANGISGNNPLMRQNQSTANVMATKMYEERLKVPSQRDSFEEAS
LKQRYGENAGQLLDSNEASLLKAASSAQSSGQILHGTVGGLSGTLQQVQARSPQLPGPAQ
GIKTEINHVLTPRGAGPEGSFIGVQGSNQAGNNLTLKGWPLTGLEQLRSGILQQKSFIQN
QQQLHQQIQMLTPQQQQQLMLQAQQNMSSPTSSDVDNRRLRMMLNRNAVLGRDGQTNSGS
DIIPNIGSPSQSGGDIDMLIKKKLAQQQQLLQQQSNSQQLPQQHQLQQPAVSSQQSQSSN
QHLQQEKLGIGSMPVDGGIPNSFGGAEQTAKKRKKPGSSSGRANSSGTANTAGPSPSSAP
STPSTHTPGDAMSVPQLQQNGGSAKPMVMFGSDGTGSLTSPANPLDDVDRLLEDGSLDDN
VESFLSQDDMDPRDNLGRCMDASKGFGFSEVAKARASAAKVVCCHFSADGKLLATGGHDK
KVTLWCTDSLKPKSFLEEHSFLITDVRFSPSMSRLATSSFDKTVRVWDADNTDYSLRTFT
GHSASVMSLDFHPNKEDMICSCDGDGEVRSWSINNGSCLTCVKVFKAGATQMRFQPRKGK
YLAAASEKAIYILDGETQHACRSPLQGHNKNIQSLCWDSAGEYLASVSEDSVRIWSFSSG
RDGEFVHELNRSGNQFHSCVFHPTYQSLLVIGCYESLELWDIREKNTMTFNNAHDGLVAA
LAASSATGKVASVSHDRTLKLWK

Transcript Sequence

Transcript ID

Zm00001d044432_T024
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:227759411:227771661:-1 gene:Zm00001d044432 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcriptional corepressor LEUNIG
Sequence

