Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d044418_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:227499878:227503129:1 gene:Zm00001d044418 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin-conjugating enzyme family protein
Sequence	ATGGCTCAGGCCGCAAGGCTGAATCTGAGAATGCAGAAAGAGATTAAGCTTCTATTGGAT GATCCACCCCATGGGGTTTCTCTTAATCTTTCTGAAGACAAAAATGTCTTGTCATCGTTA TCAAGTATCGAAGCCAAAATTGAAGGACCCGAGGGAACAGTTTATGCCAAGGGAGTTTTC ATTTTGAAGATACAAATTCCTGAAAGGTACCCTTTTCAACCACCGAATGTGACTTTTGTT ACTCCCATTTATCATCCCAATATTGACAATGGAGGACGCATTTGCCTTGATATTCTCAAT TTGCCCCCAAAGGGAGCCTGGCAACCATCACTCAACATTGCTACTGTGTTGACAAGCATT GGCTTGCTGCTAAGTGAGCCAAACCCGGATGATGGGTTGATGGCTGAAATAAGCCGAGAA TACAAATACAATAGACAAGTATTTGACACAACTGCTCAGTTATGGACAGATAAGTATGCT AGTTCTGCTGCTGTTGGTGCTAGCGGTTGGTGTTCTGTAGATGCTGATGTCCTGGCACAG AATACACAGATGGAGGACACAAATAACCTGGGATCACTGCCAAATGTTTCTAAAAAAGTT TGTGAAGGGAATCAAAGGAAGATGCGGTTACTGGGACAAAAGTTATCACTAAAGTATGAA AGATCTGAAGAGAGTATGAAAACTGTCAAGCAAGACCCAGTTGCTAGCTACCTACCATCC ATGGCAGGATCCACTTATCCTACTGCTTGTTTTTCAGATGTTTCAGGCAGAAAGAATGAT ACTTCAGAGAACATGTCTATCAGTACTGATAGTGGAGTGGTTTCAAAGCAAGATCACCAA GGCCATAAAAAGGAATTGCAGTTACCTGGCCAGAGTCTTTTTGTTACCTCAGAAGCCCCT TGCAAAAGCAGCGATGCCAGTGATATGCTATCTAATCATCTTCCAATAGATGCATCTGAT GCTAAAGATCATGTCATGCAATCTTCTGATGGCATTTTAGAGAATAATTCGGCAAGGAGA ATTGGCGGATCATCAGCTAGCGCATATAAAGCACCGGAAGGAAACCGAAGGAATATCAGG GCACTGAAGTTGTCACTGAAATCAGTAAAGCCTGAAAAGAAAAACAACGATCAAAATGAA AATATGGCTCCAAACCATCTGCCTTCACAGTCAAGCTTTAGCTATTTGCAGAAAAGGCCC TTAGATGCTGTTTCAAGGAAAAAATTCGACGGAGGTCCTGCACTGGTTCAACAGAATCCT AACACTGAGCAGAAACCATCGAACACTAACATGGTATCAAATGAAGAGCGCAACCAAGGT CTAAAGATGCTGTGTTCACAACGCAGGAGGCTGTCACTGAAATCGGAGCCGCGGCTGCCT AGAGTAGAAAATGCCTGTGAAAAGGAGACTAAGCGACCCAATAATTTTCCTCTAAGCGAT GAGAAACTCAATGAACTGCCATCATCTGAACCAATCCCCAAAGGTGAACCCGTGGCACCC AGTGAACTCCCATTTTCGGCGCCAGCAGTCCTCAAAAGTCAAACCAGGGCCCTTGGCTCT GCTGGTGGACAGAAAGACTCCAGCTCAGGCAATTCCTGTGTCAATGAAAACACGCTTGCC ATCGAGAATGCTGTTGTTTCAGACAGTGAAGATAGCGCAGACGAGCGTGAAAGGCCCCCA AGATCAAGGCTATCATTGATGCGGAGACGACTGGGTGGAAAGCTGAGGACTTAG

Peptide Sequence

PEP ID	Zm00001d044418_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:227499878:227503129:1 gene:Zm00001d044418 transcript:Zm00001d044418_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin-conjugating enzyme family protein
Sequence	MAQAARLNLRMQKEIKLLLDDPPHGVSLNLSEDKNVLSSLSSIEAKIEGPEGTVYAKGVF ILKIQIPERYPFQPPNVTFVTPIYHPNIDNGGRICLDILNLPPKGAWQPSLNIATVLTSI GLLLSEPNPDDGLMAEISREYKYNRQVFDTTAQLWTDKYASSAAVGASGWCSVDADVLAQ NTQMEDTNNLGSLPNVSKKVCEGNQRKMRLLGQKLSLKYERSEESMKTVKQDPVASYLPS MAGSTYPTACFSDVSGRKNDTSENMSISTDSGVVSKQDHQGHKKELQLPGQSLFVTSEAP CKSSDASDMLSNHLPIDASDAKDHVMQSSDGILENNSARRIGGSSASAYKAPEGNRRNIR ALKLSLKSVKPEKKNNDQNENMAPNHLPSQSSFSYLQKRPLDAVSRKKFDGGPALVQQNP NTEQKPSNTNMVSNEERNQGLKMLCSQRRRLSLKSEPRLPRVENACEKETKRPNNFPLSD EKLNELPSSEPIPKGEPVAPSELPFSAPAVLKSQTRALGSAGGQKDSSSGNSCVNENTLA IENAVVSDSEDSADERERPPRSRLSLMRRRLGGKLRT

