Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d044393_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:3:226945825:226954001:1 gene:Zm00001d044393 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform
Sequence	ATGACGATGAACGGCGCCGCTGCACCGGAGCGCTCGCCCCCAGCCTCGCCCCCGCCTCTG GTCCAGGCCCAGGCGCCTCCGTCGCCATCTCCGACTCAGCCGCTCGAGTGGAGGTTCTCG CAGGTGTTCGGTGAGCGCAGCGCCGGGGAGGAAGTCCAGGATGTTGACATCATCTCAGCA ATAGAGTTCAATAAATCGGGACATCATCTTGCCACTGGAGACAGGGGTGGACGAGTTGTT TTATTTGAAAGGACTGATGTCAAAGATCATGCCTCTAGAAAAGATGCTGAGAAAGCTGAT TATTCTATCAGCAGGCATCCTGAGTTTCGCTACAAAACTGAGTTTCAAAGCCATGAGCCA GAGTTTGATTACCTCAAGAGCTTGGAAATTGAAGAGAAGATTAACCAAATAAAGTGGTGT CAAGCAACAAATTGTGCATTGTTTCTTCTATCCACAAATGACAAAACGATAAAGTTTTGG AAGGTCCAAGAAAAGAAAGTAAAAAAGGTATCTGAGATGAATTTGGACCGTTCAACTGCT CCTACAAATGGTAGTCCTGGTGGTACGGGATATCTGCGCCCATCTCTCTCAAATGGCAAT GTTCTAAAACCTGGCGGACTTCCTTTGCTACGCCTTCCTGTGGTTACAACCCAAGAAACA AGCCTTGCTGCGAGTTGCCGAAGAGTATATGCTCATGCACATGACTATCATATAAATTCA ATATCAAATAACAGTGATGGTGAGACATTTATATCAGCTGATGATTTGCGGATAAATCTT TGGAATTTGGAAATCAGCAATCAAAGTTTCAATATTATTGATGTTAAGCCTACAAACATG GAAGATCTCACTGAGGTGATAACATCTGCTGAATTCCATCCTACTCATTGCAATACATTG GCGTATAGTAGCTCTAAGGGCTCCATTCGACTTGTTGATCTGCGGCAATCAGCCCTTTGC GACAATCATTCCCAAATCTTTGAGCAGCATGAGGCCCCAGGTTCAAGATCATTTTTCACT GAGATTATAGCTTCAATTTCGGACATAAAATTTTCGAAGGATGGGAGGCATATTCTCAGT CGTGACTACATGACTCTGAAGCTTTGGGATGTTAAGATGAATTCTGGTCCTGTTGCAACA TTCCAGGTTCATGAGTATCTAAGGCCTAAGTTATGTGATTTATATGAAAATGACTCAATT TTCGACAAATTTGAGTGTTGTCAAAGTGGTGATGGATTAAGAGTAGCAACTGGTTCCTAC AGCAACATTTTTCGCGTGTTTGGTTGCCGTTCTGGTAGCAGTGAAGCAACAACACTTGAA GCAACCCGAAACCCTACAAGGCGGCAGGTCCAGACTACCTCTAGAGCTACCAGATCCCTA AGTACTCTGACAAGGGCCGTTAGACGAGGTGGAGAGAGCACTGGAATAGATGCCAATGGA AATTCCTATGATCTGAGCACAAAGTTGCTCCATTTGGCCTGGCACCCATCTGAAAATCTA ATTGCTTGTGCTGCAGCCAATAGCTTGTACATGTACTACGCATAA

Peptide Sequence

PEP ID	Zm00001d044393_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:3:226945825:226954001:1 gene:Zm00001d044393 transcript:Zm00001d044393_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform
Sequence	MTMNGAAAPERSPPASPPPLVQAQAPPSPSPTQPLEWRFSQVFGERSAGEEVQDVDIISA IEFNKSGHHLATGDRGGRVVLFERTDVKDHASRKDAEKADYSISRHPEFRYKTEFQSHEP EFDYLKSLEIEEKINQIKWCQATNCALFLLSTNDKTIKFWKVQEKKVKKVSEMNLDRSTA PTNGSPGGTGYLRPSLSNGNVLKPGGLPLLRLPVVTTQETSLAASCRRVYAHAHDYHINS ISNNSDGETFISADDLRINLWNLEISNQSFNIIDVKPTNMEDLTEVITSAEFHPTHCNTL AYSSSKGSIRLVDLRQSALCDNHSQIFEQHEAPGSRSFFTEIIASISDIKFSKDGRHILS RDYMTLKLWDVKMNSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCQSGDGLRVATGSY SNIFRVFGCRSGSSEATTLEATRNPTRRQVQTTSRATRSLSTLTRAVRRGGESTGIDANG NSYDLSTKLLHLAWHPSENLIACAAANSLYMYYA