GTCTACTTCGAAGGAGATGCAAAATCAAATAAATAAAACTAGTTATGCCAATCTAGCATA
ACTGTATTTTTGAAGACATGGCAATTTCCTGATTCTCTGTCCAATATAGTAATACTATAT
AAATAATTAAATATGCATTCCTTTTATCATAATTCTATATGCTTACTAGCTACCTACTCA
TGTTCTTCTTGAAACATCATCTTATGATTGGATGATTGGTTATTTCCTTCAATCCTGTCT
TTTGACTATTTGGCTACTTCATGAAACAGGCTGGATGTTTACATATATGACTATTTTATG
AAGAGAAATTTGCAGGCAACTGCAAAGGCCTTCCAAGCAGAAGGAAAGGTCTCTTCAGAT
CCAGTTGCCATTGATGCACCCGGTGGCTTTCTTTTCGAGTGGTGGTCGGTTTTCTGGGAT
ATATTCATAGCAAGAACTAACGAGAAGCATTCAGATGTTGCAGCCTCATATATTGAGACT
CAGCTCATGAAGGCCAGGGAGCAACAGCAGCCACAAACACCTCAACAGAGGCAGCAGCAA
CCACAGCATATACAAATGCAACAAATGCTGTTACAAAGAGCTGTGCATCAGCAGCAACAG
CAGCAACAGCAGCAGCAGCAACAACAACAACAACAACAACAACAACCTCAGCAGCAGCAG
CAGCTGCAACAGCAGCGCAGAGATGGTTCTCATCTTCTCAATGGTTCTGCGAATGGAATT
TCTGGAAACAATCCTTTAATGCGACAAAACCAAAGTACTGCAAATGTTATGGCAACAAAA
ATGTATGAGGAAAGGTTAAAGGTACCTTCCCAGAGAGACTCTTTCGAAGAGGCATCATTG
AAGCAAAGATACGGAGAGAACGCTGGGCAACTACTTGATTCAAATGAAGCATCATTGTTG
AAAGCAGCTTCAAGTGCACAATCCTCAGGGCAAATTTTGCATGGAACTGTTGGTGGCTTA
TCAGGCACTCTGCAACAAGTTCAGGCCAGGAGCCCCCAACTTCCTGGGCCTGCTCAGGGT
ATCAAGACAGAGATTAATCACGTTCTGACTCCCAGAGGTGCAGGCCCAGAAGGGTCATTT
ATAGGTGTCCAAGGATCTAATCAAGCTGGGAACAATTTGACTCTGAAAGGATGGCCACTC
ACGGGACTTGAGCAACTTAGGTCAGGAATTCTTCAGCAGAAGTCATTTATACAGAATCAA
CAGCAATTGCACCAGCAAATCCAGATGCTGACTCCACAGCAGCAGCAGCAGCTTATGCTG
CAGGCTCAGCAAAATATGTCTTCACCAACATCTAGTGACGTCGACAACAGAAGATTGAGG
ATGATGCTAAATAGAAATGCTGTTCTTGGCCGGGATGGACAGACAAATAGTGGTAGTGAT
ATTATTCCAAATATTGGCTCTCCTAGTCAAAGTGGCGGAGATATAGATATGCTTATAAAG
AAGAAACTTGCTCAGCAGCAGCAACTATTACAACAGCAAAGCAATAGCCAACAGCTCCCA
CAGCAACATCAGCTTCAGCAACCTGCTGTCTCTAGCCAGCAATCTCAAAGTTCAAATCAA
CATCTTCAACAAGAAAAACTAGGAATTGGAAGTATGCCTGTTGATGGGGGCATACCAAAC
TCATTTGGGGGAGCTGAACAGACAGCGAAAAAGAGAAAGAAGCCAGGCTCATCCTCTGGT
AGAGCCAATAGTTCAGGCACAGCCAATACTGCTGGTCCCTCTCCAAGTTCTGCACCCTCG
ACACCTTCCACTCATACACCAGGAGATGCAATGTCTGTGCCACAGCTGCAGCAGAATGGC
GGTTCAGCTAAACCCATGGTAATGTTTGGCTCTGATGGAACTGGGAGCTTGACATCTCCA
GCAAACCCATTGGATGATGTGGACCGTTTGCTGGAAGATGGCTCATTGGATGATAATGTT
GAATCTTTTCTATCACAGGATGACATGGATCCTAGGGACAACTTGGGGCGATGCATGGAT
GCTAGCAAAGGTTTTGGTTTTTCTGAGGTTGCCAAAGCACGTGCAAGTGCAGCCAAAGTT
GTCTGTTGCCACTTCTCAGCTGATGGTAAGCTGCTTGCTACTGGTGGTCATGATAAAAAG
GTTACTTTGTGGTGTACAGATTCTCTGAAGCCTAAATCCTTCCTGGAAGAGCACTCGTTT
CTTATCACTGATGTTAGATTTAGCCCAAGCATGTCGCGCCTTGCAACATCCTCCTTCGAC
AAAACTGTGCGGGTTTGGGATGCAGATAACACTGACTATTCACTCCGAACTTTCACGGGC
CATTCAGCATCTGTCATGTCACTTGATTTTCATCCAAACAAAGAGGATATGATATGCTCC
TGTGATGGTGATGGGGAAGTGCGCAGCTGGAGCATAAATAATGGTAGCTGTTTGACATGT
GTTAAGGTGTTTAAGGCAGGTGCTACTCAGATGAGATTTCAACCTCGTAAGGGAAAGTAT
CTAGCAGCTGCCTCAGAGAAAGCAATCTACATACTTGATGGGGAGACACAACATGCTTGT
AGAAGCCCCTTGCAGGGGCACAATAAGAATATTCAATCGCTTTGTTGGGACTCTGCTGGT
GAATATCTGGCTTCTGTCAGTGAAGACTCAGTCAGAATATGGTCATTCAGTTCTGGACGT
GATGGTGAATTTGTGCACGAATTGAATCGCAGTGGAAATCAGTTCCACTCATGTGTTTTC
CACCCAACTTATCAATCCTTGTTAGTGATTGGTTGTTACGAGTCCTTGGAACTTTGGGAC
ATAAGGGAGAAGAACACCATGACCTTCAACAATGCGCATGACGGTTTGGTTGCAGCCCTG
GCAGCATCCAGTGCAACAGGGAAGGTTGCCTCAGTAAGCCATGATAGGACTCTCAAGCTC
TGGAAATGACTTGTATGAAACCCATGTTGGACTTCTGTATTCTGGCTGTTAGATGATAGA
CAAACAAGACTTTGCCAAAAATGACCACATGACGAAAAGGTTGCTGACAAGATACTCTGG
AGCCGCGTGGGCTCAAGAACTAACAGTGTTTTGTTTTGTGGTCGTTGTATGCTGTTCAGT
ATGCCACTGAAGCTTGTAACTTGTAACTCGTAATAGAAACTTTGGTTGAAG