Transcript Sequence

Transcript ID	Zm00001d044418_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:227499878:227503129:1 gene:Zm00001d044418 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin-conjugating enzyme family protein
Sequence	GCTGCGGCGCTCCTTTTTCCATCACCAGTTGTTCAACACGCGCGCGCTCCGTCTCTGTTT TCTTTTTCCGAATAACCTGCGCGCTCCCTCCGACTTCCAGCGGTGCGCAGTGGCCTTTCT TTGTGGCTTCCAGCGGCTGTGACTGGGCGAGCGCCGACGCTGCTCTACTACAGCTGCCCA GGTCTTCGTCGGGCACTTTGCCAGCGACGTGCACCAACCAGGGTAGAATTTTCTGCAAAA CCACAAAATGGCTCAGGCCGCAAGGCTGAATCTGAGAATGCAGAAAGAGATTAAGCTTCT ATTGGATGATCCACCCCATGGGGTTTCTCTTAATCTTTCTGAAGACAAAAATGTCTTGTC ATCGTTATCAAGTATCGAAGCCAAAATTGAAGGACCCGAGGGAACAGTTTATGCCAAGGG AGTTTTCATTTTGAAGATACAAATTCCTGAAAGGTACCCTTTTCAACCACCGAATGTGAC TTTTGTTACTCCCATTTATCATCCCAATATTGACAATGGAGGACGCATTTGCCTTGATAT TCTCAATTTGCCCCCAAAGGGAGCCTGGCAACCATCACTCAACATTGCTACTGTGTTGAC AAGCATTGGCTTGCTGCTAAGTGAGCCAAACCCGGATGATGGGTTGATGGCTGAAATAAG CCGAGAATACAAATACAATAGACAAGTATTTGACACAACTGCTCAGTTATGGACAGATAA GTATGCTAGTTCTGCTGCTGTTGGTGCTAGCGGTTGGTGTTCTGTAGATGCTGATGTCCT GGCACAGAATACACAGATGGAGGACACAAATAACCTGGGATCACTGCCAAATGTTTCTAA AAAAGTTTGTGAAGGGAATCAAAGGAAGATGCGGTTACTGGGACAAAAGTTATCACTAAA GTATGAAAGATCTGAAGAGAGTATGAAAACTGTCAAGCAAGACCCAGTTGCTAGCTACCT ACCATCCATGGCAGGATCCACTTATCCTACTGCTTGTTTTTCAGATGTTTCAGGCAGAAA GAATGATACTTCAGAGAACATGTCTATCAGTACTGATAGTGGAGTGGTTTCAAAGCAAGA TCACCAAGGCCATAAAAAGGAATTGCAGTTACCTGGCCAGAGTCTTTTTGTTACCTCAGA AGCCCCTTGCAAAAGCAGCGATGCCAGTGATATGCTATCTAATCATCTTCCAATAGATGC ATCTGATGCTAAAGATCATGTCATGCAATCTTCTGATGGCATTTTAGAGAATAATTCGGC AAGGAGAATTGGCGGATCATCAGCTAGCGCATATAAAGCACCGGAAGGAAACCGAAGGAA TATCAGGGCACTGAAGTTGTCACTGAAATCAGTAAAGCCTGAAAAGAAAAACAACGATCA AAATGAAAATATGGCTCCAAACCATCTGCCTTCACAGTCAAGCTTTAGCTATTTGCAGAA AAGGCCCTTAGATGCTGTTTCAAGGAAAAAATTCGACGGAGGTCCTGCACTGGTTCAACA GAATCCTAACACTGAGCAGAAACCATCGAACACTAACATGGTATCAAATGAAGAGCGCAA CCAAGGTCTAAAGATGCTGTGTTCACAACGCAGGAGGCTGTCACTGAAATCGGAGCCGCG GCTGCCTAGAGTAGAAAATGCCTGTGAAAAGGAGACTAAGCGACCCAATAATTTTCCTCT AAGCGATGAGAAACTCAATGAACTGCCATCATCTGAACCAATCCCCAAAGGTGAACCCGT GGCACCCAGTGAACTCCCATTTTCGGCGCCAGCAGTCCTCAAAAGTCAAACCAGGGCCCT TGGCTCTGCTGGTGGACAGAAAGACTCCAGCTCAGGCAATTCCTGTGTCAATGAAAACAC GCTTGCCATCGAGAATGCTGTTGTTTCAGACAGTGAAGATAGCGCAGACGAGCGTGAAAG GCCCCCAAGATCAAGGCTATCATTGATGCGGAGACGACTGGGTGGAAAGCTGAGGACTTA GTGTCACCGCAGAACTATTTCTATGCTGCGTTGTAAATTCTTGGAAGGCGAGTATTCCAA TTTGCTCAAACAAATTGTGCCTGCGTTTGTGGTAGATCAGGCCCTATAGGTTAGTATATG TGTTAGAGAACTCTGTCGTCCTACAACGTCGTGGAGGGTGCTCTGTTGGTGGTACTCCTT TTGTTGGTAACGAAATTTGAAGAACTAGATTTTTCTTATGCAATTCAGTTTTAGCAGCTG CGTATTGAGCAAGTATTGGTGGTTCTACTTTTTTTTAACCAGATGTTTCCGGAGGGCATG TACAGTGTAGGAATGCTAAGAGAACAGTGGAAGTCTTGTACATGATGGCAAGATCCTT