Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d044358_T011
CDS Infomation

cds chromosome:B73_RefGen_v4:3:225847968:225863873:-1 gene:Zm00001d044358 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of telomere elongation helicase 1

Sequence

ATGTTAGACATAATTTTTAGGGGTGGTGGTCAAAACCATGCAAAATATTATCGATTTCAT
GTGAACGAATCTCAACAAACACATGGAGATGCATTGAAATTTTTGGGTAAGTCTTCAAGG
ACCCTTAGTTGGTGGTGTTTCAACCCGGGGCTGGCGATGGAAGAATTTCTCAAGTTGGGT
GTGCGCTCTATCATATTAACCTCAGGCACCTTGTCTCCGTTGGATTCACTAGCCATGGAA
CTAAACCTTTTTGCTGACATATGTGCTCATTTTATAGTAAATTTCGCACGCATTGTGCCA
GACGGACTCCTTGTTTTCTTCCCTTCATATTCTATGATGGACATGTGTGTTGACTTCTGG
AAAAATAGGAACCATTCAAATTCAGCGTCTGAGAACACAATTTGGCAGCGGATCTGTAAG
CACAAGCAGCCAGTTATAGAGCCTAGGCAGTCATCAAACTTTCAGAGTGCAATTGAGCTT
GATGACCTGGGACTGTGCCACAGTACCTTCCAGTTGTCGACGTGTGTTGCAGCGCAGGAG
CCACCAGTTTTCTCACGTGCCGGAGCTCGCCTGGAAGACAAGCCCCAGCAGAGTGGGCCT
TGGGCTTGGACTTCAGGGAGAGTGTGGGGATTCACAGGATTCATGGCTGCAAGCCATTCA
TTGGAAGGGGTGGAGATGAGAAGTGATTGGATTCAAATGGGAAGATTCTCCTTTTACAAA
AGCTGGCTCATTGTTAGTGAGGGTCTTGATTTTGCTGATCGTGCTGGGAGGGCAGTAATA
GTTACTGGAATGCCCTTTGCTACTCCAACTGATGCCAAGGTTCGGCTCAAGCGCGAGTAT
TTGGATAAGCAGGGGACACCATCTAATAAAAACACAAAGATGTTGACAGGAGAAGAATGG
TATGTGCAACAAGCAGCACGGGCTGTCAATCAGGCTGTTGGACGTGTTATCAGACATCGC
CATGACTATGGAGCTATTATTTATTGTGATGAAAGGTTTGTGTGGCCAAATTATCAATCT
CAGATGTCATATTGGCTCCGACCTCATATAAAGTGCTACTCAAAGTATGGGGAAGTAGTC
CAAGGATTGACCCGATTTTTTCGAGATAAAGCTTCTTCAGATCCTTTGACACTAGAGCCA
ACAGATTGTAATACTTATGTGTTAGCTGGCATATTGATGCTAGTTGATGTCAAATTTTTC
TTAGAAGTCCCAGGGGATAAGGGAATAGTTGATTCATTGGGCCACCAAATTGATGACCCT
GTGGGCTTTACACCGCCAAGGCATGGAGAATCTGCTAGTGCATCATTACAATCGAAATGC
CATTTGTAG

Peptide Sequence

PEP ID

Zm00001d044358_P011
PEP Infomation

pep chromosome:B73_RefGen_v4:3:225847968:225863873:-1 gene:Zm00001d044358 transcript:Zm00001d044358_T011 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of telomere elongation helicase 1

Sequence

MLDIIFRGGGQNHAKYYRFHVNESQQTHGDALKFLGKSSRTLSWWCFNPGLAMEEFLKLG
VRSIILTSGTLSPLDSLAMELNLFADICAHFIVNFARIVPDGLLVFFPSYSMMDMCVDFW
KNRNHSNSASENTIWQRICKHKQPVIEPRQSSNFQSAIELDDLGLCHSTFQLSTCVAAQE
PPVFSRAGARLEDKPQQSGPWAWTSGRVWGFTGFMAASHSLEGVEMRSDWIQMGRFSFYK
SWLIVSEGLDFADRAGRAVIVTGMPFATPTDAKVRLKREYLDKQGTPSNKNTKMLTGEEW
YVQQAARAVNQAVGRVIRHRHDYGAIIYCDERFVWPNYQSQMSYWLRPHIKCYSKYGEVV
QGLTRFFRDKASSDPLTLEPTDCNTYVLAGILMLVDVKFFLEVPGDKGIVDSLGHQIDDP
VGFTPPRHGESASASLQSKCHL

