Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d044388_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:226768741:226770738:-1 gene:Zm00001d044388 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGGCGCTCTCCAAGCCTCTCCTCTCTCGCCTCCTCCCCCTTCCTCTCCGCCTACGTCCT CAGGCCCGCTTCCTCTGCCTCGCCACCCCGCCTTTGACCCCGACCCCCACCCAAATCGAC GACCAGCCACCCGCGGACGCCGCCGCCGAGCGCCGCCGCCGCAAGCGCCGCCTCCGCGTG GAGCCCCCTCTCTCCCGAGGCCCCGCGCCGCAGCGCGCGCCGGGGGCTCCCCGCCCCGCG TCAAACCCCAACGCGCCCAAGATCCCGGAGCCGGCCTCGGTGCTGTCGGGGAAGCGCCTC GACCTGCACCGCCGAATCCTCACGCTCATCCGCGAGAACGACCTTGACGAGGCGGCGCTC CTCACGCGCCACTCCATCTACTCCAACTGCCGCCCCACCGTCTTCACCTGCAACGCCGTC CTCGCCGCGCTGCTCCGCCAGGCCCGCTACGCCGACCTCCTATCCCTCCACCGCTTCGTC ACGCAGGCCTCTGTCGCGCCCACCGTCGCCACCTACAACCTCCTCCTTCAGGCCTACTGC GACTGCCGCCGCCCTGACGTCGCGCTTGAGCACTTCCGCCTCCTTCTCAAGGACGACTCG CCCGTGCTCCCATCCCCCACCACATACCGCATCCTGGCGCGCTCCCTCGCCGAGAACGGC AAGCTAGACCAGGCGCTCGAGCTCAAGGATGGCATGCTCGAGCGTGGCCTTATTGCCCCT GATACCCAGGTGTATGCCTTCATCATGGGTGGGTTTGTCAATGCCGGGGATGGGGACAAG GCAGTTTCGTTGTTTGAGGAGATCAAGGAGAAACTTGGCGGGGAGTCTATTCTTGATGGC GTAGTGTATGGCAACCTAATGAAAGGGTATTTTCTCAAGGGCATGGAGAAGGAGGCCATG GATTGCTATGCAGAGGTGCTTGGAGAGGGTTCCAAGGTGAGGTTCGGTGCTGTGAGCTAC AACATGGTGCTTGATGCACTTGGGAGGAATGGGAGGTTGGATGATGCACTCAACCTGTTT GATAGAATGTGCATGGAGCATGACCCGCCCAGGACAATCACTGTGAACCTTGGGAGCTTT AATGTGATGGTTGATGCATACTGCCGCGCTGAAAGGTTTCAAGATGCGATTGAGGTGTTT GGAAAGATGGCCGAGAAGAAGTGTGCTCCAGATGCACTCTCGTACAATAATCTGATTGAC TGGTTGGATGATGCGATTAAGGTCGCCAAATGTATCCTGTTAGATGAGAGTGTCGTCTTT AGTGATGAAACGAAAGCACTTCTGGAGGAGGCACTAGACAAAGAGGGTAGAAATGGGCAA ATGACAAAGTTATATGAAGATGTTGAGATGGAGAAAGCAGAGGCGGCTGCACGTGCAGCT GAAGAGAAGGCTAGAGCAGAGGCCCTTGCTAAAGAAGAAGAGGAGAGGAAGAAGGCCGAG GCAAAGGCTAAGGAAGAAGCTGCTGCCAGGGCTAGCCGAGCGGCTATTGAGGCAGTGCTG GGTCGCAAGAGGGAAGCAGAAAAACAGGAACCAGTTGATGGACTGAACGTTGAGGATGCA GAGGTTGTGGAATCCAAGAGTGACACCAGCGATGTTTCTGGAGAACAGAATGAAGGCGAT GAGCACAAAAAGCAAGAGCCGGCTGAAGCATCATCGTGTTCTTAG

Peptide Sequence

PEP ID	Zm00001d044388_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:226768741:226770738:-1 gene:Zm00001d044388 transcript:Zm00001d044388_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MALSKPLLSRLLPLPLRLRPQARFLCLATPPLTPTPTQIDDQPPADAAAERRRRKRRLRV EPPLSRGPAPQRAPGAPRPASNPNAPKIPEPASVLSGKRLDLHRRILTLIRENDLDEAAL LTRHSIYSNCRPTVFTCNAVLAALLRQARYADLLSLHRFVTQASVAPTVATYNLLLQAYC DCRRPDVALEHFRLLLKDDSPVLPSPTTYRILARSLAENGKLDQALELKDGMLERGLIAP DTQVYAFIMGGFVNAGDGDKAVSLFEEIKEKLGGESILDGVVYGNLMKGYFLKGMEKEAM DCYAEVLGEGSKVRFGAVSYNMVLDALGRNGRLDDALNLFDRMCMEHDPPRTITVNLGSF NVMVDAYCRAERFQDAIEVFGKMAEKKCAPDALSYNNLIDWLDDAIKVAKCILLDESVVF SDETKALLEEALDKEGRNGQMTKLYEDVEMEKAEAAARAAEEKARAEALAKEEEERKKAE AKAKEEAAARASRAAIEAVLGRKREAEKQEPVDGLNVEDAEVVESKSDTSDVSGEQNEGD EHKKQEPAEASSCS