Transcript Sequence

Transcript ID	Zm00001d044393_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:226945825:226954001:1 gene:Zm00001d044393 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform
Sequence	GAGAGGAAAAGGGAAAATAAAATCGTTTTGGTTTCTTCCCTCTCCGTTGTCGTATCGGCG CGGCTGCCCCCACCACCTCCCCCCTCCATCTCGCTCTCGCTCTCGCTCCGCCCCTCTCTC CCTCTCTCATTGGCCATTCCGCCCGCATGAAACCCCAAACCCTCGCCGGCATCGCCGTCG CCGCAGCAGCGCCCGCGTAGCCCGCCCCTCTCGCCCTCGCCCCCCCTCCCCGCGCCCCGA TCCCGCCCGCTCCGCAGCCGATCCTGCCGGGAGCACGACCGATGACGATGAACGGCGCCG CTGCACCGGAGCGCTCGCCCCCAGCCTCGCCCCCGCCTCTGGTCCAGGCCCAGGCGCCTC CGTCGCCATCTCCGACTCAGCCGCTCGAGTGGAGGTTCTCGCAGGTGTTCGGTGAGCGCA GCGCCGGGGAGGAAGTCCAGGATGTTGACATCATCTCAGCAATAGAGTTCAATAAATCGG GACATCATCTTGCCACTGGAGACAGGGGTGGACGAGTTGTTTTATTTGAAAGGACTGATG TCAAAGATCATGCCTCTAGAAAAGATGCTGAGAAAGCTGATTATTCTATCAGCAGGCATC CTGAGTTTCGCTACAAAACTGAGTTTCAAAGCCATGAGCCAGAGTTTGATTACCTCAAGA GCTTGGAAATTGAAGAGAAGATTAACCAAATAAAGTGGTGTCAAGCAACAAATTGTGCAT TGTTTCTTCTATCCACAAATGACAAAACGATAAAGTTTTGGAAGGTCCAAGAAAAGAAAG TAAAAAAGGTATCTGAGATGAATTTGGACCGTTCAACTGCTCCTACAAATGGTAGTCCTG GTGGTACGGGATATCTGCGCCCATCTCTCTCAAATGGCAATGTTCTAAAACCTGGCGGAC TTCCTTTGCTACGCCTTCCTGTGGTTACAACCCAAGAAACAAGCCTTGCTGCGAGTTGCC GAAGAGTATATGCTCATGCACATGACTATCATATAAATTCAATATCAAATAACAGTGATG GTGAGACATTTATATCAGCTGATGATTTGCGGATAAATCTTTGGAATTTGGAAATCAGCA ATCAAAGTTTCAATATTATTGATGTTAAGCCTACAAACATGGAAGATCTCACTGAGGTGA TAACATCTGCTGAATTCCATCCTACTCATTGCAATACATTGGCGTATAGTAGCTCTAAGG GCTCCATTCGACTTGTTGATCTGCGGCAATCAGCCCTTTGCGACAATCATTCCCAAATCT TTGAGCAGCATGAGGCCCCAGGTTCAAGATCATTTTTCACTGAGATTATAGCTTCAATTT CGGACATAAAATTTTCGAAGGATGGGAGGCATATTCTCAGTCGTGACTACATGACTCTGA AGCTTTGGGATGTTAAGATGAATTCTGGTCCTGTTGCAACATTCCAGGTTCATGAGTATC TAAGGCCTAAGTTATGTGATTTATATGAAAATGACTCAATTTTCGACAAATTTGAGTGTT GTCAAAGTGGTGATGGATTAAGAGTAGCAACTGGTTCCTACAGCAACATTTTTCGCGTGT TTGGTTGCCGTTCTGGTAGCAGTGAAGCAACAACACTTGAAGCAACCCGAAACCCTACAA GGCGGCAGGTCCAGACTACCTCTAGAGCTACCAGATCCCTAAGTACTCTGACAAGGGCCG TTAGACGAGGTGGAGAGAGCACTGGAATAGATGCCAATGGAAATTCCTATGATCTGAGCA CAAAGTTGCTCCATTTGGCCTGGCACCCATCTGAAAATCTAATTGCTTGTGCTGCAGCCA ATAGCTTGTACATGTACTACGCATAAACAAGCGAAACGAACAGAGCGACAGTTTTTTTTT GTTGGTTGCTCCCGGTGAGAAAGACACGTTTAGCCAATGGTGGATTGAAGCCAGGAGTTG GTGGAGATGGTGTATTTTGTGCCAGTCGGAAGCAGTTCTTTTCGGTGCCATATAGAGCTG TCCAGAGTCCAAGAGGAAGTGACTCGATCATTCCCGGGAAGCAGCTTTGATTCTGATTAT TATTATTTTTTGTGTGGGGAAAGGCTTGTCTTTCCCCCATAGGTTCATTTAGATTTAAAT ATAAGGTCCTAGCTTGACAACATCTGGGCATCTGTAGTAGACGATGTTAAAGGGGATGGG TATGGCGACGATCCACCGTTGTATTCATGTTGCCATGGGTTTGTAACTTCAGGGTGGCCG TTGGAGCTTTTCATAGTTTTATCTTACAGATCGACCTTATTTTTTTTCCCTTGCGTGGGG AACCTTGTTTTCGAAGAATGCCAGGACCTTCGTCATGTTTGATGCGAACCCTAGAATAGG AAACATACTGTCATTTTATTGTATGTACATTTTTAATAGGTTGGAGTGGTTCTTCTGTTG T