Transcript Sequence

Transcript ID

Zm00001d044358_T011
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:225847968:225863873:-1 gene:Zm00001d044358 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of telomere elongation helicase 1

Sequence

GTGGTTCAGCAACGCCGAAGAAAAATCAGACAAGAAGCCCCTCCGGCCCTCGCCCTCCCT
AGTCCCTATTCGCCGCGCCCGCGCCCGCGCCGTCTCGAGGTCCGCCGGTCTCCTTCCGCC
GCAAGCTTTGCTCCATTCCACCGCCGCCTCTTCCGCCTCCGTCGGCAAAATGCCGGTCTA
CAGCATCCGCGGCGTCAACGTCGACTTCCCCTTCGACGCCTACGACTGCCAGATCACCTA
CATGGACCGCGTCATCGAGTCCCTGCAACAGGGGAAGAACGCGCTGCTGGAGAGTCCTAC
GGGTACGGGGAAGACACTGTGCCTGCTGTGTGCGTCGCTCGCGTGGCGCCGCACTTTCGG
CGAGTTCCTGCGGGTCGGGCGTGGGGGCGGTGGGACTAAGCAGTTGCCCTACGGGAGTCA
GCCGTCCGCTAGCCAGCAGTCAGAGGACTCTACGTCTCAGAAGCAGCAGCAGTCGCGGTA
CCCAGTCATCATCTACGCCTCACGGACCCACAGCCAGCTTCGGCAGGTTATCAAGGAGCT
CAAGGCTACCAGCTACAGGCCGAAGATGGCAGTGCTAGGTTCCCGTGAGCAGATGTGCAT
CCACGACGAAGTGAGCAAACTCCATGGAAGAGCACAGAACAATGCCTGTCACTTCCTCTG
CAAGAAACGACGGTGCCCTCATAATAACCATGTTGCTGAGTTCATAAAAAACAAACCTGA
GCTTGGGAATGAGCCTTTTGATATAGAAGATTTGATAAATATTGGGAGGCATAAGGGCCC
GTGCCCATATTACATCTCCCGGGAACTTTCAAAGTCGGTTGATATTTTGTTTGCCCCTTA
CAACTATCTTATTGATCCGGGAAACCGTCGTTCCCTAAATGGCATACCATGGGACAATGC
AGTACTTATATTTGACGAAGCACACAACTTGGAGAGTATATGTGCAGATGCAGCCTCTTT
TGATTTATTTCCGAATAACCTCACAGCTTGCATAGCGGAAGCTCATGAATGCATCAAACT
GTGTTCAGCAAAGAGGTCCATTGAAAATTCTGCTGATAAACAATTTGATCCTGAAAACTA
TGCAATCCTCAAAGCTCTTTTAATGGCACTTGAGAAAAAAATTGCTGAGCTGTTAATTGG
ATCCGAGTTGGGCTACACAAAAGCTGGGAGTTACATATACGATTTTCTCTCTGAACTGAA
CATTACATCAGACACATCCAAAAAACTGATTGAGACAATTGATTGTGCTTCTTTGCTACT
AGAGGAAGGTAACTGATTTTTTTGTTATTATTATTTCATTGTAATACACTAATATTCTTG
ATAATTAGGTAGATCAAAGCTGTCCATTTTTTGCAGCTCGATTGTGTTGAACACAATAAC
TTTTACTAAATATCTGGATGGTCAGTGCAAAGTAGTTCAATAACTATTTTTTTCTCAAAC
ACACAGGAGAACTATGTATTGTATTAAGAAGGAAAACACCCACCCACAAACCCTTCATTA
AAAAAAAACATACACGCCCTTTTCGTCCAACAAACATGGCCTTGGCCAAAACTACAAACT
AAACACCTATTTGTTGTTGGCCATGCCCTTTTCGTACAACAAACACGACCTTGACCAAGA
CTAGAAACTAAACATCTATTGGTTACTGGCCAGCTCCAGGGCAAGAAGGAAAGATAAGCT
TTGACCCCCACCAATCATCCCTACAAATGCAGACAAGGCTCCATTCAAGTTGGGAGACAT
GCCATCACACATCAACTGTGATAATTCCAAATCATCCAAGCTCTAATTATTATTACCGAA
TTCAGCCCCTTCCTAGCCATGTCAGCCACTCCCAACTCCACTTTAGCCTATCAATCGTCA