Transcript Sequence

Transcript ID	Zm00001d044388_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:226768741:226770738:-1 gene:Zm00001d044388 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGGCGCTCTCCAAGCCTCTCCTCTCTCGCCTCCTCCCCCTTCCTCTCCGCCTACGTCCT CAGGCCCGCTTCCTCTGCCTCGCCACCCCGCCTTTGACCCCGACCCCCACCCAAATCGAC GACCAGCCACCCGCGGACGCCGCCGCCGAGCGCCGCCGCCGCAAGCGCCGCCTCCGCGTG GAGCCCCCTCTCTCCCGAGGCCCCGCGCCGCAGCGCGCGCCGGGGGCTCCCCGCCCCGCG TCAAACCCCAACGCGCCCAAGATCCCGGAGCCGGCCTCGGTGCTGTCGGGGAAGCGCCTC GACCTGCACCGCCGAATCCTCACGCTCATCCGCGAGAACGACCTTGACGAGGCGGCGCTC CTCACGCGCCACTCCATCTACTCCAACTGCCGCCCCACCGTCTTCACCTGCAACGCCGTC CTCGCCGCGCTGCTCCGCCAGGCCCGCTACGCCGACCTCCTATCCCTCCACCGCTTCGTC ACGCAGGCCTCTGTCGCGCCCACCGTCGCCACCTACAACCTCCTCCTTCAGGCCTACTGC GACTGCCGCCGCCCTGACGTCGCGCTTGAGCACTTCCGCCTCCTTCTCAAGGACGACTCG CCCGTGCTCCCATCCCCCACCACATACCGCATCCTGGCGCGCTCCCTCGCCGAGAACGGC AAGCTAGACCAGGCGCTCGAGCTCAAGGATGGCATGCTCGAGCGTGGCCTTATTGCCCCT GATACCCAGGTGTATGCCTTCATCATGGGTGGGTTTGTCAATGCCGGGGATGGGGACAAG GCAGTTTCGTTGTTTGAGGAGATCAAGGAGAAACTTGGCGGGGAGTCTATTCTTGATGGC GTAGTGTATGGCAACCTAATGAAAGGGTATTTTCTCAAGGGCATGGAGAAGGAGGCCATG GATTGCTATGCAGAGGTGCTTGGAGAGGGTTCCAAGGTGAGGTTCGGTGCTGTGAGCTAC AACATGGTGCTTGATGCACTTGGGAGGAATGGGAGGTTGGATGATGCACTCAACCTGTTT GATAGAATGTGCATGGAGCATGACCCGCCCAGGACAATCACTGTGAACCTTGGGAGCTTT AATGTGATGGTTGATGCATACTGCCGCGCTGAAAGGTTTCAAGATGCGATTGAGGTGTTT GGAAAGATGGCCGAGAAGAAGTGTGCTCCAGATGCACTCTCGTACAATAATCTGATTGAC TGGTTGGATGATGCGATTAAGGTCGCCAAATGTATCCTGTTAGATGAGAGTGTCGTCTTT AGTGATGAAACGAAAGCACTTCTGGAGGAGGCACTAGACAAAGAGGGTAGAAATGGGCAA ATGACAAAGTTATATGAAGATGTTGAGATGGAGAAAGCAGAGGCGGCTGCACGTGCAGCT GAAGAGAAGGCTAGAGCAGAGGCCCTTGCTAAAGAAGAAGAGGAGAGGAAGAAGGCCGAG GCAAAGGCTAAGGAAGAAGCTGCTGCCAGGGCTAGCCGAGCGGCTATTGAGGCAGTGCTG GGTCGCAAGAGGGAAGCAGAAAAACAGGAACCAGTTGATGGACTGAACGTTGAGGATGCA GAGGTTGTGGAATCCAAGAGTGACACCAGCGATGTTTCTGGAGAACAGAATGAAGGCGAT GAGCACAAAAAGCAAGAGCCGGCTGAAGCATCATCGTGTTCTTAG