Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d044379_T009
CDS Infomation	cds chromosome:B73_RefGen_v4:3:226477249:226480603:1 gene:Zm00001d044379 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASC3/Barentsz eIF4AIII binding
Sequence	ATGAAGATGGATGATAACTCAATATTACAATCTGGTTCAATGGTTAGAGGGAGAACAGCC ATGGATTATGGTGGGCGTGATAGGTTTCATGCTGATGGTCCTGTTAGGTCATCCCTTGGA AGGGTGCCAACGGCGTCACTGAATTCAGGATTTACATCATCATTGGTAAATCCTAGCCAA TCCACTATTGTCCGGGCTTCAGGGGGCAATTCAAACATTGGAATATCTTCAAATAATCAG CCACAAAGTCATGGACCAGTGATGCACCAGAAGTCAATGCAAGTGCAGAATCAGTCTGCA GCAAGAATTCCAACTCAGCAATTGAGCCATCGGACTAACAATTCATTACCAGCAGCTCAG CATCTATCTGTTAAATCAACAGAAAGTGGCGAGAATGGTTCATACCCTAGTCTGAACAAT TCAAAGACAGCTTCTGCAGTGGTAAAAGCCAATAGCCAGGAAACTGGAATGGATTCATTG ATGTATGGTGGTGCCCAAGTTATTGGGGCTGCTGGTCTTTCCCAGGGAGATCAAAATTTT CCTGGCACTCCAGCTTTGCTGCCAGTGATGCAATTTGGGGGTCAGCATCCTGGTGGTCTT GGAGTTCCTACTGTTGGTATGGCCCTCCCTGGCTATGTATCTCAACAGCAGATGGGAATG GGAAACAATGAAATGGCATGGTTGCCATTATTGGCTGGTGCTGCTGGTGCTTTTGGAGCA TCATATCCACCATATATAACTCTTGATCCGAGTTTTTACTCCAGGTCTCCAGGACAGACA TCATCATCAGTTCCATCCAGGGAACCTAGTGCTAATAGAGGGTCTAAATCTCCTCCTCGA AATGATATTGGAAATGAGGAGCTTGATCAGCGCCAGAACAAACCTAGGAGATACTCAGAG ATGAACTTCAGCCAGTGA

Peptide Sequence

PEP ID	Zm00001d044379_P009
PEP Infomation	pep chromosome:B73_RefGen_v4:3:226477249:226480603:1 gene:Zm00001d044379 transcript:Zm00001d044379_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASC3/Barentsz eIF4AIII binding
Sequence	MKMDDNSILQSGSMVRGRTAMDYGGRDRFHADGPVRSSLGRVPTASLNSGFTSSLVNPSQ STIVRASGGNSNIGISSNNQPQSHGPVMHQKSMQVQNQSAARIPTQQLSHRTNNSLPAAQ HLSVKSTESGENGSYPSLNNSKTASAVVKANSQETGMDSLMYGGAQVIGAAGLSQGDQNF PGTPALLPVMQFGGQHPGGLGVPTVGMALPGYVSQQQMGMGNNEMAWLPLLAGAAGAFGA SYPPYITLDPSFYSRSPGQTSSSVPSREPSANRGSKSPPRNDIGNEELDQRQNKPRRYSE MNFSQ

Transcript Sequence

Transcript ID	Zm00001d044379_T009
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:226477249:226480603:1 gene:Zm00001d044379 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASC3/Barentsz eIF4AIII binding
Sequence	TAGTGAGAGGGAGGGGACCTCGACGTTATGAAGCTGTTGCAAGGAGCAGCAGAGAGGTTG TTGGATCCCAACGAAAGCAAGCAGCTAGATTTCGAGAGCCTGTTCCAAATGCTGCAGCAG CCAGAAATTCTGGTCAAGTTTCACATGCACAACAAGAGGCTGCTCCTCCCAAAAAGAATG TCATCAGCTCAAGCCTGAATTCTGCATCCCCTCCATTTTATCCCTCTGGTGCAGCTTGTC AAGATTTTCCGGTAGCAACTCAGAGGAGAGACATACAAACAGGAGGTTCTAATAAGATTC CTCCATCTTCCATGAAGATGGATGATAACTCAATATTACAATCTGGTTCAATGGTTAGAG GGAGAACAGCCATGGATTATGGTGGGCGTGATAGGTTTCATGCTGATGGTCCTGTTAGGT CATCCCTTGGAAGGGTGCCAACGGCGTCACTGAATTCAGGATTTACATCATCATTGGTAA ATCCTAGCCAATCCACTATTGTCCGGGCTTCAGGGGGCAATTCAAACATTGGAATATCTT CAAATAATCAGCCACAAAGTCATGGACCAGTGATGCACCAGAAGTCAATGCAAGTGCAGA ATCAGTCTGCAGCAAGAATTCCAACTCAGCAATTGAGCCATCGGACTAACAATTCATTAC CAGCAGCTCAGCATCTATCTGTTAAATCAACAGAAAGTGGCGAGAATGGTTCATACCCTA GTCTGAACAATTCAAAGACAGCTTCTGCAGTGGTAAAAGCCAATAGCCAGGAAACTGGAA TGGATTCATTGATGTATGGTGGTGCCCAAGTTATTGGGGCTGCTGGTCTTTCCCAGGGAG ATCAAAATTTTCCTGGCACTCCAGCTTTGCTGCCAGTGATGCAATTTGGGGGTCAGCATC CTGGTGGTCTTGGAGTTCCTACTGTTGGTATGGCCCTCCCTGGCTATGTATCTCAACAGC AGATGGGAATGGGAAACAATGAAATGGCATGGTTGCCATTATTGGCTGGTGCTGCTGGTG CTTTTGGAGCATCATATCCACCATATATAACTCTTGATCCGAGTTTTTACTCCAGGTCTC CAGGACAGACATCATCATCAGTTCCATCCAGGGAACCTAGTGCTAATAGAGGGTCTAAAT CTCCTCCTCGAAATGATATTGGAAATGAGGAGCTTGATCAGCGCCAGAACAAACCTAGGA GATACTCAGAGATGAACTTCAGCCAGTGAAGCATCTTGTAAGGTGAACTGCATCTGAATA AGCTGCTTATGGTTAGTTACATGTTTCTTATATTGTCTAACTTCTTTTTTTTCTGTGGTT AAACTTATCTGTAGCTTTTCTAATATGCAGGCCCTATTTAGGCCCTTTGTGATCTCCAGT TCTGATCTGGAGCACTTTGGGTGGCTTTGGTATCCTTACTTATGTTAGGT