AAGGAGATTTCATCTTGTTGCAGAGAAAGATCGTTTGGTCCAATTTTGTGCAAAAGATGA
ACCTTGCCGAGCAAAGCTGGAAGAGACGAGCAGACGATTAATCGTCTCCTCCTGGTTACA
AAGGGGTTAGCCAGCTGGATGCAGGAGACCATGGTGTGCCAACCGATGAGTGATCCAGCA
TCTATTATGGCAACAACCACATGAATAAGTGACAAATCCTGAGTGCTCATGCTTTCCAAA
TCTGTTCCCATGAACTGTAATTGATAGAGCCAAGGAAGAAGCCCATGCAAGCTGATTTAG
CTGAGTACTGTTCAAAGGATGAAAAGCGGCAGACCCCTGTTTTCAAGTCGTCGACTAGTC
GGCGACTAGTCGTCCAGTCGGTCCTGGGAGCTCGACTTTTCTAGCAAGTCGGGTGACTTG
TCAACGACTGGAAATTCTCAGTCGACTAGTCGTCGACTTGGTCTGCCAAGTCGACCGACT
TGTGCCCCAGTTCAGCCCAAACAGCCCAAAGGTCCATTACACAACATTTTTTCTTGATTT
GGGAGAAAATGCAATGGATGATCTTGATTTGGGAGATATTTAGGGTATCTACTATGATAC
TATCTAGTATCTATCTAGCTGCAGCAGCAGCTTAGCTATCTAATGGAGCTTATTTCCTTT
CAAGTTTGAACTATATTTTTTTGCTATTTGTTTTCCAATTTGAACTATATGGCTGTTATG
ACTTATGAGTTTATGACTTATCACTTATGTGGCTGATTTGGTTCAGTTTGAGGCTTCAAA
TGAGGTAAGACTTGCTATTTATTTCAATTTCGTTCAATTTCAGGCTTCACATGAGGTAAA
ACATGCTCTTTCTTCATATATAAATGCTATATTGTCTATATGAAGCCATTATATAGGCAA
AACAGCCACTATATTGGCAAGTCGACGACTAGTCGACTGACTTATCGACTAGTCACCAAG
TCGGTACCTTGTCGACTCGACTCGACTTATCGACTTGAAAACCTTCAGACATAGGAAATC
CTCCACACTAGGCGGCAAGACAACCTCCGCAAGAATATCCTGCAATTTCATAAATTCAGC
AATAACACCTGTTAGTTTCCTGGATATCAGAAGTTCAGCCATGACTGGTGAGGGTCAGTC
CTCTTGTTTCCCCTAGTGGCGGATCTAGAAAAATTTACTAGGGGGTTAGGCGCTGAGCTT
ACAAAGGCATTAGAGGCTTTGTCCTTCTCGCAAGTGCAAAAACTCACGGAGCAAGATGAG
CAACTTGCTGCCCATGTATCCATCTATCTGTCCAAAAAATTGTAGTAGCACCATCTCCAA
TTTCTGAAAATATTGCTATGGAAAAGAAGGCCTTTACTGAGTTATGAACTTGGATAGGAA
ACACTAACTGTTCTATTCTCAATTTTTGGTAAGCAGTTAAGCACAACCATCTCATATGAA
AGGTCTGTTTGGTTCTGCCGTGAGTTGTAAAAAATCTGCTGATATGTGCTGTGGGAAAAC
TGTAAGCTATTTGGTTGAAACAACTATGAATACTACCCCTTCTATCTCCCTTGAAACAGC
TGTGAAACGTCTCTCTATTTCCACCCATTTGGAAAAGCAGAAAGCCAAAAGTAGGGTCCA
AAATGTTGCAAAAATTATACTACGCAAAATAAGCCGCTTCTGAAAAGCAGCTTCAGGTTC
AGCTTGTTTGGTTGGCATTCTGCTTTTCGGCAGCTCCAGAAGCTGAACCAAACATAGCTG
GAGTGCCCATCCAAGTATTTGCAAGTAAGAGATATTGAGCACACCATACTCTTGGAGGAC
AGAAGACTTTTGTCCATGCCATCAAACAATGGCCATCCTTTGCATCCTTACGCCCTTTCC
CAAGAGAGCTTCTTGTAATCTTATAAATGGCCTAAGCCCATGGTGGGAGGTCTAAAGCCA
TTGCAAGATAGATCAAAGTGGAAGTGAGCACAAACTGAACAAAAATACGTCTCCCAGCCT
GTCTTGATAGTTTGCCCTCTAGCCGGTAGAAGGCAAGCAATTTTATCAATTAGAGGCTGT
AATTGTGCTCTGGTTGATTTCCTCAAAGATAAGGGAATACCAAGGTACCTACAAGTTACA
