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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d044389_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:3:226830874:226834275:1 gene:Zm00001d044389 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calcineurin B-like5 description: calcineurin B-like5
Sequence

ATGGGCTGTCTGCAAACAAAGCACGCCAGTCGATCGCCGCACTTGCTGGATACACGGGAA
GCTGTAGCCCTTGCTGCTGAAACATCTTTTACAGTGAGTGAAGTTGAAGCACTGCATGAC
CTCTTCCGGAAAATAAGTAATTCAGTTATCAGAGATAATCTAATTCACAAGGAAGAATTC
CAACTTGCTCTCTTTAGGGGCAAGAAGCAGCAAAATCTCTTTGTTGATAGGGTATTTGAC
TTGTTTGATCAAAAACGAAATGGTGTAATTGAATTTGGTGAGTTTGTTCGATCTCTTGGT
GTGTTTCATCCAGATGCACCAGAAGATCAGAAAGTTGCATTTGCATTTAAGTTGTATGAC
TTAAAACAGACAGGCTTTATAGAACGGCATGAGTTAAAGGAGATGGTGCTGGCTCTGCTG
GACGAATCAGATTTGGATATTGCGAGCGACGCTGTCGAGATGATTGTTGACAGGGCCGAC
ACAAAAGGTGATGGGAAGATAGATCAGGAAGAATGGACTGAATATGCTAAAGACAATCCA
TACGTGCTGAGGAATATGACCCTTCCATACCTCAAGGACATTACTATGGTATTCCCAAGC
TTTGTGATGCACTCAGAAATCAGTGAAACAGACATGGCTGTCTAA

Peptide Sequence

PEP ID

Zm00001d044389_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:3:226830874:226834275:1 gene:Zm00001d044389 transcript:Zm00001d044389_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calcineurin B-like5 description: calcineurin B-like5
Sequence

MGCLQTKHASRSPHLLDTREAVALAAETSFTVSEVEALHDLFRKISNSVIRDNLIHKEEF
QLALFRGKKQQNLFVDRVFDLFDQKRNGVIEFGEFVRSLGVFHPDAPEDQKVAFAFKLYD
LKQTGFIERHELKEMVLALLDESDLDIASDAVEMIVDRADTKGDGKIDQEEWTEYAKDNP
YVLRNMTLPYLKDITMVFPSFVMHSEISETDMAV

Transcript Sequence

Transcript ID

Zm00001d044389_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:226830874:226834275:1 gene:Zm00001d044389 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calcineurin B-like5 description: calcineurin B-like5
Sequence

GAGTTCGAACGAACCGACAAGAAGGAGCAATACACAAGAGAGAAGACAAGGAATAGCGCC
AGCGGCGGCCAGGGTGCCGCTCGATCTCTATGACTTGTTCTTCCCTCCCTTTCTTCCCTT
CACAAGGTTCCTGAGGCCCGCTTTGAGCTGAGATGGATTCGTCCCAGTAGTGTTCTGGGT
GCTCCCGTTTCTTGATTTCTTCCGAACTTAGGCATTACTGTTTACAGAATACGACCACAA
GATTCCGGACACTGTGTTTTGCTCTTCTCCGAGTTTGCACTTTGCTTGATATTCCATTTG
GAGGAGCTGCGATGGGCTGTCTGCAAACAAAGCACGCCAGTCGATCGCCGCACTTGCTGG
ATACACGGGAAGCTGTAGCCCTTGCTGCTGAAACATCTTTTACAGTGAGTGAAGTTGAAG
CACTGCATGACCTCTTCCGGAAAATAAGTAATTCAGTTATCAGAGATAATCTAATTCACA
AGGAAGAATTCCAACTTGCTCTCTTTAGGGGCAAGAAGCAGCAAAATCTCTTTGTTGATA
GGGTATTTGACTTGTTTGATCAAAAACGAAATGGTGTAATTGAATTTGGTGAGTTTGTTC
GATCTCTTGGTGTGTTTCATCCAGATGCACCAGAAGATCAGAAAGTTGCATTTGCATTTA
AGTTGTATGACTTAAAACAGACAGGCTTTATAGAACGGCATGAGTTAAAGGAGATGGTGC
TGGCTCTGCTGGACGAATCAGATTTGGATATTGCGAGCGACGCTGTCGAGATGATTGTTG
ACAGGGCCGACACAAAAGGTGATGGGAAGATAGATCAGGAAGAATGGACTGAATATGCTA
AAGACAATCCATACGTGCTGAGGAATATGACCCTTCCATACCTCAAGGACATTACTATGG
TATTCCCAAGCTTTGTGATGCACTCAGAAATCAGTGAAACAGACATGGCTGTCTAACCTG
AAAAGTAACTGCAAACTCACAGCTTCTCTGCACAGCCTGATGTATATTAATGATGGAACC
GGAATCTTTTCATCAAGAAAAGGTTAATTTGCAACCTTCTCTCGTGAACAGAAATTTGTG
GACTGGTGTAAATGGTGGGAATAGGAAAGGTGTTCTGTTATATTACCGACAAGCAAACGA
GCAATCTAGCATCTATCTGATTGTCGTTTTC