AGGGAAATTGAGCACCTCACATGGCTGCTTTTCTTTCACAACAAGAATATCCAATTTCGA
GCTCTGGATAGGAAACACATTGCTCTTCTACACATTGGTTTTGAGAACAGATGCTTCACC
AAAATAAACAAATGATGTCCACGGTTATCTCTATCTGGCTGTGGGCAGGAGGAAAACAAC
AAAGTCATCTTTATATAGAGAAATCCTATGCGGTAAGGCATGTGCAGCAAGGGGTTGTAG
GCTCCCCTGACTGGAAGCCAAAGGCCAAAGTCACCATATGCCCAAGGATTTCGATTACAA
GAGTAAATAACATAGGTGATAATGGATCACCTTGCCGCAATGCTTGCTGGTGTAAGATAA
CATCAACATGGATCCCATTCTGTAGCACCTATGTTGAAGATGATGCTAAAAGCCCACTGT
TAATATAACACCAAATAACCCCAAAACTGAGCTTTCTCAATATTTCAAGGAGGAAGGGCC
AAGACATTGAACCGAACGCCTTTGTGATGTCTTAACTTCAGGAGAAGGTGGGGCTGTTTT
TGCTGATGAGAAACTTGCTTATAGGCCGCCTAAAGTCCTTGACACGTCCTATCCTTCTAG
ACAGAAGAGTGACATTTGCTGTGTTAAGTGCTTCCATCGTCCTGAATTTTCTGCTCCAAA
CTGCTGAAATGCAGCCATACTATTCTGTTTTAACTTTTGTTCTGTTCCTGCATATTTAGG
AAATTCTGCTCAAACTGGGCCAGGGGTCCAGGCAAAGGCTGCAGTGTCTAGATTGGAGTC
AATTAGGGACATGTTAGACATAATTTTTAGGGGTGGTGGTCAAAACCATGCAAAATATTA
TCGATTTCATGTGAACGAATCTCAACAAACACATGGAGATGCATTGAAATTTTTGGGTAA
GTCTTCAAGGACCCTTAGTTGGTGGTGTTTCAACCCGGGGCTGGCGATGGAAGAATTTCT
CAAGTTGGGTGTGCGCTCTATCATATTAACCTCAGGCACCTTGTCTCCGTTGGATTCACT
AGCCATGGAACTAAACCTTTTTGCTGACATATGTGCTCATTTTATAGTAAATTTCGCACG
CATTGTGCCAGACGGACTCCTTGTTTTCTTCCCTTCATATTCTATGATGGACATGTGTGT
TGACTTCTGGAAAAATAGGAACCATTCAAATTCAGCGTCTGAGAACACAATTTGGCAGCG
GATCTGTAAGCACAAGCAGCCAGTTATAGAGCCTAGGCAGTCATCAAACTTTCAGAGTGC
AATTGAGCTTGATGACCTGGGACTGTGCCACAGTACCTTCCAGTTGTCGACGTGTGTTGC
AGCGCAGGAGCCACCAGTTTTCTCACGTGCCGGAGCTCGCCTGGAAGACAAGCCCCAGCA
GAGTGGGCCTTGGGCTTGGACTTCAGGGAGAGTGTGGGGATTCACAGGATTCATGGCTGC
AAGCCATTCATTGGAAGGGGTGGAGATGAGAAGTGATTGGATTCAAATGGGAAGATTCTC
CTTTTACAAAAGCTGGCTCATTGTTAGTGAGGGTCTTGATTTTGCTGATCGTGCTGGGAG
GGCAGTAATAGTTACTGGAATGCCCTTTGCTACTCCAACTGATGCCAAGGTTCGGCTCAA
GCGCGAGTATTTGGATAAGCAGGGGACACCATCTAATAAAAACACAAAGATGTTGACAGG
AGAAGAATGGTATGTGCAACAAGCAGCACGGGCTGTCAATCAGGCTGTTGGACGTGTTAT
CAGACATCGCCATGACTATGGAGCTATTATTTATTGTGATGAAAGGTTTGTGTGGCCAAA
TTATCAATCTCAGATGTCATATTGGCTCCGACCTCATATAAAGTGCTACTCAAAGTATGG
GGAAGTAGTCCAAGGATTGACCCGATTTTTTCGAGATAAAGCTTCTTCAGATCCTTTGAC
ACTAGAGCCAACAGATTGTAATACTTATGTGTTAGCTGGCATATTGATGCTAGTTGATGT
CAAATTTTTCTTAGAAGTCCCAGGGGATAAGGGAATAGTTGATTCATTGGGCCACCAAAT
TGATGACCCTGTGGGCTTTACACCGCCAAGGCATGGAGAATCTGCTAGTGCATCATTACA
ATCGAAATGCCATTTGTAG